ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706966 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◣ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Tcstv3
Snx18
Asic1
Gm815
Kank1
Cars
Alox5ap
Uts2r
Tex19.1
Aqp6
Greb1
Nfe2
Ric3
Ednrb
Coro2b
Cd93
Mnx1
Ubxn10
Pla2g2c
Frzb
Nrp1
Frmd4a
Dcaf4
Zfp879
Grm6
Cmc2
Cenpn
Nkx2-6
Cdk19
Ccna1
Zfp516
Cfap36
Sipa1l1
Gm4791
Lhx4
Kcng3
Zfp608
Akap17b
Spp2
Psmc6
Ero1a
Gmnc
Myt1l
Capn8
Tspan15
Atp2b2
Pmfbp1
Gm3383
Mcf2
Plekha7
Gm3173
Krt8
Tagln3
Gm10406
Megf11
Sema6d
2610042L04Rik
Kremen1
Chga
Stox2
Ndufaf4
Nptx2
Mlph
Sostdc1
Nhsl1
Lsg1
Fam43a
Atg4c
Neurod1
Slc17a8
Gm3696
Gm5820
Sgms1
Bcas2
Pax3
Zkscan1
Filip1
Timm8a1
Mtss1
Edar
Abhd6
St3gal1
Efna5
Lrrc52
Gm3752
Ypel1
Pax6
Lmo4
Slc6a5
Gm3739
Lsm14a
Senp6
Ablim1
Fbxw7
Gnat2
Gm12500
Ampd2
Txndc11
Tm9sf4
Slc44a3
Srp54c
Srp54b
1700024G13Rik
1700017B05Rik
Bin2
Copz1
Olfr806
Csrp3
Gm2956
Coro2a
Gm3488
Prkab1
Gsc
Cldn3
Gm3636
Hesx1
Lrmp
Fezf2
Lmo3
Numa1
Spaca7
Rnase12
Rnase11
Zfp362
Usp25
Rassf9
Pkdcc
Scamp2
Ttc32
Gm2237
Npcd
Cbx6
Ip6k3
Foxd3
Pakap
Mid2
Ust
Morc1
Grpel1
Tnfrsf19
Chmp1b
Med27
Kcnip1
Lmo1
Ets2
D7Ertd443e
Col6a6
Gnas
Gm21698
Gm21680
Rnf125
Sema5b
Raet1d
Ntn1
Vmn2r2
Sepsecs
Nt5c2
Ina
Mpp4
4921524J17Rik
Stx18
Tmeff1
Eml1
Ngfr
Esrrb
Gm51425
Gm15319
Angpt2
Aen
Hoxc11
Hoxc10
Gm21663
Prkab2
Gm33933
Bmt2
Alkbh5
Neil1
Commd4
Apbb2
Tle3
Fam171b
Dip2c
Cyrib
Gas2
Fancf
Pcdh1
1700003F12Rik
Gm21119
4930467E23Rik
1600014C23Rik
Il31ra
Lrrtm4
Olfr1286
Dap
Cxxc4
Ywhaq
Erg
Zfp960
Gja5
Foxn3
Peli3
Fech
Gm5796
Olfr1047
Olfr1046
Pnliprp2
Kat2a
Hspb9
AI661453
1700001C19Rik
Foxb1
Dpf2
Gm7244
Kdm4c
Dock10
Cox8c
Uts2b
Lrrc4c
Gm3411
Timm9
2700049A03Rik
Ptpn11
Nasp
Crybg3
Vax1
Bhlhe22
Cma2
Rab25
Ubqln4
Lamtor2
Daam1
Tshr
Rab27a
Pigbos1
Pigb
Taf1d
4931406C07Rik
Glis3
Ppia
Prdx3
Grk5
Arnt2
Galnt9
Kcnn2
Grm4
Afap1l1
Matn2
Rgs13
Adtrp
Olfr62
Pgpep1l
Olfml1
Enc1
Nav2
Zeb2
Syt7
Znrf4
Gm14410
Tnks2
Rab1a
Cul3
Tshz2
Slc10a4
Rasl11a
Ciao3
Gm17019
Trub1
Extl3
Hsd3b4
Gm10681
Arid1b
Wwox
Dusp23
Raet1e
Raet1c
Raet1b
Olfr1297
Sytl3
Gab1
Gm5165
Wt1
Ccr6
Astl
Htr3a
Zfp423
Wnt16
Tbc1d14
H1f0
Gcat
Etl4
Vmn2r5
Gm10471
5031410I06Rik
Megf9
Vmn2r4
Kif2c
Knl1
Slc4a4
Crx
Tmem229b
Gm3005
Gm2007
Gm4724
Gm2026
Gm14434
Gm14430
Gm14308
Tmco5
Arhgap36
Ptprz1
a
Fzd7
Cbx5
Setd4
Cbr1
Lix1
Aadacl2fm1
Brox
Aida
Gdf5
Cep250
Pcbd2
Dipk1c
Tnfaip8l2
Gpm6b
Pard6b
Hopx
Gm4450
P2ry12
T2
Ndst1
Npepps
Tnk2
Ifnb1
Fgd4
Itgb6
Zfp869
Frem1
Rbm47
Spry4
Bnc2
Aplp1
Olfr1282
Olfr1281
Rab38
Kifc3
Rdm1
Chn1
Chd7
Gm6712
Arap1
Prmt3
Htatip2
Neurod4
Arl4d
Dnajb8
Pik3r1
Cfap43
Ptpn12
Coa4
Pcdh12
Rab3gap1
Map3k19
Ntn4
Ppp3ca
Nfe2l3
Asic5
Snca
Prph
Gm1604b
Rsph3b
Invs
Erp44
Lef1
Zcchc24
Fndc3b
Dstn
Wdr35
Piezo1
Creb3l1
Mettl21e
Cldn34d
Olfr1113
Zfp978
Gm19410
AI429214
Aff3
Rufy1
Apobec2
Dmrt3
Smndc1
Ugt3a2
Zfp97
Pmp22
Pik3c2g
Tnfaip8l1
Fbln1
BC107364
Gm10354
Hmga1b
Hmga1
AI413582
Rcan3
Tox
Gper1
Atoh1
Dennd4a
Gm6710
Gm14391
Cyp2b10
Asb4
Tiam2
Rhbdd1
Krtap19-9b
Gria1
Mobp
Tti2
Olfr60
Olfr527
Gm38396
Cdh12
Zfp663
Nup93
Bsx
Plekhh3
Cntnap1
Ccr10
Sspn
Celf6
Uncx
Otulinl
Ndufb4
Eipr1
Tamm41
Slc15a5
Sh2d7
Aqp7
Npnt
Serac1
Gtf2h5
Zfp715
Wdcp
Pkmyt1
Zmat4
Paqr4
Cd300ld5
Cd300ld4
Cd300ld3
Dtwd2
Smarcal1
Prrc2c
Trim2
Sh3glb2
Miga2
Elmo2
Tmem30c
Phc2
Elavl4
Gjd2
Gphb5
1700123K08Rik
Zfp931
Cybb
Ddx19b
Aars
Mest
Olfm1
Atp8b4
Synpo
Mcf2l
Zbtb18
Tnip3
Ncald
Tcl1b5
Tcl1b3
Mpp7
Dlc1
Asf1b
Dclk2
Gap43
Dolpp1
Cdh23
Zfp703
Arhgef33
Taf12
Gmeb1
Jmjd1c
Inpp4b
Acp6
Trex1
Shisa5
Adar
Rce1
Nim1k
Toporsl
Gm773
Mafa
Gm2897
Nrf1
Maml1
Pxylp1
Strbp
Rab28
Rere
Grin3a
Klhl29
Nr6a1
Zfp566
Zfp260
Gm11837
Gabrg2
Lhx2
Sypl
Acbd5
Avl9
Tet3
Sulf1
Dlgap1
Ldlr
Lima1
Fbxw4
Qrfpr
Lrrn2
Psma8
Atp6v0a1
Tjp2
Mical2
Cilp
Mageh1
Dusp6
Prtg
Irf2bpl
Gga2
Galr3
Ptpn9
Kcnj14
Nfkbil1
Ddx39b
Atp6v1g2
Mbp
Asxl3
L3hypdh
Jkamp
Smco4
Pcdh7
Klf6
Zfp707
Xrcc5
Sgk1
Morf4l1b
Map3k7
2210418O10Rik
Ndufaf3
Impdh2
Dalrd3
Gm14296
Cdt1
Hmgxb4
Pde7b
Stk32a
Hhip
Ttll3
Vnn1
Atg7
Bcar3
Slc39a10
Ghrh
Zfp365
Map7
Teddm3
Glrx2
Gpr139
Arxes2
Rnf220
Baz1a
Ush2a
Armcx1
Akap6
Tatdn2
Rexo1
Cldn14
Rapgef5
Mark4
Exoc3l2
Hoxb5
Hoxb4
Hacd4
Gm4861
Ubiad1
Mtor
Ghrhr
Fras1
Scn8a
Atp8a1
Marchf7
Cotl1
Rorb
Olfr93
Acadl
Zdhhc16
Exosc1
Slc22a15
Sytl2
Gm14325
LOC666331
Gm11634
Zfp982
Abi2
Ndst4
Sohlh2
Pop4
Ppa2
Eef1akmt1
Mtus2
Wdr95
Spx
Nxph3
Gys2
Stfa3
Neurog2
Zfp981
Cdc14b
Eya1
Dmrta1
Nacc2
Osgin2
Nme7
Blzf1
Cdc42ep3
Pik3ip1
Tmem132d
Rusf1
Epha4
Gm14326
Usp1
Ankrd50
Msra
Enpp1
Gosr2
Arhgef28
Ctss
Fbxo32
Sulf2
Mrps28
Mrps10
Hgsnat
Zfhx4
Usp15
Gm527
Rpl27
Ifi35
Ctrb1
Tmem178b
Aldh8a1
Tex2
Klhl24
Shoc1
Ifnl3
Ifnl2
Fam214a
Ergic1
Zfp217
Olfr492
Mef2c
Otoa
Celf4
E030030I06Rik
Dpysl5
Btn2a2
Kpna1
Pgk1
Hexb
1810055G02Rik
Nnt
Ascl1
Oga
Hoxa1
Bambi
Chrna5
Irgm2
Oasl1
Sash1
Zcrb1
Pphln1
Tgfa
Rbm27
Aldh9a1
Vmn1r75
Tmem65
Wee2
Dennd11
Olfr1513
Slc25a40
Dbf4
Nsmaf
Zgrf1
Larp7
Trpm3
Ccpg1os
Ccpg1
4930503B20Rik
Phc1
Ms4a12
Susd6
Asmt
Chst7
Pxn
Zbtb8a
Ptk2b
Angpt1
Cd209a
Lpar6
Onecut2
Sp5
Abca4
Ccdc107
A330070K13Rik
Spred1
Fabp2
Rtn1
Cadps2
Zfp385b
Enox1
Nfasc
Zfhx2
Thtpa
Dio2
Ranbp9
Pdlim3
Prkar2b
Pknox1
Mia3
Unc5c
Ets1
Arhgap35
Xylt2
Hadh
Ctbp2
C1qa
Foxp1
Btla
Oser1
Arhgap33
Fgf1
Shroom4
Zfp3
Dnah7b
Hdac11
Rgs8
Ror1
Ebf2
Mrps9
Kdm2b
Atoh7
Mup4
Podn
Syt2
Cyp2j12
Emb
Trp53bp1
Raph1
Cerk
Cfap54
Slc12a6
Sms
Lce3a
Zdhhc21
Slc44a5
Kctd3
Olfr107
Slc9a9
Smchd1
Nol4
Foxp4
Csf2ra
Laptm4b
Myef2
Tm4sf4
Slc14a2
Tle4
Ext1
Kcnh8
Pik3r5
Olfr1274
Adora3
Dll1
Atp5g2
Ankrd36
Pdlim1
Olfr846
Myo1b
Adk
Mylk
Acly
Sctr
Cfap221
Slc10a1
Lats2
Pla2g2d
Sympk
Thrb
Mamdc2
Tmem147
Atp4a
Nutm1
Nop10
Ebf3
Stom
Tmcc2
Strip1
Capza2
Pm20d1
Bcas1
F2rl1
Taar9
Taar8c
Rspo4
Pik3cd
Slco1a4
Bmp7
Gmpr
Xrcc6
Desi1
Slc7a7
Arhgap32
Onecut3
Kctd9
Cdca2
Slc25a35
Rangrf
Ppfia2
Tbx20
Tbc1d23
Cipc
Plekha1
Rnase4
Ang
Got1l1
Ddc
Epn2
Id3
Tbpl1
Lama2
Myh3
Ackr1
Sox5
Taar7a
Dct
Saxo2
Efl1
Arhgef18
Ssu72
Plekhm1
Rtn4r
Gm8165
Kdm3b
Fbxo31
Cnpy1
Psap
Rpl22l1
Fgfr2
Abracl
Taar7b
Apbb1
Gm10710
Dchs2
Mib1
Bdnf
Nfatc4
Sall4
Dnaja4
Ptprn2
Hapln1
Ppp1r17
Ahcyl2
Kif16b
Vmn2r82
Myo10
Fzd5
Mrap
Gata6
Eno4
Myt1
Sem1
Cacng1
Srek1ip1
Cwc27
Rfc4
Cyth3
Rps26
Tspan12
Csf2rb
Rpn2
Mroh8
P2rx2
Lrcol1
Frem2
Cyyr1
Zfp808
Chrna4
Sec24b
Rps19
Lypd4
Dmrtc2
Nufip1
Gpalpp1
Cdh20
Cd59a
Anln
Prkaa1
Pon2
Cdh24
Parvg
Msx1
Kcnh2
H4bc24
H2bc23
H2ac24
H2ac23
Tmem52b
Slc25a25
Mrps25
2510009E07Rik
Spty2d1
Cfap58
Cep128
Rufy3
Sv2a
Sf3b4
Msi1
Baz2b
Akr1b3
Rbm18
Mrrf
Ubash3a
Ric8b
Inpp5k
Vmn2r102
Tbr1
H4c17
Onecut1
Aqr
Ankdd1a
Tcaf1
Stk33
Esr1
Arid4a
Serpinb2
Col11a1
Tmem107
Gpa33
Wdr20rt
Scml4
Ank3
Rxrg
Abtb2
Tcf7l1
Ifna13
Prpf40a
Arl6ip6
Clcc1
Scgn
Mro
Cdca7
Otol1
H4c18
Camsap2
Tent5a
Slc9c1
Lig3
Olfr225
Zfp91
Lpxn
Usp44
Mrps33
Mical3
Kcnj16
Aldh2
Skap1
Tmem178
Tcf15
Rab8b
Tex46
Kdm1a
Zfp991
Slc35f3
Cul2
Tsga10
Cacna1c
Hacd3
Olfr108
Ttc30a2
Ttc30a1
Arid3b
Aff1
Ddx58
Ptpro
Mad1l1
Cpeb4
Pop5