ChIP-Atlas: Target genes

Potential target genes for Hoxd9

Query protein: Hoxd9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Hoxd9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Hoxd9's Target genes

◣ Hoxd9: Average

◢ SRX7416187: Embryoid Bodies

◢ SRX7416188: Embryoid Bodies

◢ Hoxd9: STRING

Prdm13
Hoxc6
Hoxc5
F11r
Hoxa4
Map4k5
Atl1
Gpr84
Slc37a3
Notch1
Pcnx3
Map3k11
Ngdn
Synpo
Atp1b4
C1ql3
Hoxb4
Hoxb3
Hoxd3
Zfp503
Rnf165
Zfp473
Vrk3
Sptssa
Hoxc4
Tmem268
Hoxb5
Ccdc182
Hdx
Rbm25
Arfgef1
Otp
Gm973
Mmrn1
Elf5
Hoxa2
Hoxa1
Nkx2-2
Crb1
Lpgat1
Icmt
Hes3
Nkx6-1
Hoxa6
Hoxa5
Gcnt2
Hoxa3
Rab30
Zadh2
Tshz1
Slc5a12
Baalc
St3gal2
Csrnp3
Dph5
Khdc4
Mbnl1
Clasp2
Irx1
Sqor
Gpc6
Scn1a
Slc9b2
Gnat3
Crlf2
Trio
Tcstv3
Tlk1
Mllt3
Wt1
Cox7a2l
Hoxb6
Rab27a
Epha5
Osbpl9
Tshz3
Pitpnc1
Ttll11
Crp
Kmt5c
Foxp2
Cux1
Ccdc174
Slc31a2
Oxnad1
Dph3
Tmem156
St8sia2
Apcs
Nkx2-9
Foxn3
Phox2b
Rara
Map4
Arhgap28
Pdlim5
Elmo2
Cemip2
Plcd3
Acbd4
Mecom
Hhip
Hsdl2
Ccnd1
Stox2
Wdr7
Ccn1
Gfra3
Vta1
Zfp330
Gm4737
Ascl1
Olfr646
Vamp9
Cmtr1
Egr2
Gm4791
E4f1
Prdm6
Hoxb8
Hoxb7
Hand1
Dnm2
Rnf220
Neurod4
Tmem97
Cdca8
9930104L06Rik
Rhbg
Adipor2
Tnfsf13b
Sumf1
Trib2
Stxbp6
Ntn1
Gask1b
Lysmd3
Ptprd
Lyrm9
Wdr18
Zfp945
Kbtbd13
Glrp1
Mad2l2
Draxin
Lemd2
Th
Got2
Olfr298
Itch
Col4a2
Col4a1
Poc5
Pcnx
0610009B22Rik
Acot1
Aff3
Oacyl
Vapb
Fam174a
Actn4
Phgdh
Sgpp1
Ermn
Rabl2
Atg4c
Galk2
Cops2
Skida1
Fam181a
Pdia5
Zfp143
Tob1
Phactr3
St8sia4
Lmbr1
Rnase12
Rnase11
Cfap58
Galr3
Fyn
Nacc2
Mycl
Eif2s3x
Tti2
Slc9a9
Gm15517
Hnrnpa1l2-ps2
Mutyh
Sox6
Fzd8
Aktip
Zfand3
Tnrc18
Skil
Tbc1d10b
Mylpf
Srgap3
Slc7a1
Lrrtm2
Krt9
4430402I18Rik
Scube2
Smad1
G2e3
Pth1r
Lta4h
Poglut3
Phpt1
Mamdc4
Ajm1
Cyp19a1
Radil
Hoxa7
Bend4
Sall4
Nol4l
Cntnap2
Nudt1
Mrm2
H4c8
H2ac10
Pax8
Ric8b
Cryzl2
Atg2a
Mthfd2
Fbxw7
Krt222
Copz1
Ppp1ccb
Rps23
Meis3
Men1
Cnr1
Etv3
Zc3h12c
Ndnf
Megf10
Chst12
Ttr
Tmem255a
Fmo2
Ech1
Tom1l2
Pum1
Drc3
Tmem132b
Hhat
Wnk1
Ccdc33
Asic4
Dynll1
Kcnk4
Ttc1
Tcerg1
Thrb
Drd2
Rabep2
Tle3
Mbp
Rragd
Cldn34d
Pik3r4
Pla2g2d
Dip2b
Myo10
Zc4h2
Ncam1
Ss18l2
Med25
Fuz
Chchd5
Lrrn3
Sf3a2
Plekhj1
Tpm3
Hibadh
C1qtnf4
Vmn2r23
P4ha3
Cyp2s1
Cd83
Cbfa2t3
Spata7
BC051142
Tcim
Psd3
Flrt1
Trim23
Trappc13
Shld3
Cda
Celf3
Cachd1
H6pd
Pou3f3
Smarcal1
Zfp41
Tnks2
Ajuba
Ppp2r2a
Mrpl33
Evi5l
Slc25a42
Sema6b
Fmc1
Dusp5
Bbs2
Nrg1
Nup107
Cnot3
Slc4a8
Ppp3ca
Chrna4
St6galnac1
Lrrcc1
Ift46
Akap6
Emcn
Mapk9
Tox2
Asf1b
Ubqln2
Spen
Ing3
Caml
Slc27a4
Pacrgl
Man1a2
Setd4
Cbr1
Purb
Cad
Txndc11
Lin28b
Rab18
Mfng
Zdhhc2
Utp4
Snca
Rhob
Derpc
Chtf8
Atp5g2
Arpp21
Kbtbd8
Vps29
Sec22c
Rad9b
Muc6
BC107364
Spp2
Xpr1
Ptger2
H4c2
H4c1
H3c1
H1f1
Dbx2
Garre1
Vps41
Esrrg
Pex2
Ubp1
Zfp628
Gja10
Vkorc1
Prss53
Tph2
Nsg2
Scmh1
E130308A19Rik
Zkscan1
Dus1l
Lpar4
Itgb8
Tjap1
Gm14092
Ppp1r15b
Rag2
Pik3r1
Iftap
Angpt4
Mnx1
Ell
Rora
Marveld3
Aven
Map6
Rnf44
Gfod1
Ccdc154
Nme6
Josd1
Gtpbp1
Gbx2
Ifna9
Nr3c2
Eppin
Mrps36
Gucy1a1
Ccbe1
Phc2
Asap1
Nr4a2
Lpo
Kansl1l
Stk33
Mapre1
Agfg1
Mrps33
Osbp
Pyroxd1
Hes1
Add2
Tbc1d9
Ythdf3
D630045J12Rik
Abca7
Sos1
Zfpm1
Postn
Atic
Grpel2
Enpp3
Emp3
Fzd3
Fbxo16
Atp6v1g1
Znrf4
Mybpc1
Lrrc4
Aqp8
Adcy2
Zswim5
Mfsd10
Repin1
Gm5111
Gpn3
Fam216a
Rprml
Sertad4
Pfas
Ctc1
Tbl1x
Alkbh5
Coq7
Pou3f2
Ccdc60
Tex14
Lama5
Tshz2
Barhl1
Nebl
Tmem178b
Pakap
Gcc1
Sema6d
Dipk1a
Elavl4
Dhx16
Adtrp
Lrrfip1
Fbxw15
Traf1
Srpk2
Aebp1
Wdr6
Zfp672
Ormdl3
Gtf2ird2
Cd9
Nell2
Mvb12a
Sh3bp5
Mob3b
Ifnk
LTO1
Dpt
Abr
Sc5d
Ksr1
Prdm10
Syt2
Hmox1
Kcnip2
Wdyhv1
Sdhaf1
Prickle1
Fam135b
Kif21a
C1qc
C1qb
Rgs5
Gab2
Dnajb2
Bmp7
A630095N17Rik
Primpol
Casp3
Nms
Hoxa9
Ehbp1
Trrap
Hsp90b1
Wbp11
Mia3
BC049715
Il5ra
Nedd9
Fgd4
Zfp689
Snap25
Cnot2
Slc25a25
Naif1
Fer
Tgif1
Lhpp
Zdhhc16
Exosc1
Ankrd40
4930550C14Rik
Ankrd6
Nrxn1
Dbx1
Slc38a2
Olfml1
Eef1akmt1
Crmp1
Vdac2
Ogfod3
Mrfap1
Hexdc
Plaa
Fbxw25
Dnajb5
Crybg3
Spred3
Narf
Ggn
Marchf10
Dcaf11
Rufy3
Dhrs7b
Eif3c
Grrp1
Kmt5a
Nr2f1
Fgfrl1
Cntf
Rab28
Elavl2
Rack1
Dad1
Cables1
Abhd4
Hpgd
H2bc6
H1f4
Nop53
Schip1
Rbm5
Actr3b
Nr2f2
Kbtbd6
Apela
Rtcb
Pbx1
Rarb
Zfp334
Nrp2
Nr4a3
Casp7
Sall1
Lrrc2
Gm14137
Gchfr
Supt6
Sdf2
Dennd5b
Art3
Eps8
Shisa3
Snrpc
Exoc5
Ap5m1
Cxxc4
Cacna1c
Ctbp2
4933402D24Rik
Fam222a
Urm1
Megf9
Smug1
Btbd3
Qrfp
Cd96
Atp5l
Arg1
Uts2b
Dcaf12
Snx30
Ngef
Neu2
Mpp3
C2cd4a
Taf12
Spag9
Gm3448
Gm3417
Eif4g2
Pnoc
Angptl7
Thsd4
Vamp1
Tcf4
Dyrk3
Rnf4
Adam12
Pdpn
Msh5
Clic1
Foxp1
Crtam
C2cd5
Ptprj
Eci1
Tmem100
Bco1
Nt5c2
Klf3
Actg1
Celf4
Serinc1
Pmpcb
Tro
Slc35d3
Stk32a
Zbtb18
Krt90
Sema4b
Tfpt
Tcf21
Prpf31
Ndufs5
Haus4
Srbd1
Irf2
Snx15
Serpinb8
Cdk17
Ttc21b
Mef2c
Glis2
Natd1
Maf
Rpl3
Plch1
Alyref2
Mep1a
Zyg11b
Ndst1
Ikbke
Gse1
Bcas1
2010315B03Rik
Nin
Sh3pxd2a
Nupr1
H3c11
H2ac22
Efna3
Ap3m2
Lrrc4c
Gapvd1
Treml4
Nmnat3
Sox5
Uchl4
Gm28455
Eri3
Arid1a
Ptn
Tfb1m
Eya2
Zfp608
Rad18
Fgfr2
Foxo3
Epb41
Zpbp
Zfp710
Spata48
Cdk19
Parp16
Cxxc5
Tcte3
Ermard
Runx1t1
Cntrl
Wdr41
Ush2a
Ankrd53
Prkg1
Ndufs2
Gpr19
Adamts4
Tpbg
Ivl
D7Ertd443e
Sepsecs
Myo1b
Hapln1
Amer2
Nap1l4
Zc3h8
Rere
Hspa9
Usp29
Scp2
Peg3
9030025P20Rik
Wdr76
Nek9
Mfap1a
Agk
Lsm6
Rnf111
Nlrp10
Eif3f
Rbpms
Nfam1
Rbpj
Ano3
Tubb4b
Epc1
Arrdc4
Percc1
Gphb5
BC003965
Jakmip2
Hoxd8
Sox1
Dcp1b
Tatdn1
Ndufb9
Glce
Trip4
Lrp12
Klhl5
Gdpd5
Mtif3
Foxd3
Snx5
Mllt10
Mgme1
Marchf4
Dnah5
Ccdc170
Myo9b
Haus8
Dctn3
Arid3c
Enho
Cnot1
Tfdp2
Fignl1
Selenof
Hs2st1
Igf1
Fis1
Polr3gl
Pclaf
Nol6
Ddx39b
Ankrd34a
Slc25a51
Mbd3
Leng9
Prickle2
Dtx3
Cox20
Comt
D1Pas1
Lpar6
Mrpl4
Zfp664
Wipf1
Tmem60
Phtf2
Mn1
Ccdc92
Rap2b
Zfp536
Rcan2
Tmigd1
Mapk1
Smarca2
Lck
Fndc3a
Srrt
Nfia
Gja1
Pfkp
Eda
Clrn1
Epn2
Stxbp5
Meox1
Gm6588
Krt20
Bdnf
Igsf9
Rab40c
Elk1
St7
Ppp1r9a
Limch1
Akirin2
Ear10
Dct
Ints14
Alpk3
Mtmr6
Zfp512b
Adam7
Piwil4
Fzd10
Rfx4
Fam13c
Cfl2
Map2
Tmem144
Btbd8
Vmo1
Gltpd2
Ecpas
Usp4
Aftph
Cul3
Atp6v0e2
Zfp146
Hmx2
Rtn1
Cntn1
Srxn1
Zfp983
Mprip
Gcnt7
Stat5b
Msl1
Acyp2
Ptpre
Lama1
Micu3
Ip6k2
Smarcd3
Mapk6
Zfp521
Ddx3x
Pik3ca
Akain1
Tjp1
Slc9a6
Rph3al
Rai1
Prkag1
Ank3
Plxnb2
Nudt15
D16Ertd472e
Fbln1
Kifap3
Caskin1
Atp5o
Arid3a
Rasal2
AB010352
Vgll4
Tle1
Sp5
Gpr12
Usf3
Tbc1d10c
Ppp1ca
Myt1
Mmp28
H3c13
H2bc18
Flnb
Gpr1
Tmem107
Rhbdd1
Srek1ip1
Gm9376
Tcf12
Zfp708
Skor1
Gmnn
Dcn
Zfp84
Tmem11
Sec14l5
Hrob
H2az2
Pgk1
Parm1
Ube2o
Calca
Zfhx4
Samd4b
Gmfg
Crebrf
Vpreb3
Npc2
Isca2
Gm867
Mtarc1
Abcc4
Tmem231
Rps15a
Olfr102
Olfr100
Mtarc2
Iglon5
En1
Ubr2
Tcta
Taf4
Rhoa
Gtf3c6
Slc25a39
Shisa9
Ppp2r2d
Mapk1ip1
Klhl9
Cdh9
B3galt1
Fbxl7
Trim67
B3galt2
4921517D22Rik
Uba1
Psap
Ski
Zfp354b
Tyk2
Ldhal6b
Ranbp9
Rnf122
Fam160a1
Xlr3b
Fam117a
Abra
Smarcad1
Zmiz1
Tmed10
Spink7
Pgbd5
Frmd4a
Ackr4
Abcg2
Nemf
Trp53inp1
Cacybp
Epb41l4b
Psmd5
Cutal
Naxd
Unc45a
Tdp1
Rab13
Hddc3
Efcab11
Ufc1
Ssr3
Lars
Arfgap2
Triobp
Spcs1
Glt8d1
Gsx2
Gm5165
Supt7l
Slc4a1ap
Lbr
Puf60
Ppan
Kremen2
Palld
Mlkl
Fam210b
Exoc1
Dab2ip
Crb2
Nup210
Lrtm2
Cacna2d4