ChIP-Atlas: Target genes

Potential target genes for Hdac3

Query protein: Hdac3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1668641 | Quadriceps Muscle
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hdac3's Target genes

◢ Hdac3: Average

◢ SRX2599799: 3T3-L1

◢ SRX2599800: 3T3-L1

◢ SRX2599801: 3T3-L1

◢ SRX2599802: 3T3-L1

◢ SRX6871352: 3T3-L1

◢ SRX6871353: 3T3-L1

◢ SRX6871354: 3T3-L1

◢ SRX17156728: Bone Marrow Cells

◢ SRX17156729: Bone Marrow Cells

◢ SRX17156730: Bone Marrow Cells

◢ SRX17156731: Bone Marrow Cells

◢ SRX21934344: Brown adipocytes

◢ SRX14674610: Brown adipose tissue

◢ SRX14674620: Brown adipose tissue

◢ SRX14674621: Brown adipose tissue

◢ SRX14674622: Brown adipose tissue

◢ SRX14674623: Brown adipose tissue

◢ SRX14674624: Brown adipose tissue

◢ SRX14674625: Brown adipose tissue

◢ SRX14674626: Brown adipose tissue

◢ SRX1890321: Brown adipose tissue

◢ SRX1890322: Brown adipose tissue

◢ SRX3284078: Dorsal root ganglia

◢ SRX3284079: Dorsal root ganglia

◢ SRX3284080: Dorsal root ganglia

◢ SRX3284081: Dorsal root ganglia

◢ SRX3284082: Dorsal root ganglia

◢ SRX3284083: Dorsal root ganglia

◢ SRX3284084: Dorsal root ganglia

◢ SRX3284085: Dorsal root ganglia

◢ ERX2789780: ES cells

◢ ERX2789782: ES cells

◢ ERX2789783: ES cells

◢ ERX2789784: ES cells

◢ ERX2789785: ES cells

◢ ERX2789786: ES cells

◢ SRX4887836: ES cells

◢ SRX4887837: ES cells

◢ SRX4887838: ES cells

◢ SRX4887839: ES cells

◢ SRX1158925: Hippocampus

◢ SRX1158926: Hippocampus

◢ SRX1158927: Hippocampus

◢ SRX1722785: Hippocampus

◢ SRX1722787: Hippocampus

◢ SRX100289: Liver

◢ SRX100290: Liver

◢ SRX100291: Liver

◢ SRX100292: Liver

◢ SRX100293: Liver

◢ SRX2039594: Liver

◢ SRX2039595: Liver

◢ SRX2039596: Liver

◢ SRX2039597: Liver

◢ SRX2039598: Liver

◢ SRX2039599: Liver

◢ SRX206481: Liver

◢ SRX206483: Liver

◢ SRX2375597: Liver

◢ SRX2375598: Liver

◢ SRX2375599: Liver

◢ SRX2375603: Liver

◢ SRX2375604: Liver

◢ SRX2375609: Liver

◢ SRX2375610: Liver

◢ SRX5543268: Liver

◢ SRX5543269: Liver

◢ SRX5543270: Liver

◢ SRX5543271: Liver

◢ SRX5543272: Liver

◢ SRX5543273: Liver

◢ SRX679440: Liver

◢ SRX679441: Liver

◢ SRX679442: Liver

◢ SRX679443: Liver

◢ SRX997769: Liver

◢ SRX997770: Liver

◢ SRX997771: Liver

◢ SRX997772: Liver

◢ SRX997773: Liver

◢ SRX997774: Liver

◢ SRX997775: Liver

◢ SRX997776: Liver

◢ SRX9843666: Lung cancer

◢ SRX9843667: Lung cancer

◢ SRX9843668: Lung cancer

◢ SRX9843669: Lung cancer

◢ SRX9843285: Lung tumors

◢ SRX9843286: Lung tumors

◢ SRX9843287: Lung tumors

◢ SRX9843288: Lung tumors

◢ SRX105109: Macrophages

◢ SRX105110: Macrophages

◢ SRX22541700: Macrophages

◢ SRX22541701: Macrophages

◢ SRX22541702: Macrophages

◢ SRX22541703: Macrophages

◢ SRX5007209: Macrophages

◢ SRX5007210: Macrophages

◢ SRX897073: Macrophages

◢ SRX9702016: Macrophages

◢ SRX9702017: Macrophages

◢ SRX9702018: Macrophages

◢ SRX9702019: Macrophages

◢ SRX9702020: Macrophages

◢ SRX9702021: Macrophages

◢ SRX9702022: Macrophages

◢ SRX9702023: Macrophages

◢ SRX1655669: Pro-B cells

◢ SRX1655670: Pro-B cells

◢ SRX1655671: Pro-B cells

◢ SRX1655672: Pro-B cells

◣ SRX1668641: Quadriceps Muscle

◢ SRX1668642: Quadriceps Muscle

◢ SRX1668643: Quadriceps Muscle

◢ SRX13365787: RAW 264.7

◢ SRX13365791: RAW 264.7

◢ SRX13365795: RAW 264.7

◢ Hdac3: STRING

Atp6v0c
Amdhd2
Hexa
Dpp7
Cdkn1a
Mcoln1
Washc2
Tcstv3
Lamp1
Gba
Zfp507
Mfsd1
Vps11
Phf23
Dvl2
Clcn7
Hoxa7
Hoxa3
Spns1
Cln3
Apobr
Bax
Srsf2
Mfsd11
Tpp1
Gramd1b
Prr5l
Commd9
Atp6v0b
B4galt2
Dph2
Zfp142
Bcs1l
Ilf3
Retreg2
Cnppd1
Npas2
Agrp
Atp6v0d1
Lztfl1
Ube2q1
Neurl2
Ctsa
Wdr81
Lsm12
G6pc3
Zbtb40
Marchf9
Cdk4
Scamp3
Ube2b
Cdkl3
Ruvbl2
Gys1
Tomt
Lamtor1
Osgep
Apex1
Ap5z1
Arid3b
Ubc
Slurp2
Lynx1
Kpna1
Gnas
Rab11b
Sh2d4b
Mthfr
Clcn6
Ntf5
Atp6v1c1
Hnrnph2
Gla
Furin
Nagpa
Zmym6
Tbl1x
Tnc
Slc36a1
Socs2
Plekhb1
Rad9a
Cltc
Vps33a
Slc41a3
Wsb1
Igf2r
Sgo1
Utp3
Atxn3
Slc38a7
Cuedc1
Hhatl
Kdm4c
Akt2
Med28
Angptl4
Tmem125
Fam110b
Trim24
Ifna13
Uvrag
Nup188
Dolk
Il31ra
Dhx35
Sspn
Cldn34d
Marchf8
Lpcat2
Thrap3
Rmnd1
Armt1
Pspn
Alkbh7
Pak4
Hivep2
Rdh5
Bloc1s1
Rnasek
0610010K14Rik
Stmn4
Mtdh
Cd63
Ppdpf
Tmem182
Commd4
Sumf1
Cp
Sh3bp5
Pip4p1
Nme1
Rft1
Nr1d1
Ggt5
Mmp9
Fbxo48
Rragc
Ehd2
Sde2
E030018B13Rik
Nrep
Brox
Aida
Cxxc1
Akap1
Ddx20
Wrap53
Trp53
Npas4
Cradd
St6galnac4
Dusp7
Zzz3
Rbks
Babam2
Akt1
Mrln
Lrch1
Herpud2
Insr
Efna1
Ptcd2
Mrps27
Mast4
Med23
Fam187a
Eftud2
Ccdc103
Slc35a5
Atg3
Acy3
Tbx10
Mrpl30
Mitd1
Trmo
Chd9
Nrbf2
Ube2j2
Slc35g3
Polr2a
Kdm6b
Kansl3
Fer1l5
Mrpl44
Ptp4a2
Rdm1
Cpsf1
Olfr806
Arid5a
Natd1
Htra2
Dqx1
Abca1
Gabarap
Eapp
Dnajb12
Pdk4
Itpkb
Rrn3
Cep162
Cenpu
Arid1a
Mmp28
Abhd6
Nup54
Taf12
Cd93
Mlf1
Pdap1
Bud31
Mettl21c
Timm9
2700049A03Rik
Fli1
Atp6v1h
Cd276
Smad7
B4galt1
Nudt9
Dyrk1a
Dph6
Irak2
Eps15
Ctsd
Snx18
Prkag2
Rsad2
Ppip5k2
Gin1
Gbp5
Ifitm3
Agt
Amotl2
Stx16
Ap1g1
Asmt
Ccny
Slc9a1
Usp3
Spop
Slc39a13
Ptprs
Nfkbia
Adh1
Arl2
Cars2
Lrrc8a
Myo18a
Taco1
Lipe
Shbg
Sat2
Ddc
Rhoj
Evi5
Asb2
Dcaf10
Wdr5
Mafb
Slc2a4
Dhx8
Psap
Tor4a
Smim17
Rpl21
Atoh8
Rbm34
Psmc6
Sgta
Dnajb9
Mlec
Gbp9
Fam124b
Cpeb1
Jup
Jph1
Guf1
Dcaf4
Cabp1
Zfp655
Ndufs7
Eif4g1
Tnfaip3
Nfat5
Shank3
Gm3488
Rpl35a
Iqcg
Itgb6
Zfp469
Zfp672
Prex2
Sh3bp5l
Pepd
Lrrc30
C1qbp
Col6a2
Rusc2
Stat3
Gadd45a
Chd3
Junb
Ptpre
Cd36
Abr
Mettl25
Ccdc59
Maz
Knstrn
Trim25
Tfrc
Arhgap31
Adcy7
Trim72
Tob2
Rasgrp3
Tnfaip1
Gpt
Tex14
Hps1
Smad5
Ppp6r2
Tedc1
Crip1
Zfp474
C9orf72
Proser1
Nhlrc3
Napepld
Txnip
Sft2d1
Cdh5
Gramd4
Cpt1a
Casq2
Tmem88b
Igsf10
Pomp
Dclre1b
Ap4b1
Rxrg
Lims2
Mpp7
Bms1
Gdpd5
Shpk
Ctns
Chac1
Vdac2
Tirap
Ech1
Clec2d
Gbp6
Fam168a
Dele1
Hmox1
Vps13d
Pnrc1
Plcd3
Acbd4
Per1
Tmem44
Mvd
Nsfl1c
Ctla2a
Upf2
Serinc3
Ubac2
Bet1
Lalba
Zhx3
Pde4b
Polr3f
Dzank1
Pelo
Sirt4
Exd2
Galnt15
Pgam2
Plpp3
Sgf29
Snrpc
Rarb
Gpaa1
Exosc4
Cops7a
Zfp148
Sec61b
Alg2
Islr
Nemp1
Hnrnpul1
Smad6
Pemt
Slc10a6
Prss52
Dnajc13
Nepn
Usp20
BC005624
Sec13
Ndufc2
Plcl2
Kansl2
Cacnb1
Azin1
Adk
Tmem101
Ap3m1
Slc35b1
Nup85
Tcap
Pnmt
Mrpl39
Polr3e
Stx4a
Sema6c
Uspl1
Rgcc
Phf14
Smox
Ndufa4
Thbd
Tmem242
Arih2
AW549877
Ankdd1a
Ctsl
Wwp1
Urgcp
Gpr19
Zfp36
Rarg
Snx14
Mapk6
Timmdc1
Vdac1
Cep120
Rab13
Rps27rt
Egfl7
Eif4e
Cox20
Soga1
Vps18
Txn1
Dmap1
Pabpn1l
Bcl3
Gstm7
Sae1
A530016L24Rik
Lair1
Zfp438
Ppp2r5a
Gtf3c4
Ddx31
Lax1
Gmfb
Tmem135
Ubb
Rrp1
Sema4c
Gnb2
Fzd4
Ramac
Bhlhe40
Ptpa
Crat
Jmjd1c
H3f3b
Zfp119a
Cyth3
Hhipl2
Lifr
Ptpn6
Psmd12
Grcc10
Tle4
Tsn
Map4k4
Cirbp
Tgfb1
Gstm6
Zcchc24
Rpl34-ps1
Rpl34
Gvin1
Gm4070
Hjurp
A730008H23Rik
Ublcp1
Dbp
P2rx7
Ints4
Yaf2
Igsf8
Sdhaf3
Rab33b
Ccdc57
Eif2s1
Atp6v1d
Ogt
Saa1
Gtf2b
Mlycd
Gbp4
Psmc1
Exosc5
Bckdha
Ltbp4
Coq5
Gls
Pdp2
Ankrd40
Ets2
Celsr3
Dennd6b
Akap7
Ptrhd1
Cenpo
Fbxo22
Ston2
Arntl
Taf13
Atad2b
L3hypdh
Jkamp
4930558K02Rik
Rbck1
Pygo1
Celf2
Acaa2
Prkce
Tjp3
Bnip3l
Mettl9
Atp5l
Mtss2
Hip1
Mphosph9
2810006K23Rik
Ryr1
Dgkz
Grn
Depp1
Tent2
Mrpl35
Rb1cc1
H2-T9
H2-T22
Gm6034
Fth1
Get1
Taf11
Anks1
Pde2a
Slc28a1
Zfp771
Lpin3
Gbp7
Zfp821
Coq10b
Ist1
Atp2b2
Csf1
Gtf2h2
Mrpl20
Deptor
Aadacl2fm1
Hspa4
St7
Vps35l
Rpf1
Klhl30
Chordc1
Cttnbp2nl
Suclg1
Hrc
Arrdc3
Trpm4
Ap2a2
Ndufa10
Nr2c1
Rex2
Rnase4
Ang
Arap3
Ociad1
Ston1
Ints10
Tmem262
Lyl1
Zfpl1
Cdca5
Tmem30a
Rsrc2
Kntc1
Gpi1
Prepl
Camkmt
Plcb4
Ccdc85a
Tchp
Ankrd12
Nedd4l
Armc5
9130023H24Rik
Tnfrsf12a
Thoc6
Hcfc1r1
Pla2g7
Rab11fip3
Wwox
Mtf2
Sh2d3c
Prr14l
Chchd2
Pfkfb3
Cldn15
Zfp661
Mrps5
Casz1
Zfp866
Ccl21b
Il11ra2
Gm2002
Gm13305
LOC100861969
Atxn7l1
Ubxn1
H4c14
Ccdc126
Gtf3c5
Osgin1
Trappc9
Psmd3
Usp48
Selenof
Hs2st1
Ubxn7
Ptx3
Spty2d1
Flt3l
Pgm1
Dusp3
Cfap97d1
Srcap
Sppl2b
Esr1
Atp7a
Eln
Napa
Itgb1
Otud7b
Ndufb7
Efcab2
Spata17
Gpatch2
Aph1b
B4galt3
Wbp2
Fam89b
Ehbp1l1
Calm2
Cdc14a
Ctla2b
Gm20594
Nr4a3
Sf3b3
Cog4
Fbxo30
Fscn1
Caprin1
Snrnp48
Rps6ka5
Rbm39
Ppp1r3d
Fam217b
Btrc
Snx12
Plin4
Acadl
Itga7
Mtrex
Dhx29
Cracr2b
Rap2a
Pigt
Bbc3
Robo4
Virma
Sost
Stag1
Kat6b
Rab3a
Tmem247
Gpx1
Mrpl1
Dnajc16
Casp9
U2surp
Baz1b
Gbp3
Csde1
Vti1b
Rchy1
Pafah2
Mcf2l
Srp19
Mfsd5
Abhd4
Stk4
Dad1
Tomm34
Lrch4
Fbxo24
Klhdc2
Tmem106c
Abcg1
Vamp8
St3gal6
Uck1
Ints7
Dtl
Trmu
Ptbp1
Them6
Psme3
Naa35
Rara
E2f2
Dmpk
Plk2
Hivep1
Actr3
Pttg1ip
Dtwd2
Gbp10
Emp1
Gm3448
Gm3417
Tcte3
Gm3435
Knop1
Iqck
Mttp
Calu
Cd47
Notch4
Rmc1
Srp54c
Srp54b
Igfals
Serpinb9
Ctss
Trmt10a
Bicral
Cyp46a1
Repin1
Ncbp3
Naaa
Elf1
Wbp4
Gm5111
Stxbp4
Cox11
Plod1
2510039O18Rik
Cryab
Hspb2
Arhgap12
Nop53
Ddx41
Nol11
Prrg2
Nosip
Drg2
Ankrd37
Pkn1
Ap5s1
Rsad1
Prmt5
Man1b1
Piezo1
Skp1
Hnrnpf
Cct4
S1pr4
Ndufc1
Ttc8
Sned1
Mypn
Tspan4
Polr2l
Mknk2
Kctd12
Gatb
Edem2
Kmt2d
Golga3
Txlnb
Rcbtb1
Fam136a
Pbld1
2310057M21Rik
Kbtbd13
Kpna2
Nvl
Ddit4
Atf2
Aars2
Med26
Prrc2c
Cpped1
Srp9
Cntfr
Arhgap6
Kcnj12
Ahcyl1
Casq1
Cfap45
Esyt2
Pik3ca
Rhob
Mylip
Stam
Calr
Atxn7l2
Urb1
Rbbp5
Apod
Marchf3
Mybpc1
Klf2
Acadm
Sh3gl1
Chaf1a
H2bc6
Chkb
H4c4
Txn2
Pex3
Adat2
Cpt1b
Acoxl
Kdm4a
Mettl1
Eef1akmt3
Loxl2
Erfe
Nexn
Sgms1
Med6
Frmd4b
1700042G07Rik
Cish
Mcl1
Inka1
Agbl5
Khdrbs1
Prdm11
Exosc3
Adamts1
Fap
Gdf15
Krr1
Vapa
Ndel1
Dgkh
Kcna5
Tsen15
Rabl2
C2cd2
Slc35a4
Apbb3
Nyx
Rps14
Lmcd1
Trim54
Srl
Dhrs7c
Rhobtb1
A930033H14Rik
Ilrun
Nudt15
Pdss1
Crem
Gtf2a1
Zfp623
Asb1
Lin54
Tpi1
Rsbn1
Krtcap2
Hadhb
Hadha
Mrps15
Lnx1
Ppif
Spsb2
Pop4
Col4a2
Col4a1
Pim1
Tatdn2
Mt2
Cebpa
Yars
S100pbp
Cdkn2aipnl
Map3k8
Qtrt1
Apc
Hsp90ab1
4930453N24Rik
Rev3l
Ptch2
Angptl2
Gabrr2
H2-L
H2-D1
Ssbp4
Gabpb2
Aasdh
Kif3b
Rapgef3
Marf1
Rars
Ctnnbip1
Nde1
Vim
Cox7a2l
Myoc
Timp3
Nfatc2
Tmem52
Des
Rnf10
Ier3
Flot1
5031439G07Rik
Nabp1
Per2
Rnft1
Wdr25
Wars
Smim40
Daxx
Nemf
Myd88
Acaa1a
Kcnn1
Hcar2
Smg7
Ciao3
Top3a
Smcr8
Mgat1
Homer1
Rrp15
Msl2
Nfatc1
Rps23
Eif3c
Usp21
A630076J17Rik
Tcf4
Psma6
Ndufs2
Adamts4
Erlin2
Nfil3
Arl4d
Atf3
Slc35f5
Srsf1
C1qtnf1
Tinagl1
Ppm1j
Tafa3
2900026A02Rik
Hhex
Srd5a3
Exoc3
Slfn5
Api5
Ppp1r3c
Pga5
Dpf1
Rffl
Sqor
Btg2
Tnrc6b
1110032A03Rik
Trp53rka
Bex6
Phlda1
Fdxacb1