ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706967 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◣ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Cars
Asic1
Nfe2
Snx18
Alox5ap
Kank1
Frzb
Sipa1l1
Cd93
Frmd4a
Gm815
Coro2b
Ubxn10
Pla2g2c
Aqp6
Uts2r
Tex19.1
Dcaf4
Zfp879
Grm6
Ric3
Mcf2
Gm4791
Ccna1
Gmnc
Megf11
Cmc2
Cenpn
Cdk19
Lhx4
Med27
Tspan15
Prkab1
Coro2a
Krt8
Pakap
Zfp516
Sostdc1
Filip1
Mnx1
Zfp608
Npcd
Cbx6
Kcng3
Pmfbp1
Ednrb
Spp2
Rab38
Atg4c
Akap17b
Pax3
Zfp362
Slc17a8
Stx18
Nhsl1
Kremen1
Hesx1
Myt1l
Sgms1
Nptx2
Copz1
Tcstv3
Oga
Rnase12
Rnase11
Cfap36
Ndufaf4
Pkdcc
Scamp2
Tagln3
Chga
Grpel1
Neurod1
Nrp1
Lrmp
Atp2b2
Gsc
Cldn3
Bcas2
Kdm4c
Edar
Slc6a5
Tbc1d14
Rnf125
Numa1
Lmo4
Olfr492
Pgpep1l
Epha4
Stox2
Ablim1
Morc1
Olfr1286
Enc1
Tnk2
Psmc6
Ero1a
Bin2
Usp25
Lsm14a
Tmeff1
Lsg1
Fam43a
Bmt2
Fam171b
Zkscan1
Gja5
Gdf5
Cep250
Zfhx2
Thtpa
Aen
1600014C23Rik
Daam1
Ip6k3
1700024G13Rik
Bsx
Dap
Maml1
Ypel1
Lrrc52
Afap1l1
Ptpn11
Sema5b
Arnt2
Mlph
Timm8a1
Tm9sf4
Pnliprp2
Gper1
Znrf4
Spaca7
Sepsecs
Angpt2
Fgf1
Glis3
Enpp1
Senp6
Pmp22
Bcar3
Cdh23
Olfr1297
Pax6
Alkbh5
Plekha7
Taf1d
4931406C07Rik
Fndc3b
Gm5820
Lmo1
Ciao3
Prkab2
Sema6d
Lmo3
Hoxc11
Hoxc10
Kat2a
Hspb9
Pcdh1
Gnat2
Gm12500
Ampd2
Ndst1
Gm21663
Capn8
Olfm1
Slc44a3
Kcnip1
Prrc2c
Npepps
Gnas
Dolpp1
Gas2
Fancf
Cxxc4
Wee2
Dennd11
AI661453
1700001C19Rik
Slco1a4
4921524J17Rik
Foxb1
Tmco5
Rasl11a
Eml1
Hmga1b
Hmga1
AI413582
Peli3
St3gal1
Olfr93
1700017B05Rik
Nt5c2
Ina
Gab1
Ntn4
Sytl2
Mpp4
Olfml1
Apbb2
Pxn
Nasp
Akap6
Ntn1
Glrx2
Col6a6
Ttll3
Olfr1047
Olfr1046
Cdh12
Cldn34d
Abca4
Nrf1
Fezf2
Grm4
Ext1
Mia3
Cyrib
Ywhaq
Tnfrsf19
Snca
Gm21698
Gm21680
Sgk1
C1qa
1700003F12Rik
Vmn2r2
Dip2c
Gm5165
Dnajb8
Ghrhr
Lrrc4c
Foxd3
Prdx3
Grk5
Mid2
Smarcal1
Stfa3
Coa4
Ngfr
Kifc3
Dock10
Tiam2
Mylk
Zfp703
Ptpn12
Rbm47
Chmp1b
Cyp2j12
Tmem30c
Timm9
2700049A03Rik
Crybg3
Hdac11
Rgs8
Kcnn2
Susd6
Cybb
Trex1
Shisa5
Dusp6
Lrrtm4
Ddx19b
Aars
Matn2
Kif2c
Wnt16
Hoxb5
Hoxb4
Cdc14b
Neil1
Commd4
Gm7244
Ppia
Myh3
Pik3cd
Knl1
Tmem147
Atp4a
Creb3l1
Npnt
Ubiad1
Mtor
Galnt9
Toporsl
Lef1
Rassf9
Mpp7
Rab27a
Pigbos1
Pigb
Gys2
Uts2b
Extl3
T2
Rtn4r
Fbln1
Fech
AI429214
Msi1
Csrp3
Dusp23
Fzd7
Nxph3
Ptk2b
Hopx
Tmem178
Rgs13
Upf3a
Esrrb
Slc25a40
Dbf4
Aff3
Foxn3
Slc4a4
Pcdh8
Mtss1
Greb1
Astl
Ssu72
Gpr139
Cbx5
Trpm3
Ppp1r17
Pcdh12
Brox
Aida
Zcrb1
Pphln1
Sypl
Trp53bp1
Podn
Raph1
Grin3a
Olfr1282
Olfr1281
Dipk1c
Cadps2
Pik3c2g
Tspan12
Trim2
Mafa
Ptprz1
Sulf2
Fbxw7
Nnt
Ifnb1
Hoxa1
Btla
Ttc32
Oser1
Gm51425
Tnfaip8l1
Lrrn2
Lix1
Nrep
Rbm27
Adora3
Rnf220
Etl4
Taar7a
Taar7b
Pde7b
Qrfpr
Cul3
Zfp715
Tmem52b
Ctrb1
Spred1
Plekhh3
Cntnap1
Ccr10
4930503B20Rik
Tgfa
Arhgap33
Gabrg2
Psap
Olfr1113
Rpl22l1
Zfp707
Tbx20
Ets2
Chst7
Atoh7
P2ry12
Bambi
Irgm2
Plekha1
Syt7
D7Ertd443e
Pard6b
Chd7
Zfp423
Lce3a
Arhgef33
Tmem178b
Irf2bpl
Ndufb4
Mrap
Stom
Csf2rb
Myo1b
Vax1
Tshz2
Abi2
Ets1
Gpm6b
Fam214a
Dll1
L3hypdh
Jkamp
Phc2
Dmrta1
Cma2
Rab28
Chrna5
Zdhhc16
Exosc1
Rbm18
Mrrf
Erg
Scn8a
Capza2
Eya1
Dtwd2
Pon2
Riok3
Sv2a
Sf3b4
Ldlr
Mrps33
Xrcc6
Desi1
Ppp3ca
Htr3a
Gm19410
Celf4
Itgb6
Plekhm1
Cfap43
Otx1
Rab3gap1
Map3k19
Taar6
Arhgap35
Zbtb18
Trub1
Got1l1
Tnip3
1810055G02Rik
Zfhx4
Bhlhe22
Ttc30a2
Ttc30a1
Zbtb8a
Ebf2
Tshr
Map4k2
Cipc
Chrna4
Mest
Atp5g2
Cnpy1
Arhgap36
Tet3
Elavl4
Sms
Ust
Micu2
Atp6v0a1
Foxp1
Crx
Ankrd50
Apbb1
Mgat4a
Nkx2-6
Ccl26
Taf12
Gmeb1
Nfkbil1
Ddx39b
Atp6v1g2
Rcan3
Ank3
Arid1b
Smchd1
Foxp4
Nav2
Kpna1
Bcas1
Avl9
Armcx1
Angpt1
Ifnl3
Ifnl2
Pdlim1
Smco4
Lima1
Klf6
Ctbp2
Gria1
Dpf2
Acly
Tle3
Ptprn2
Slc39a10
Nr6a1
Sash1
Nsmaf
Acbd5
Slc9a9
Ccnq
Cacng1
Strip1
Kdm3b
Ugt3a2
Skap1
Cilp
Efna5
Galr3
Tm4sf4
Mamdc2
Asf1b
Pop5
Bdnf
Fgf15
Ccpg1os
Ccpg1
Hmgxb4
Arxes2
Saxo2
Efl1
Fbxo31
Wscd1
Adtrp
Morf4l1b
Zcchc24
Prkar2b
Olfr60
Olfr527
Optc
Scg2
Mfng
Rxrg
Zfp3
Hsd3b4
Gm10681
Sctr
Cfap221
Acadl
Tent5a
Zgrf1
Larp7
Cfap54
Pitpnm1
Cdk2ap2
Atoh1
Frem1
Epn2
Dmrt3
Slc22a15
Atp1a1
Tatdn2
Bnc2
Arhgef18
Nfatc4
Uncx
Kif16b
Rere
B3galt5
H4bc24
H2bc23
H2ac24
H2ac23
H4c17
Zfp663
Arhgef2
Nt5c3b
Klhl10
Tcf7l1
Fgd4
Myt1
Mtf1
Mgam
Laptm4b
Dnaja4
Zfp869
Tcf15
Dlc1
Olfr107
Akr1b3
Syt2
Med16
Pm20d1
Gjd2
Rce1
Atp8b4
Arap1
Dlgap1
Synpo
Ankrd36
Zfp960
Agr2
Raet1d
Parvg
6430548M08Rik
Gga2
Tmem30a
Wdcp
Ppfia4
Iglon5
Vangl2
Serac1
Gtf2h5
Jagn1
Cidec
A330070K13Rik
Exosc9
Cotl1
Nfasc
Cyp2b10
Drd2
Smndc1
Serpinb2
Gm8773
Pcbd2
Snw1
Mro
Eipr1
Hmcn1
Slc25a25
Tcl1b5
Tcl1b3
Sulf1
Cpeb4
Fgf8
Slc16a7
Zfp407
Slc10a1
Atp8a1
F2rl1
Slc7a7
Nol4
Spry4
Rab1a
Dnaic2
Sytl3
Tmem229b
Ubap1l
Zfp991
Tmcc2
H4c18
Otol1
Celf6
Gm9508
Gm10272
Gm19402
Uqcc3
Ubxn1
Lbhd1
1810009A15Rik
Scml4
Irx4
Olfr986
Kdm2b
Mib1
Rorb
Fzd8
Timeless
Apon
Vnn1
Zfp462
Tmem202
Hexa
Marco
Ackr1
Hacd4
Mef2c
Kcnh2
Arid1a
Scrt2
Slc15a5
Rtn1
Usp3
Hoxb3
Hoxb2
Chmp6
Tjp2
Rab25
Ubqln4
Lamtor2
Il17ra
Gspt1
Gm1113
Slc10a4
Zbtb12
Ehmt2
Lect2
Kcnk3
Rnase4
Ang
Iapp
Tle4
P2rx2
Lrcol1
Atg7
Cnot6l
Lpar6
Lrig3
Pcbp4
Abhd14b
Abhd14a
Dct
Rraga
Aldh8a1
Tnks2
Kazn
Rufy1
Zfp473
Vrk3
Rassf3
Pxylp1
Baz2b
Tbc1d23
Cacna1c
Sh2d4a
Ivd
Lypd10
Hadh
Gm29797
Kcnip3
Pcdh7
Cd200
Ccdc30
Gosr2
Elavl2
Ccdc107
Zdhhc21
Clcc1
Msra
Fbxo32
Ppp3r1
Invs
Erp44
Elmo2
Dclk2
Prdm1
Tbr1
Tex46
Kdm1a
Lrp2bp
Cibar2
Ankdd1a
Rhbdd1
Tbpl1
Nup93
Jph3
Gm3383
Mobp
Lrriq1
Zfp982
Gemin8
Spty2d1
Ttc30b
Kncn
Neurod4
Col3a1
Nrcam
Tmem65
Nim1k
Mcf2l
Gm14325
Sox5
Zfp365
Map7
Raet1e
Raet1c
Raet1b
Zfp566
Zfp260
Gphb5
Rab8b
Tmem107
Rfc4
Gramd1b
Gm10471
5031410I06Rik
Pdlim3
Adk
Cul2
Usp17le
Acat3
Usp44
Zar1
Gm4450
Hspa8
Ror1
Myo10
Ntf3
Mup4
BC048507
Slc35f3
Gria3
Xpnpep2
Xrcc5
Map6
Tac4
Ahcyl2
Slc5a3
Mrps6
Fchsd2
Gata6
Fam126a
Commd8
Shroom3
Iqschfp
Iqcj
Gmpr
Tmco3
Dcun1d2
a
Skor1
Pik3r1
Sall4
Gpa33
Mtus2
Zfp385b
Mical2
Ints4
Lingo3
Edem1
Ptms
Lag3
Kcnma1
Pla2g7
Baz1a
Eef1akmt1
Bcor
Agpat3
Tcf7l2
Fam13b
Gm4861
Cyth3
Phf6
Armc12
Txndc11
Smad5
Clpsl2
Clps
Fbxw4
Dio2
Tcaf1
Myef2
Enox1
Taar9
Taar8c
Adar
Trafd1
Rnf26
Otoa
Kctd3
Lama2
Arhgap28
Ank2
Dstn
Pdcd4
Six1
Rusf1
Zfp217
Gm527
Lama1
Shroom4
Spx
Cdca7
Elk4
Mtus1
Pik3ap1
Dennd4a
Gm3739
Jmjd1c
Gm3173
Ccr6
Adcy8
E030030I06Rik
Vmn2r5
Gng3
Bscl2
Srp54c
Srp54b
Tpd52
Krtap19-9b
Tra2a
Gm3696
Zfp97
Mageh1
Lingo2
Fam76b
Cep57
Msx1
Ankrd6
Tbx5
Gm6712
Usp17lb
Usp17la
Col11a1
Ogn
Smug1
Meis3
Fam222b
Nt5e
Ermn
Cyp7a1
Nrde2
Vmn1r75
Ovca2
Dph1
Marchf7
Optn
Ush2a
Ankrd1
Gm14410
Prkaa1
Pde4d
Rnase9
Actn4
Irx5
Insyn2b
Lhx5
Ranbp9
Smim8
Alk
Wt1
Txndc2
Hexb
Gm15319
P4ha2
Cep120
Jam3
Inip
Rln3
Il27ra
Sertad2
Ppfia2
Ubr5
Tmem171
Tbc1d15
Asxl3
Hip1
Lipg
Ndrg1
Mpzl1
Usp15
Kitl
Pitx1
Ucma
Megf9
Acaa2
Frem2
Inpp5k
Zfp978
H1f0
Gcat
Npas3
Otud1
Hey2
Wdr17
Tgfbr1
Prmt3
Htatip2
C2cd5
Rell1
2610042L04Rik
Cdc42ep3
Zc3h12c
Ric8b
Vmn2r4
Zc2hc1c
Acyp1
Chst5
Nufip1
Gpalpp1
Gm17660
Tctex1d1
Npffr2
Il18rap
Smpdl3a
Fabp7
Cldn10
Tubb1
Ctsz
Axin2
Map3k7
Crppa
Mrpl45
Add1
Atxn7l1
Fzd10
Tmem273
Gm3752
Col12a1