ChIP-Atlas: Target genes

Potential target genes for Cdx2

Query protein: Cdx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11593785 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Cdx2's Target genes

◢ Cdx2: Average

◢ SRX5576459: E8.5 embryos

◢ SRX1980013: EpiSC

◢ SRX1980014: EpiSC

◢ SRX19320236: ES cells

◢ SRX19320237: ES cells

◢ SRX19320238: ES cells

◢ SRX028555: Intestinal villus

◢ SRX112502: Intestinal villus

◢ SRX112503: Intestinal villus

◢ SRX112504: Intestinal villus

◢ SRX11593784: Trophoblast stem cells

◣ SRX11593785: Trophoblast stem cells

◢ SRX204146: Trophoblast stem cells

◢ SRX404307: ZHBTc4

◢ Cdx2: STRING

Peli3
Hoxc6
Hoxc5
Cldn7
Ifi205
Trem1
Gpr84
Bex3
Hand1
Tfip11
Fsbp
Mrpl23
Kdm5a
Ccdc77
Cldn34d
Pacsin1
Sync
Tmem231
Gabarapl2
Ankrd37
Trio
Sp4
Cystm1
Arid5a
Hoxd4
Gm1673
Map3k20
Prss50
Morc4
Pgam2
1700029F12Rik
Kmt2a
Lhfpl5
Hoxb3
Cflar
Cipc
Zmpste24
Fndc7
Vgll1
Lpar6
Prcc
Tanc1
Arih2
Slc46a1
Serpinb1a
Olfr1252
Themis3
Zfp7
Scara5
Rnase2b
Olfr1412
Olfr1411
B3gnt7
Wdr72
Cyp2d34
Rin3
Lax1
Gm34653
Zc3hav1l
Otud4
Gtf2ird2
Arhgap32
Tlr3
Wnt6
Olfr1368
Wwp2
Ido1
Zfp446
Rnf165
Cdrt4
Trim2
Phox2b
Zfp382
Erfl
Bmp8b
Stra8
Thbs1
Ctsf
Gpr161
Ccdc89
Slc39a2
F11r
Fhl2
Hpd
Lin28a
Defa6
Defa24
Hoxb4
Lrrc18
Cd300e
Klhl22
Frrs1
Tfap2c
Zkscan17
Gas7
Zfp996
Olfr535
Defb11
Cltc
Fzd10
Olfr648
Aqp9
Fbxo21
Rnf214
Pcsk7
Zbtb10
0610010F05Rik
Slc14a1
Stra6l
Tceal9
Hoxc4
Rnf157
Serpinb9e
Fabp12
Utp25
Smap1
Flacc1
Tfrc
Rab32
Tbce
Bcor
Dennd1b
Amer3
Cdca7
Prl6a1
Bglap
Smad5
Gm5622
Drd3
Aplp1
Exoc5
Ap5m1
AW549877
Cldn3
Kifc3
Ogdhl
Pla2g5
Tango6
Igsf3
Uba5
Acad11
Btbd35f26
Btbd35f16
Btbd35f11
Btbd35f10
Adar
Lsm5
Zfp449
Dguok
Kcng2
Hemgn
Grhl3
Nck2
Lysmd2
Akap17b
Tmem114
Slc10a6
Gm29802
Tbc1d13
H2az1
Epha1
C1ql1
Slc25a17
Cemip2
Golga7b
Herpud2
Acp5
BC053393
Upk1a
Timm10b
Arfip2
Ppp1r3e
Stard10
Hat1
Slc44a4
Rpgrip1
Hnrnpc
Fbxo46
Bhmg1
Slc44a1
Olfr960
Ier2
Sult1c1
Tmsb10
Gm1070
Hoxb9
Abca4
Tie1
Brox
Aida
Pan3
Hoxd9
Hoxd8
Bin2
Reep3
Tnrc6b
Smarcad1
Zbtb45
Cd59a
Cdk18
Plekha7
Zfp42
Krtap6-5
Gm10228
Fgd4
Phc2
Ppef2
Rin2
Ceacam14
Pccb
Mtf2
Ednra
Vasn
Fem1al
Zfp982
Man1a2
Mrps24
Il13
Ddah1
Gm829
Bcl2l14
H2-DMa
Brd2
Capza2
B4galt5
Polr2h
Scgb1b27
Kif21b
Shmt1
Spry4
Saa3
Utrn
Gm13212
Olfr414
Cmtm7
Scd4
Atp2c1
Txlng
Snx24
Brd3
U2surp
Map3k1
Ccdc43
Sall4
Rdh5
Bloc1s1
Coro1c
Lcn9
Glt6d1
Lemd2
Lcn4
Atp6ap1l
Ptprs
Eml1
Oit1
Cbfa2t3
Apol10a
Cd27
Pdpn
Stat3
Slc40a1
Ppp1r18
Nrm
Elac1
Plch1
Crot
Greb1
Tfeb
Cdx1
Susd5
Traf3ip2
Pik3cb
Ywhag
Itprip
Dsc2
Atf7ip2
Mllt1
Rpe
Tnnt3
Efna3
Gpkow
Cenpm
Olfr1510
Ap2a2
Upp1
Mtm1
BC061237
Sh2d4b
Vmn1r83
Slc49a4
Klk14
Olfr1342
Rgs5
Tdpoz3
Ndst1
Nlrc3
Cma2
Klhl24
Usp28
Fasl
Rnf128
Tbc1d2
Zdbf2
Rwdd2b
Trnt1
Tex48
Lpar1
Tnfrsf11a
D630023F18Rik
Pdik1l
Spred2
Trp53bp2
Lrrn4
Ubxn11
Cd52
Smagp
Lrrfip1
Paqr5
Zfp944
Zfp758
Dok2
Lpcat4
Tmem11
Irf2bp1
Micu2
Nr6a1
Dao
Zfat
Grip1
Fam50b
Cdc42
Plet1
Tiam1
Bmp1
Xntrpc
Xndc1
Rnf121
Hps3
Elf5
Ppp1r14a
Fbp2
Morc3
Zfp110
Tmod3
Sema4d
Slc7a7
Rock2
Kat6b
Dcaf5
Morc2a
Ift46
Arcn1
Smco4
Mbp
Atp5g2
Vmn2r16
Tpgs1
Urgcp
Kcng4
Cdh1
Myo1d
Hoxa7
Hoxa3
Cables1
Pwwp3a
Slco1a6
Sh2d5
Exoc6
Pou5f1
Rbm41
Myoz2
Lect2
Ankrd50
Loxl3
Dok1
Ffar4
Mtch1
Zfpm1
Sec14l1
Csta1
Tcstv3
Sgms1
Sost
Igsf23
Steap2
Stag3
Gpc2
Ptpn13
Myo7b
Dppa1
Glyctk
Dppa4
Gm45521
Nat8f5
Reps1
Jarid2
Ezr
Olfr368
Kcnj15
Rpl22
Rnf207
Krt9
Slc22a13
Abra
Hao2
Mon1a
Zfp936
Cbln4
Zbtb7b
Arid2
Pth1r
Enpp7
Snai1
Mid1
Ccser2
Arpc1b
Gcnt3
Cst9
Ppp1r35
Mybl2
Gm614
Tor1aip2
Mgat4b
Enc1
Sdf4
B3galt6
Cryz
Lum
Supt6
Sdf2
Dgka
Tmsb4x
Ttc39b
Tmem171
Itfg2
Vps37c
Tm4sf20
Tpd52
Otx1
Ctbp2
Sh3bp4
Pld1
Pctp
Plbd1
Ogt
Abcc10
Sult2a6
H2-Eb1
Btbd8
Lpcat2b
2310009B15Rik
Satb2
N4bp1
Ttc30a2
Ttc30a1
Eif2b5
Srrm1
Dusp6
Zfp512b
Fam160a2
Cwh43
Plaur
Mmp1b
Gm6583
Arap1
Olfr373
Prdx6
Gsdma3
Ssbp4
Mmp27
Tsen54
Caskin2
Arhgap27
Gng12
Atg4c
Sec62
Tmem186
Pmm2
Gpr4
Zyg11a
Mapk11
Plekha3
Fkbp7
Mvd
Tmem232
Arpc2
Klhl36
6430548M08Rik
Nrsn1
Anapc10
Abce1
Zp3r
Krt8
Ube2r2
Mtmr7
Serpinb9g
Adh1
Glra4
Tmem185b
Pla2g7
Slc25a24
Rusc2
Entpd3
Ctsl
Tph1
Olfr372
Akap11
Zfp280d
Scmh1
Dusp11
Nnt
Wnt11
Cenpf
Ube2q1
Tab2
Tes
Tmem211
2900026A02Rik
Tmem125
Terf1
Defb36
Smad2
Tdrd7
S1pr1
Hdac2
Srgap3
Zfp568
Sys1
Prpf39
Manea
Snx12
Bnip1
Prima1
Ssbp3
Zfyve27
Zfp821
Ist1
Cd2bp2
Dnm2
Olfr782
4930486L24Rik
Ppp6r3
Rhox4g
Tmem50b
Srprb
Megf10
Thrap3
Tkfc
Ddb1
Zadh2
Tshz1
Zfp976
Shc1
Cks1b
Tank
Foxred2
Olfr461
Arg1
Usp1
Gcnt2
Srsf9
Ctnna1
Cdk2ap2
Zmynd8
Sycn
Sh3pxd2b
Txnrd1
Ccdc126
Nkx2-2
Cfap46
Hsd17b2
Irgc1
Arsg
Cryge
Meis1
Smyd1
Krcc1
Zcwpw1
Mepce
Zp1
Slc2a1
Zfp512
Bpifc
S1pr2
Wipf1
Deptor
Wdr76
Rab18
Osbpl9
Gm960
Tulp1
Alpk3
Gnpnat1
Trim36
Mex3d
Ints6
Olfml1
Zdhhc21
Amt
Vmn1r2
Zfp13
Add2
Trim44
Nadk
Snrpn
Bmp4
Pygb
Amotl1
Eif5a2
Uts2
Nfatc2ip
Zfp41
Tra2a
Krtap5-3
Efna4
Neto2
Egfl7
Kdm5b
Vdac1
Tm7sf3
Eif4h
Elf3
Cdc6
Smap2
Mcm3
Eea1
Smc3
Ly6f
Fgfr4
Orai1
Gid4
9130008F23Rik
Prdm10
Gabpb2
Plekhg3
Zc3h6
Sdc4
Sorl1
Pik3cd
Kctd1
Sct
Capn2
Pcp4l1
Rora
Noct
Atp2c2
Rps6ka5
Lcp2
Depdc7
Gm12789
Olfr1151
Iqcf4
Xylt1
Dusp4
Gm2696
Gm1604b
Sp3
Tmem213
Akr1cl
Hexb
Thpo
Chrd
Rrm2
Alyref2
Triml2
Ido2
Atl3
Mtus2
Clcn5
Prl7d1
Copz2
Samd1
1700067K01Rik
BC034090
Ubr2
Vasp
Hoxa4
Vnn1
Tmcc3
Vpreb1
Top3b
Igll1
Id3
Odf2l
Slc22a23
Dusp12
Bnip3
Ccdc13
Cyp1a1
Pts
Eif2s2
Hes1
Col4a2
Col4a1
Flt3l
Smpdl3a
Glt8d2
Pgam5
Zfp91
Lpxn
Larp1
Wfdc21
Heatr6
C130073F10Rik
Gjb3
Dixdc1
Aasdh
Ak1
Zfp975
Gch1
Cidec
Id1
Usp24
Adgrf5
Slc1a3
Rxfp3
Notch1
Olfr1425
Acpp
Igsf8
Itsn1
Cryzl1
Ehd4
Dpp6
Ppp6r2
Hgsnat
Ccl20
Pcsk6
Prnp
Prn
Tasor
Lrrc8d
Pogk
Vrk1
Spg20
Lims1
Klf7
Tnfrsf9
Rab8a
Serf1
Bdp1
Grap2
Trpc7
Clrn1
Adrb3
Gm21814
Abcg2
Lgsn
Tmem59
Tceanc2
Ciart
Msh4
Mdfic
Slc24a5
Kcnip2
Kcmf1
Ptk2
Tspan9
Alox15
Zscan20
Cd300ld
Slc7a9
Pbx1
Rmnd5b
Kat7
Epb41l5
Limk2
Fbxl14
Hsd3b1
Mtf1
Col18a1
Ptma
Pitpnm2
Blnk
Cacnb2
Arhgap12
Ubald2
Hs3st3b1
Gse1
Art5
Art1
Fbxw15
Gm21297
Serinc1
Trim55
Map2k6
Cald1
Dennd2d
Cgnl1
Diaph1
Tpcn1
Iqcd
Spry2
Snupn
Tat
Gadd45b
Ryk
Uggt2
Atn1
Akap7
Taar7d
Gdf6
Tdpoz2
Gal3st1
Gm5458
Taf12
Tfcp2l1
Tgif1
Orc2
Lmo4
Aadacl4fm5
Rtl8b
Akr1b3
Sh3bp2
Zfp977
Hes7
Praf2
Eci3
Zfp28
Krtap2-4
Gm11937
Slain2
Rcl1
Gm11562
Olfr523
Lrrc8a
Rbpms
Glo1
Gsg1
Cd55
Znrd2
Fam89b
Ehbp1l1
Knl1
Mrps23
Baz1a
Odaph
Cavin3
Acp6
Lrrc23
Plekhb2
Nfxl1
Cop1
Gng2
Vamp9
Kbtbd6
Crygd
Fgf6
A430005L14Rik
Cst3
Socs5
Trim29
Slc12a7
Synj2
Plod1
2510039O18Rik
Msx1
Plin3
Cdsn
Msx2
Tbx20
Eps8
Per3
Ccdc166
Crygf
Rell1
Mycn
Pik3ip1
Slc39a10
Sft2d2
Tcn2
H2az2
Rps27rt
Rab13
Cep97
Zfp985
Tex14
Slc35a1
Tdrd9
Atp5mpl
Cops7a
Zfp456
Fbxw11
Tex19.1
Pmaip1
Olfr52
Zfp981
Miip
Fv1
Zfp961
Med12l
Hsd17b14
Clec12a
Rmdn1
Cpne3
Gm9376
Foxo1
Oas3
Plekhh3
Cntnap1
Ccr10
Tmem107
Zfp408
Arhgap1
Tcof1
Gm973
Ccdc33
Noto
Tyrobp
Igf2
Hoxa2
Taf5
Alpl
Ccl4
Usf3
Hoxa1
Bid
Ubxn2a
N4bp2
C77080
Gm14393
Mgat4c
Phactr1
Iapp
4931414P19Rik
Vav3
E2f6
Chac2
Bend3
Gsto1
Fem1a
Ppp1r27
Mcrip1
Abcf3
Trmt44
Fhit
Myo1b
Gtpbp3
Ano8
Ccer2
Specc1
Adipor1
Rnf125
Cd38
Tdrkh
Aldh1b1
Fig4
Ak9
Hip1r
Elf4
Ccdc3
Asb8
Slc9a5
Fhod1
Grifin
Shcbp1l
Cd47
Sumo1
Rbm20
Cc2d1a
4930432K21Rik
Sae1
Sspn
Olfr102
Olfr100
Nup133
Rhbdd3
Ewsr1
Sik3
Pafah1b2
Cep20
Gm94
Eif2ak4
Trerf1
Galr1
Pcbp4
Abhd14b
Abhd14a
Sema4c
Cyp2g1
Pygl
Supt7l
Slc4a1ap
Rab31
Gdf11
Catsperg1
Cmc1
Ubash3b
Adam19
Rbm47
Lbr
Arid1a
Myl12b
Tjp3
Pip5k1c
Bloc1s5
4930474N05Rik
Meis3
Arhgap29
Agfg1