ChIP-Atlas: Target genes

Potential target genes for Hoxd9

Query protein: Hoxd9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416187 | Embryoid Bodies
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Hoxd9's Target genes

◢ Hoxd9: Average

◣ SRX7416187: Embryoid Bodies

◢ SRX7416188: Embryoid Bodies

◢ Hoxd9: STRING

Hdx
Riox2
Prdm13
Ngdn
F11r
Hoxa4
Alb
Gpr84
Zc2hc1c
Acyp1
Ubl4b
C1ql3
Slc37a3
Rab19
Slc5a12
Map4k5
Atl1
Hoxc6
Hoxc5
Acsf2
Hoxc8
Synpo
Pomc
Dpyd
Gm973
Otp
Gtf2h4
Arhgap28
Zfp503
Notch1
Zfp473
Vrk3
Mmrn1
Atp1b4
Speer4a
Pkdcc
Hoxb6
Hoxb5
Slc9b2
Hoxb4
Hoxb3
Prickle1
Trim59
Grap2
Efnb2
Nkx6-1
Pdlim5
Gpatch2l
Gcnt2
Hoxd8
Hoxd4
Hoxd3
St3gal2
Psd3
Irx1
Ffar4
Ccdc182
Hoxc4
Rarb
Maml2
Kif13b
Hoxa2
Hoxa1
Hoxb7
Ece1
Hoxb8
Meox1
Csrp3
Lpgat1
Icmt
Hes3
Gnat3
Rbp2
Dmrt3
Ttc30a1
Nkx2-2
Hoxa6
Hoxa5
Hoxa3
Hoxa7
Crkl
Cbfb
Srpx
Mdm2
Cdca8
9930104L06Rik
Gm527
Copz1
Ttc39b
Epha5
Rnf165
Olfr572
Olfr571
Tmem268
Atp6v1g1
Tlk1
Ifrd1
Ociad2
Ttr
Alox5ap
Prkar2a
Dnajb13
Foxn3
Itgb8
Cxxc4
Elf5
Fam174a
Slc31a2
Arfgef1
Zadh2
Tshz1
Btg2
Tspan14
Calcrl
St8sia4
Trio
Thumpd3
Cited4
Tjp2
Nap1l1
Apcs
Map4
Mad2l2
Draxin
Mab21l2
Clasp2
Plpp6
4430402I18Rik
Iigp1
Tox3
Ncoa7
Cntnap2
Rbm25
Tbc1d22a
Psmd12
Pitpnc1
Cox7a2l
Glrp1
Neurod4
Kcnip1
Dll1
Nrg1
Tshz3
Csrnp3
C330018D20Rik
Pcnx
Dtx4
Bend4
Galnt14
Dhx8
Sv2b
Dnm2
Olfm2
Nkx2-9
Bahcc1
Dock3
Prkar2b
Iqca
Rhcg
9430069I07Rik
Cradd
Rtn4rl1
Foxp2
Crp
Slc9a9
Myo10
Dip2b
Baalc
Sox21
Lrg1
Sema6b
Cpsf1
Ntn1
D6Ertd527e
Wt1
Ccn1
Radil
Krt222
Nr3c2
Tceal7
Gpc6
Foxp1
Mllt3
Slc27a4
Mbnl1
Pla2g2d
Higd1c
Crlf2
Hhat
Kank1
Gm18905
Gm15517
Acp4
Iglon5
Dph5
Mpv17l
Pdxdc1
Gm4737
Hipk3
Kmt5c
Lemd2
Wdr18
Myo1d
Skap2
Th
Atg4c
Cacnb2
Cep128
Pold3
Akap6
Tnfsf13b
Dap3
Gfra3
Meis2
Sgpp1
Cmtr1
Map1b
Oxnad1
Dph3
Gm4791
Hhip
Plxnc1
Scn1a
Vta1
Skida1
Mllt10
Rnf220
Pik3r4
Palld
Prrxl1
Percc1
Ccdc154
Mcub
Adipor2
Phc2
Fam135b
Rara
Ndnf
Bmp7
St8sia2
Dst
Lpp
Dach2
Pcnx3
Map3k11
Sptssa
Oacyl
Atp5g2
Lyrm9
St6galnac1
Ccdc136
Olfr646
Ncam1
Tob1
Mbp
Ivd
Trim23
Trappc13
Shld3
Cit
Cxcl12
Phactr3
Tph2
Vapb
Smim8
Bzw1
Zfp143
Pou3f2
Scube2
Ing3
Rtl1
Actn4
Erdr1
Lipo4
Mecom
Col4a2
Col4a1
App
Prmt3
Cbfa2t3
Snca
H4c11
H2bc14
Sox6
Enpp3
Mapre1
Phox2b
Ptprd
Tbc1d10b
Septin1
Mylpf
Hsdl2
Hnrnpa1l2-ps2
Elmo2
Lysmd3
Tpm3
Sqor
Trib2
Emcn
Tmem53
Tmigd1
Ifna9
Fmo2
Dach1
Iffo2
Cd83
Tcstv3
Hpf1
Arpp21
Thrb
Aff3
Gprc5d
Hivep2
Cemip2
Pik3r5
Got2
Lgi1
Psmg2
Cep76
Sema6d
Eif2s3x
Rab27a
Josd1
Gtpbp1
Tti2
Rgs5
Vdac2
Rps26
Add2
Crb1
Dusp5
Slc6a1
Xpr1
Utp4
Derpc
Chtf8
Grem2
Kif2c
Mapk9
P4ha3
Ermn
Efcab5
Chchd5
Tox2
Smad1
0610009B22Rik
Zfp703
Slc44a3
Zfp423
Pex5l
Mycl
Pax8
Casp7
Acot1
Asb5
Kdm8
Rps23
Kbtbd13
Cyp19a1
Tle3
Hand1
Epb42
Gcc1
Arf5
Pum1
Ccdc60
Nr0b1
Adtrp
Aven
Nsg2
Fbxo28
G2e3
Ivl
Smcp
Mfsd9
Gja10
Casp8ap2
Tmem156
Etv3
Iqsec1
Tnrc18
Ccdc174
Aktip
Pakap
Tbc1d9
Stxbp6
1700010B08Rik
Asap1
Clmn
Pou3f3
Ppp3ca
Gpx2
Ccdc187
Erich6b
Tnfaip8l2
Kifc3
Rprml
Lyzl6
Narf
Cybc1
Asic4
Mia3
Rab30
Stox2
Tcim
Mrps33
Epsti1
Marchf4
Ip6k3
Lta4h
Nup107
Fbxo16
Igf1
4930550C14Rik
Pbx1
Olfr298
Pex2
Ythdf3
Zkscan1
Cubn
Ncoa5
Galr3
Slc22a1
Meis3
Zfpm1
Cd9
Zfp330
Egr2
H6pd
Scrn1
Dus1l
Ccdc33
Pdia5
Adgrv1
Zfand3
Spp2
Col6a4
Ormdl3
Lrrc3c
Megf10
Nipsnap1
Pou1f1
Pou4f3
Kcnip2
Plaa
Gm12657
Foxf2
Mthfd2
Mob1a
Tmem260
Gm14092
Ccbe1
Fgd3
Capn8
Tle4
Mnx1
Pik3r1
Grpel2
Rps29
Glp1r
Marveld3
Xaf1
Prtg
Slc35d3
Akain1
Robo2
Tom1l2
Drc3
Lin28a
Smug1
Arglu1
Atrn
Ccdc171
Dad1
Abhd4
Gtf2ird2
Zc3h12c
Aebp1
Lrrtm2
Primpol
Casp3
Zfp326
Ikbke
Slc4a8
Sox5
Fam78b
Galnt9
Mgat5
Clec2d
Rragd
Celf4
Tmem178b
Abcc4
Ppp2r2a
Ppp1r15b
Fyn
Gucy1a1
Chrna4
Zyg11b
Tial1
Garre1
Map6
B3galt1
Lck
Egln2
Cyp2t4
Sfmbt2
Rnase12
Rnase11
Thsd4
Inka2
Ddx20
Cd96
Mrpl23
Olfr1441
Gphb5
Fam181a
Cyren
Ctsf
Cda
Toe1
Mutyh
Hpdl
Elavl4
Zfp945
Mfng
Dars
Vamp9
Tub
Ppp1r9a
Supt6
Sdf2
Rps10
D1Pas1
Nol4l
Olfr1385
Nme6
Arrdc4
Zdhhc2
Tex14
Apela
Srgap3
Sertad4
Mfsd10
Prkn
Taf12
Gmeb1
Pgm2
H2bc6
H1f4
Rprm
Rad54l
Atic
Ccnd1
Tatdn2
Papss2
Tubb6
Olfr1098
Rpgrip1
Lrfn2
Scmh1
Lpo
Mki67
Rtn1
Sgcd
Spock2
Eps8
Nin
Bcas1
Hnrnpl
Ech1
Gse1
Hagh
Fahd1
Dip2c
Fam204a
Zfp292
Foxn4
Fbxw15
Art3
Unkl
BC003965
Megf9
Tpbg
Aqp8
Ubqln2
Cnot2
Susd1
Tcerg1
Pkd2l1
Ajuba
Dipk1a
Zfp608
Stra6
Pfas
Ctc1
Wbp11
Smco3
BC049715
Sirt4
Stk33
Srbd1
Srprb
Cacng5
Flrt1
Zbtb46
Upp2
Hapln1
Rec114
Plekha6
Cfl2
Myl7
Zfp672
Sh3bp5l
Nms
Insyn2a
Parl
Zfp664
Ccdc92
Skil
Tmem132b
Best3
Trpc7
Mup5
Lpar4
Angpt4
Dnajb5
Gucy1b2
Krt9
Gm21698
Gm21680
Scrt2
Ripply1
Fat3
Nacc2
Cacna2d1
Olfr71
Cux1
Vmn1r53
Drd2
Ebf1
Adcy2
Aqp6
Tmem200b
Lama5
Ciao3
Nebl
Mef2c
Ptprj
Kbtbd6
Evi5l
Nkain2
Gtf2a1
Rptor
Emp3
Ccdc114
Srpk2
Cdk17
Ebf3
Nav2
Cryzl2
Dyrk3
Sorbs1
Zbtb34
Evx1
Gpr132
Ascl1
Fam234b
Fshb
Lrrc36
Ngef
Neu2
Enho
Plcd3
Acbd4
Jakmip2
Metrn
Fbxl16
Sp9
Gga2
Gm21663
Sumf1
Lrrn3
Purb
Ttyh3
Zbtb10
Cd40lg
Slc30a9
Btbd3
Pgbd5
Fgl2
Sh3pxd2a
C1qc
C1qb
Prkg1
Rhbdd1
Nell2
Them7
N4bp2l1
Zc3h3
Dpt
Eri3
Lrrn2
Mafa
Crybg3
4933424G06Rik
Exoc5
Ap5m1
Il20rb
Tro
Slc25a42
Zfhx4
Sybu
Mrfap1
Schip1
Fer
Lin28b
Lrrc4c
Ccdc170
Alpl
Slc6a17
Usp21
Ufc1
Srxn1
Slc35f6
Cavin4
Cntn1
Vkorc1
Prss53
Bckdk
Poc5
Prkd3
Zfp775
Repin1
Gm5111
Cdhr3
Cacna1c
Scarb2
Smarcal1
Arg1
Polr3gl
Lix1l
Ankrd34a
Ccl26
Dnah5
Kmt5a
Nhlh2
Muc6
Ankrd40
Ttc7b
Cfap58
Postn
Olfr102
Olfr101
Olfr100
Myt1
Tmem167b
Abr
Lypd10
Lrrfip2
Ddx1
Foxj2
Sema4b
Shd
Fsd1
5730409E04Rik
Glis2
Upf2
Ear10
Txndc11
Tmem144
E4f1
Nmnat3
Gm4922
Wdr6
Dalrd3
Fbxw25
Prdm6
Dhx16
Rab28
Ski
Rora
Mtarc1
Ppp1ccb
Sos1
Epb41l4b
Adam12
Mtcl1
Ptpn3
Lrrcc1
Bcap29
Tcf7l2
Fam117a
Pyurf
Lancl2
Ksr1
Qrfp
Adnp2
Epb41
Gpr1
B3galt2
Ranbp9
Galk2
Cops2
Slc43a1
Pth1r
Tcf21
Zc3h8
Kif21a
Cdk19
C1qtnf2
Fbxw7
Adora2a
Zdhhc16
Exosc1
Rgs3
Crtam
Vps41
Epn2
Prdm2
Clptm1l
Ptger2
Leng9
Trim56
Ttc1
Gm14137
Gchfr
E130308A19Rik
Exoc2
Crb2
Phpt1
Mamdc4
Ajm1
Pabpc4l
BC107364
Manbal
Rab5c
Cyp2s1
Tnks2
Lrrc4
Selenoi
Treml4
Runx1t1
Crmp1
Hlcs
Nr4a2
4933402D24Rik
Stk32a
Inpp5f
Slc2a10
Nt5c2
Cmtm8
Pabpc6
Cux2
Dbx2
Lhx1
H4c14
H3c13
H2bc18
Cntf
Rab11fip5
D430041D05Rik
Hoxd9
Gmnn
Ralbp1
Rhbg
Ndufc2
Abra
Wdr7
Ubl3
Uncx
LTO1
Fam13c
H4c2
H4c1
H3c2
H3c1
H2ac4
H1f1
Wipf1
Fra10ac1
Angptl7
Tecta
Actr3b
Epb41l5
Aftph
Cbx2
Mpp7
C2cd5
Asb8
Tra2b
Pdpn
Zpbp
Spata48
Znrf4
Mprip
Fggy
Jrk
Tmed10
Alkbh5
Nrxn1
9330182O14Rik
Zic5
H4c8
H3c8
H2ac10
Klhl5
Slc25a51
Tmem107
Avpr1a
Kansl1l
Urm1
Mtif3
Flnb
Slc1a3
Tmem100
Ackr4
Fzd8
Pacrgl
Asxl3
Epc1
Coq10a
Ankrd52
Sall1
Mrps36
Sh3bp5
Adrm1
Cnot1
Slc24a1
Ints14
Nudt15
Tmtc1
Rabl2
Upk3bl
Osbp
Wnt1
Ddn
Fzd10
Tex24
Man1a2
Nedd9
Gng2
Fis1
Krt20
Rapgef6
T2
Qsox2
Zfp334
Hs3st3a1
Gpr160
Mlip
Fam222a
Tubb2a
Ube2o
Nrxn3
Rufy3
Col6a6
Tbl1x
Sinhcaf
Srek1ip1
Cwc27
Ssr3
Adh6b
Nr2f2
Arntl2
Syk
Ctif
Kcns3
Slc5a11
Tle1
Sdc1
Rusf1
Gtsf1l
Racgap1
Mtnr1b
Phgdh
Nkx2-6
Mn1
Mobp
Serpinb8
Apobec2
Tspo2
Spink7
Lypd1
Zfp41
Natd1
Agk
Tenm3
Sobp
Qk
Ndufb4c
D7Ertd443e
Lamc2
Btbd8
Atxn7l3b
Atp8b4
Mrap
Kcnk4
Gpr137
Esrra