ChIP-Atlas: Target genes

Potential target genes for Cdx2

Query protein: Cdx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5576459 | E8.5 embryos
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Cdx2's Target genes

◢ Cdx2: Average

◣ SRX5576459: E8.5 embryos

◢ SRX1980013: EpiSC

◢ SRX1980014: EpiSC

◢ SRX19320236: ES cells

◢ SRX19320237: ES cells

◢ SRX19320238: ES cells

◢ SRX028555: Intestinal villus

◢ SRX112502: Intestinal villus

◢ SRX112503: Intestinal villus

◢ SRX112504: Intestinal villus

◢ SRX11593784: Trophoblast stem cells

◢ SRX11593785: Trophoblast stem cells

◢ SRX204146: Trophoblast stem cells

◢ SRX404307: ZHBTc4

◢ Cdx2: STRING

Nfat5
Tcstv3
Brox
Aida
Hnrnpa0
Nfyb
Kat6a
Ctnna1
Cldn34d
Zfp341
Hsp90aa1
Stat3
Vangl2
Sspn
Stat1
Hspe1
Hspd1
Syp
Tlx2
Mob4
Prr14l
Pfdn4
Cyp24a1
Il31ra
Hsp90ab1
Alx3
Dmbx1
Gpr84
Fabp4
Ski
Pou3f1
Ssbp2
Xpnpep3
St13
Cdx1
Skor2
Tbc1d14
Slc32a1
Slc35e2
Lyl1
Kpna1
Six2
Ttc28
Tal1
BC107364
Gtf3c6
Dlx1
Hmx3
Hmx2
H3c6
Prepl
Camkmt
Hsph1
Kifc1
Tex14
Gm4307
Gm4305
Gm4303
Slc35g3
Polr2a
Tmem125
Hspa8
Fam90a1b
Apoo
Kifc5b
Egr1
Taf12
Ssbp3
Eapp
Six3
Mafa
Prdm14
Zcwpw2
Azi2
Uspl1
Pitx1
Foxe1
Tmem107
Asmt
Abhd6
Foxd4
Acot7
Bub3
Runx3
St3gal4
Nr5a1
Tbx2
Pde10a
E030030I06Rik
Tfap2c
Ubc
Ubb
Fam53c
Sirt4
H3c15
H3c14
H2ac19
H2ac18
Serpinh1
Alx1
Taf4
Hdac2
Gad1
Foxi3
Dnaja1
Pradc1
Cct7
Treml4
Setx
Lhx2
Prdm16
Mecom
H2bc6
H1f4
Gm4981
Irx3
Hoxc10
Fus
Ubfd1
Ears2
Calm1
Hspa1b
Sox9
Pura
Hnrnpa2b1
Cbx3
Fermt1
Mnd1
Dlx4
Csrnp2
Zfp536
Isl2
Stap2
Mpnd
Hoxb2
Gtf2a1
Actb
Tfrc
Barhl1
Nabp1
Polk
Cert1
Prkra
Pjvk
Rnaset2b
Rnaset2a
Hoxb7
Fcgr3
Tlx3
Flt1
Aldh1a2
Shisa3
Id4
Stip1
Pik3r2
Barx1
Hoxd3
Slc41a3
Mettl1
Eef1akmt3
Etfrf1
Casc1
Foxl2
Dnajb1
Rita1
Ddx54
Rnf220
Ube2b
Cdkl3
Zfp523
Rsrp1
Ppig
Napepld
Srsf7
Magohb
Plau
Pcif1
Osr2
Ifnz
Gm13290
Gm13289
Gm13285
Gm13276
Gm13272
H4c2
Srsf3
Rax
Ikzf3
Hnf1b
H3c2
H2ac4
Dnajb9
Zc3hav1l
Aasdh
Poldip3
Chordc1
Stag1
H3c13
H2bc18
Ccdc194
Vipas39
Pdgfra
Cct8
Ahsa1
Ncl
Scd4
Zfp959
Wt1
Vsx2
Tspan13
Lbx1
Guf1
G3bp1
Cct4
Hmgn2
H2bc4
H2ac6
Alx4
Ntn1
Zfp146
Jtb
Dapk3
Nkx2-4
Ssu72
Tti2
Pts
Extl3
Hmx1
Tubgcp6
Osbpl9
Sphk2
Rpl18
Fam83e
Satb2
Hddc2
AW549877
Evx1
Eif4g3
C1ql1
Zfp512b
Ap3m1
Adk
Prdx1
Tmem163
Tbx5
Ralyl
Btbd6
Dhh
Zfp568
Hoxc12
Gbe1
Fkbp4
Bmpr1a
Tubb2b
Ccdc117
2410002F23Rik
Paip2b
Cyp2d34
Pctp
Ube2q1
Aars2
Phf6
Dnajb12
H4c11
Zfp873
Rpl22l1
Nr2e1
Mrpl2
Klc4
Cul7
Hoxc6
Hoxc5
Rrp1
Pnpla8
H4f16
H2aj
Trim39
Mylip
Gm10499
Btbd9
Ndufs1
Eef1b2
Xrn2
Selenot
Emx1
Slc25a29
Mafb
Tdrp
Itgb1
Sgf29
Aunip
Zdhhc3
Wdr4
Thumpd1
Tfap2e
Plod2
Klf14
Kctd20
Hmgb2
Exosc7
Anks1b
Sp6
Slc25a38
Prdm13
H2bc12
H2ac12
Gdf7
Eomes
H3c11
H1f5
Ero1a
Kctd9
Cdca2
Snrnp70
Pax7
Odc1
H2bc22
H2ac22
Hoxb3
Dnm2
Ciart
Rdm1
H60b
Cenpv
Slc9a1
Slc30a3
Sim2
Mvk
Mmab
Jund
Iqcn
Deaf1
Tmem80
Ahsa2
Ubxn7
Ier5l
Carmil1
H3f3b
Txn1
Nup153
Ncaph
Hpse2
Cul5
Acin1
1700123O20Rik
Eloc
Utp15
Ankra2
Tsc22d1
Stmn1
Stag3
Gpc2
Gpam
Nup133
Dennd6a
Prox1
Mto1
Dlx3
Cpe
Cgas
Vcpkmt
Pax5
Gorasp2
Asxl1
Mtx3
Cbr3
H4c18
H4bc24
H2bc23
H2ac24
H2ac23
H1f2
Mcph1
H3c10
H2bc14
Yap1
Fam174c
Cirbp
Shc3
Map2k2
Ebf1
Cfl1
Caprin1
Seh1l
Dusp1
Specc1
Tbx4
Rps20
Pcnp
Foxc2
Atf4
Sfi1
Oaz1
Rxylt1
H4c4
Gnal
2700062C07Rik
Umps
Plcg1
Elavl2
Rbm47
Nkx2-6
Crot
Tmed3
Tiparp
Hnrnpab
Dars
Glul
Foxc1
9130401M01Rik
Hoxa13
Pigz
Mfsd14a
Khdrbs1
Ccdc62
Asph
Mllt3
Secisbp2
Trim2
Nhlh2
Tmem30b
Npy
Nefl
Myl4
Cdc27
Phox2b
Lmx1b
Gm3739
Ebf2
Dmrt1
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Haus4
Zfp24
Cck
Wbp4
Prob1
Mzb1
Esrrb
Elf1
Eif4b
H2ax
Ywhaq
Amotl2
Nfyc
Mta2
Txnrd3
Rae1
Nkx3-2
Ddx5
Cep95
Akap8
Spata13
Prex2
Olig2
Nkx6-1
Mios
Maff
Ddx59
Gabpb1
Rft1
Cers2
Anxa9
Zfp800
Ppwd1
Cenpk
Hoxa9
Tmem131l
Prpf19
Nipa2
En1
Dennd6b
Rasgrf1
Fbxo46
Bhmg1
Mtf2
Ubqln1
Cacnb4
Bcl6
Kbtbd6
Cwc22
Zfand2a
Sidt1
Prdm6
Mrps28
Rabep2
Nufip2
Cbln1
Unk
Maml3
Ppdpf
Gjb2
Esyt2
Zic4
Wac
Srrd
Hps4
Flywch1
Cnpy1
Bves
Zfp518b
Ikzf1
Arpp21
H2bc13
H2ac13
Dmrt3
Acan
Rrp1b
Hsf2bp
Irx2
Tmem39b
Tdp2
Rps3a1
Acot13
Pou6f1
Wtap
Usp40
Rbm6
Nt5c3
4930453N24Rik
Ptgfrn
H2-Ab1
Fgf5
Stard6
Atp6v0c
Amdhd2
4930503L19Rik
Tmtc1
Rap2a
Gmnn
Rpl23
Zfp513
Hsf1
Grin2b
Edn1
Bop1
Rbmxl2
Wnt1
Tfap2b
Larp4
Rcor1
Hikeshi
Gata5
Fgf15
Irx1
Tbc1d5
Pax1
Senp8
Myo9a
Slc16a14
Spata18
Sgcb
Pacsin1
Kmt2a
Peli3
Cldn7
Ifi205
Trem1
Bex3
Themis3
Kdm5a
Ccdc77
Hoxd4
Hand1
Fsbp
Mrpl23
Tfip11
Gm1673
Tmem231
Gabarapl2
Ankrd37
Sp4
Lrrc18
Sync
Map3k20
Trio
Hoxb4
Morc4
Lhfpl5
Cystm1
Prss50
1700029F12Rik
Cflar
Arid5a
Pgam2
Cipc
Gtf2ird2
Zmpste24
Slc46a1
Fndc7
Olfr535
Tanc1
Serpinb1a
Vgll1
Bglap
Fzd10
Lpar6
Prcc
Olfr1252
Slc25a17
Rin3
Olfr1412
Olfr1411
B3gnt7
Olfr1368
Zfp7
Hoxc4
Scara5
Ido1
Arih2
Lax1
Otud4
Zfp446
Tlr3
Wdr72
Ccdc89
Zfp382
Stra8
Bmp8b
Gm34653
Cdrt4
Hpd
Wwp2
Arhgap32
Rnase2b
Olfr806
Rnf165
Lin28a
Ctsf
Plekha7
Thbs1
Cltc
0610010F05Rik
Wnt6
F11r
Fhl2
Greb1
Gpr161
Erfl
Olfr648
Defa6
Defa24
Cd300e
Frrs1
Fbxo21
Rnf214
Pcsk7
Klhl22
Slc39a2
Gas7
Aqp9
Fabp12
Slc14a1
Serpinb9e
Zkscan17
Gm13212
Olfr414
Tbce
Epha1
Cdca7
Ppef2
Dennd1b
Defb11
Zbtb10
Rnf157
Flacc1
Aplp1
Gm5622
Kifc3
Wwox
Stra6l
Zfp996
Rab32
Tceal9
Apol10a
Tango6
Exoc5
Ap5m1
Hoxd9
Hoxd8
Adar
Hat1
Smad5
Gm1070
Uba5
Acad11
Phc2
Cldn3
Amer3
Zfp449
Drd3
Utp25
Tbc1d13
Slc44a4
Olfr960
Smarcad1
Smap1
Tmsb10
Cdk18
Grhl3
Prl6a1
Kcng2
Oasl1
Rpgrip1
Hnrnpc
Stard10
Igsf3
Golga7b
Btbd35f26
Btbd35f16
Btbd35f11
Btbd35f10
Nck2
Lysmd2
H2az1
Acp5
Zfp42
Bcor
Vasn
H2-DMa
Brd2
Akap17b
Zbtb45
Fem1al
Lsm5
Kcng4
Slc10a6
Timm10b
Arfip2
Hoxa5
Hoxa4
H2az2
Gm12789
Cemip2
Ppp1r3e
Hoxb9
Sult1c1
Gm29802
Krtap6-5
Gm10228
Lemd2
Zfp982
Tnrc6b
Tmem114
Lcn4
Ogdhl
Lcn9
Glt6d1
Abca4
Slc40a1
Herpud2
Scgb1b27
Hemgn
Pan3
Ddah1
Slc44a1
Cd59a
Fgd4
Slco1a6
Pla2g5
Shmt1
Cmtm7
BC053393
Upk1a
Gm829
Snx24
BC061237
Ier2
Ednra
U2surp
B4galt5
Pccb
Tie1
Tmem11
Saa3
Susd5
Rin2
Il13
Gpkow
Cryz
Btbd8
Zfp944
Zfp758
Bin2
Cd27
Polr2h
Zp3r
Smco4
Hoxa7
Utrn
Pik3cb
Atp5g2
Txlng
Tfeb
Cdh12
Capza2
Cst9
Fam50b
Atp2c1
Ceacam14
Cdc42
Zdbf2
Efna3
Itprip
Man1a2
Cenpm
Reep3
Lpar1
Spry4
Bcl2l14
Mbp
Rdh5
Bloc1s1
Vmn2r4
Ccdc43
Atp6ap1l
Ptprs
Eml1
Tnnt3
Csta1
Vmn1r83
Upp1
Kif21b
Dsc2
Zfp110
Brd3
Coro1c
Klk14
Grip1
Ppp1r18
Nrm
Fasl
Traf3ip2
Esr1
Slc49a4
Sh2d4b
Olfr373
Trnt1
Ywhag
Spred2
Mrps24
Elac1
Irf2bp1
Plch1
Sall4
Tmem232
Rock2
Pdik1l
Rnf128
Enc1
Map3k1
Gm21119
4930467E23Rik
Ndst1
Rwdd2b
Nlrc3
Cwh43
Cdh1
Atf7ip2
Pwwp3a
Olfr372
Mllt1
Tbc1d2
Rpe
Lum
Tmod3
Pla2g7
Vmn2r16
Zyg11a
Dok2
Elf5
Hps3
Sec62
Olfr782
Cma2
Nat8f5
Ift46
Arcn1
Myoz2
Zfat
Lrrfip1
Gng12
Olfr1510
Lpcat4
Nr6a1
Sh3bp4
Gm21814
Oit1
Sgms1
Pdpn
Supt6
Sdf2
Plbd1
Wnt5a
Olfr1342
Bmp1
Cbln4
Otx1
Xntrpc
Xndc1
Rnf121
Lect2
Cbfa2t3
Enpp7
Eif2b5
Gse1
Ubxn11
Cd52
Lrrn4
Glyctk
Lpcat2b
Arsg
Sema4d
Plet1
Wfdc21
Heatr6
Rbm41
Kat6b
Usp28
Klhl24
Mtm1
Zfpm1
Trp53bp2
Dcaf5
Hao2
Igsf23
Hoxa3
Myo1d
Rgs5
Slc7a7
Smagp
Morc2a
Zfp936
Tnfrsf11a
Micu2
Gramd1a
Tank
Dao
Ffar4
Kcnj15
Olfr368
Tex48
Gsg1
Gm45521
Reps1
Akap7
Noct
Itfg2
Tdpoz3
Gabpb2
Gm614
Fbp2
2310009B15Rik
Arpc2
Dgka
Exoc6
4930474N05Rik
Ankrd50
Ap2a2
Zbtb7b
D630023F18Rik
Adh1
Dspp
Ezr
Sec14l1
Paqr5
Olfr785
Ppp1r14a
Morc3
Txnrd1
Gm15319
C130073F10Rik
Ptpn13
Wipf1
Ogt
Ppp1r35
Elf3
Zadh2
Tshz1
Mid1
Pth1r
Mapk11
Tiam1
Pou5f1
Ccser2
Abra
Snx12
4930486L24Rik
6430548M08Rik
Dguok
Arid2
Msx1
Csf2ra
Myo7b
Jarid2
Srrm1
Bnip3