ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706976 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◣ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Tcstv3
Snx18
Asic1
Cars
Mnx1
Kank1
Nfe2
Alox5ap
Greb1
Ednrb
Ubxn10
Pla2g2c
Ric3
Cd93
Gm815
Cmc2
Cenpn
Usp25
Aqp6
Lrrc52
Filip1
Dcaf4
Zfp608
Frmd4a
Lhx4
Nkx2-6
Nrp1
Atg4c
Kdm4c
Zfp879
Grm6
Zfp516
Coro2b
Uts2r
Tex19.1
Frzb
Cdk19
Spp2
Vax1
Gas2
Fancf
Zfp423
Col6a4
Sipa1l1
Mcf2
Ndufaf4
Copz1
Myt1l
Ccna1
Plekha7
Tagln3
Senp6
Txndc11
1700017B05Rik
Slc17a8
Sema6d
Nptx2
Gnas
Sepsecs
Pax3
Dock10
Fam171b
Cldn3
Stx18
Ctrb1
Alkbh5
Arid1b
Raet1d
Fezf2
Olfr806
Chga
Daam1
Abhd6
Ypel1
Lmo1
Cldn34d
Snca
Ablim1
Coro2a
Armcx1
Chst7
Bhlhe22
Psmc6
Ero1a
Tnfrsf19
Nt5c2
Ina
Timm8a1
Sgk1
Ttc32
Pmfbp1
Tm9sf4
Gsc
Morc1
Rnase12
Rnase11
Slc6a5
Lix1
Raet1e
Raet1c
Raet1b
Vmn2r2
Tle3
Stox2
Lmo4
Taf1d
4931406C07Rik
Zkscan1
Grpel1
Zfhx4
Gjd2
Col6a6
Timm9
2700049A03Rik
Atp2b2
Tti2
Htr3a
Lrmp
Gm5820
Prmt3
Htatip2
Capn8
Kat2a
Hspb9
Hmgxb4
Tmem178b
Mid2
4921524J17Rik
Slc10a4
Myo10
Med25
Fuz
Dpf2
Chmp1b
Tmeff1
Dip2b
Prkab1
Prkn
Gmnc
Ust
Neil1
Commd4
Ptpn12
Olfr1532-ps1
Tspan15
Csrp3
Gabrg2
Mlph
Ets2
Rere
Olfr1286
Olfml1
Avl9
Vmn2r5
Dct
Prkab2
Brox
Aida
Syt7
Zfp663
Gm3173
Gnat2
Gm12500
Ampd2
Bcar3
AI661453
1700001C19Rik
Ciao3
Tshr
Kcng3
Olfr1047
Olfr1046
Sulf1
Gtf2a1
Ndst1
Wwox
Tet3
Rassf9
Smarcal1
Rusf1
Knl1
Glis3
Spaca7
Edar
Rhbdd1
Lsg1
Fam43a
Ppia
Dusp23
Invs
Erp44
Npnt
Ank3
Neurod1
Mical2
Cfap36
Sgms1
Npepps
Crybg3
Rspo4
Pnliprp2
Ifnb1
Th
Gm3752
Gm2956
Cdh12
Rab28
Dip2c
Stk32a
Ntn1
Rab25
Ubqln4
Lamtor2
Ptdss1
Mterf3
Tmco5
Tmcc2
Erg
Tshz2
Extl3
St3gal1
Rtn1
Lrrn2
Cpeb4
Afap1l1
Cox8c
Rufy1
Bcas2
Foxp1
Cdh10
Efna5
Chn1
Zfp982
Angpt2
Hsd3b4
Gm10681
Krt8
Arap1
Ppp3ca
Hspa8
Lingo4
Mrps28
Kcnn2
Ddc
Pde4d
Gm5165
Olfr1282
Olfr1281
Peli3
Dmrta1
AI429214
Mobp
Nrf1
Slc44a3
Gja5
Pkdcc
Olfr846
Eml1
Etl4
Ivd
Foxd3
P2rx2
Lrcol1
Apbb2
Gm4791
Lrrtm4
Gm51425
Srp54c
Srp54b
Lmo3
Dstn
Stfa3
Tmem65
Kif2c
Ctbp2
Celf4
Nxph3
Fbxw7
Ttll3
Dennd4a
Itgb6
Rock2
Zfp827
Atp6v0a1
Pxylp1
Kitl
1600014C23Rik
Dipk1c
Aff3
Elmo2
Rab38
Setd4
Cbr1
Gm3383
Sohlh2
Pcdh7
Gap43
Tnk2
1700003F12Rik
Prdx3
Grk5
Lsm14a
Dpysl5
Med27
Tmem147
Atp4a
Lce3a
Ppfia4
Enox1
Olfr60
Olfr527
Cd9
Taf12
Gmeb1
Gm7244
Mrap
Gdf5
Cep250
Ywhaq
Rgs13
Mageh1
Rasl11a
Fbxo31
Akt3
Il31ra
Pde7b
Eef1akmt1
Arl4d
Galnt9
Nr6a1
Saxo2
Efl1
Zc2hc1c
Acyp1
4930503B20Rik
Gm7592
Cacng1
Lin28a
Vmn2r7
Kremen1
Trex1
Shisa5
Dll1
Ptpn11
Tatdn2
Ferd3l
Sytl3
Tmem74
Fam219a
Dnaic1
Kcnip1
Sh2d7
Pard3b
Acbd5
Zdhhc16
Exosc1
Gm3739
Ric8b
Rps26
E030030I06Rik
Mpp7
Piwil1
Slc15a5
Npcd
Cbx6
Gria1
Ptprg
Grb2
Pygl
Hdac11
Tmem202
Hexa
Dcaf15
Pax6
Gm14325
Dmrt3
Schip1
Fam110b
Zfp869
Kazn
Crppa
Maged1
Pmp22
Rdm1
Ngfr
Abracl
Mrpl22
Gemin5
Tnks2
Rab1a
Hnrnpl
Ech1
Zbtb39
Tac2
Bambi
Lhx5
Atp6v1e2
Ppp1r2
Gm4450
Dnah7b
Adtrp
Kpna1
Olfr1297
Zfp566
Zfp260
Ccl26
Ormdl3
Lrrc3c
Tbc1d14
L3hypdh
Jkamp
Pramel48
Gm3286
Arnt2
Dap
Bin2
Prtg
Muc15
Rnf2
Acacb
Tmem242
Nhsl1
Fbxw4
Asmt
Cfap54
Crx
Vnn1
Sema5b
Inip
Sspn
Fgd4
Thrb
Scgn
Pbld2
Hnrnph3
Sytl2
Oasl1
Lpar6
Eipr1
Slc25a25
Mgam
Wdr12
Carf
Ntn4
Gpm6b
Skil
Krt26
Bmt2
Rce1
Rcan3
Trp53bp1
Ankrd50
Spry4
Cacng4
Esrrb
Uts2b
Foxn3
Lrrc4c
Usp44
Tjp2
Tcf15
Wdr17
Rnase9
Atxn1
Zfpm1
Cpa2
Trafd1
Grm4
Zfp217
Zfp36
Plekhg2
Trub1
Ank2
Ttll8
Megf11
Matn2
Nacc2
Baz2b
Cxxc4
Tbpl1
Zfp991
Raph1
Gm14326
Zfp362
Chrna5
Elovl5
Cemip2
Metrn
Fbxl16
Cd300lg
Slc10a1
Gys2
Dnaja4
Commd8
Vmn2r4
Fgf12
Scrn1
Ccdc107
Hmga1b
Hmga1
AI413582
Elavl4
Nufip1
Gpalpp1
Negr1
Adamts18
Bsx
Tamm41
Gm6710
Gm14391
Rufy3
Akr1e1
Map1b
Hesx1
Asf1b
Lrrtm1
Arhgap36
Chrm1
Pm20d1
Myl1
Nlrc5
Psme4
Rab3gap1
Map3k19
Hes7
Aloxe3
Zar1
Fbxo32
Shkbp1
Tmem107
C1ql1
Npy6r
Gm3411
Ndufb4
Strip1
Ebf2
Dlc1
Ccdc88c
Cnpy1
Smco4
Eya1
Crtam
Romo1
Nfs1
Foxb1
Apbb1
Gpr139
Frat1
Rapgef5
Fech
Scamp2
Pgk1
Pakap
Akap17b
1700024G13Rik
Rnf125
Sostdc1
Hexb
Maml1
Cyrib
Enpp1
Mpp4
Hoxc11
Hoxc10
1810055G02Rik
Nnt
Epha4
Ascl1
Plekhh3
Cntnap1
Ccr10
Pgpep1l
Numa1
Dtwd2
Oga
Hoxa1
Olfr93
Hoxb5
Hoxb4
Irgm2
Tmem30c
Olfr492
Olfr1113
Enc1
Fzd7
Sash1
Zcrb1
Pphln1
Glrx2
Nasp
Tgfa
Cybb
Pcdh1
Cbx5
Rbm27
Rbm47
Ip6k3
Aldh9a1
Vmn1r75
Qrfpr
Lef1
Cul3
Dolpp1
Wee2
Dennd11
Olfr1513
Slc25a40
Dbf4
Tiam2
Astl
Gm21698
Gm21680
Gm21663
Akap6
Cdh23
Gab1
Znrf4
Nsmaf
Zgrf1
Larp7
Trpm3
Cma2
Gper1
Ccpg1os
Ccpg1
Sulf2
Ddx19b
Aars
Rab27a
Pigbos1
Pigb
Phc1
Ms4a12
Ccr6
Dnajb8
P2ry12
Susd6
Coa4
Pxn
Zbtb8a
Ghrhr
Pcdh12
Olfm1
Ptk2b
Angpt1
Ugt3a2
Cd209a
Zfp703
Kifc3
Onecut2
Creb3l1
Sp5
Abca4
Hopx
A330070K13Rik
Morf4l1b
Mtss1
Pard6b
T2
Arhgef33
Spred1
Fabp2
Fndc3b
Arxes2
Nav2
Cadps2
Zfp385b
Wnt16
Uncx
Nfasc
Zfhx2
Thtpa
Dio2
Ranbp9
Irf2bpl
Prrc2c
Pdlim3
Prkar2b
Pknox1
Mia3
Unc5c
Ets1
Arhgap35
Xylt2
Hadh
Gga2
C1qa
Aadacl2fm1
Cdc14b
Btla
Oser1
Arhgap33
Fgf1
Ifnl3
Ifnl2
Shroom4
Zfp3
Rgs8
Ror1
Hacd4
Aen
Mrps9
Kdm2b
Atoh1
Ptprz1
Atoh7
Mup4
Gm4861
Podn
Syt2
Fam214a
Cyp2j12
Emb
Gm14410
Phc2
Cilp
Cerk
Zbtb18
Slc12a6
Sms
Rsph3b
Celf6
Zdhhc21
Slc44a5
Kctd3
Olfr107
Slc9a9
Acadl
Ubiad1
Mtor
Smchd1
Mef2c
Nol4
Chd7
Foxp4
Csf2ra
Laptm4b
Myef2
Tm4sf4
Scn8a
Slc14a2
Tle4
Zeb2
Ext1
Galr3
Kcnh8
Pik3r5
Olfr1274
Adora3
Atp5g2
Ankrd36
Serac1
Gtf2h5
Pdlim1
Zfp715
Zfp960
Myo1b
Adk
Mylk
Ldlr
Acly
Sctr
Cfap221
Abi2
Lats2
Nfkbil1
Ddx39b
Atp6v1g2
Pla2g2d
Sympk
Mamdc2
Wdcp
Nutm1
Nop10
Ebf3
Trim2
Krtap19-9b
Stom
Sh3glb2
Miga2
Capza2
Slc4a4
Bcas1
F2rl1
Taar9
Taar8c
Pik3cd
Slco1a4
Bmp7
Gmpr
Xrcc6
Desi1
Slc7a7
Arhgap32
Onecut3
Kctd9
Cdca2
Slc25a35
Rangrf
Pik3c2g
Ppfia2
Tbx20
Tbc1d23
Cipc
Plekha1
Rnase4
Ang
Tnip3
Mafa
D7Ertd443e
Lima1
Got1l1
Epn2
Id3
Zfp931
Lama2
Myh3
Ackr1
Sox5
Pik3r1
Taar7a
Rnf220
Zcchc24
Arhgef18
Ssu72
Map3k7
Plekhm1
Rtn4r
Gm8165
Atp8a1
Kdm3b
Ctss
Marchf7
Psap
Spx
Rpl22l1
Fgfr2
Taar7b
Gm10710
Dchs2
Mib1
Mest
Bdnf
Nfatc4
Sall4
Ptprn2
a
Hapln1
Ppp1r17
Ahcyl2
Tnfaip8l1
Kif16b
Vmn2r82
Gm15319
Fzd5
Gata6
Eno4
Adar
Myt1
Sem1
Srek1ip1
Cwc27
Slc22a15
Ncald
Bnc2
Rfc4
Cyth3
Tspan12
Csf2rb
Rpn2
Mroh8
Dusp6
Frem2
Cyyr1
Zfp808
Chrna4
Sec24b
Rps19
Lypd4
Dmrtc2
Cdh20
Cd59a
Anln
Prkaa1
Pon2
Cdh24
Parvg
Msx1
Kcnh2
H4bc24
H2bc23
H2ac24
H2ac23
Tmem52b
Dlgap1
Klf6
Tmem229b
Mrps25
2510009E07Rik
Spty2d1
Cfap58
Cep128
Sv2a
Sf3b4
Msi1
Akr1b3
Rbm18
Mrrf
Ubash3a
Grin3a
Nfe2l3
Inpp5k
Sypl
Vmn2r102
Tbr1
H4c17
Onecut1
Aqr
Ankdd1a
Tcaf1
Stk33
Esr1
Arid4a
Serpinb2
Zfp707
Col11a1
Nup93
Gpa33
Gphb5
Fbln1
Wdr20rt
Scml4
Rxrg
Abtb2
Tcf7l1
Atp8b4
Nim1k
Ifna13
Prpf40a
Arl6ip6
Clcc1
Atg7
Gm21119
Mro
Cdca7
Otol1
H4c18
Camsap2
Tent5a
Slc9c1
Lig3
Olfr225
Zfp91
Lpxn
Mrps33
Mical3
Kcnj16
Aldh2
Zfp978
Skap1
Slc39a10
Tmem178
Rab8b
Baz1a
Tex46
Kdm1a
Slc35f3
Cul2
Tsga10
Cacna1c
Hacd3
Olfr108
Ghrh
Ttc30a2
Ttc30a1
Arid3b
Aff1
Ddx58
Ptpro
Mad1l1
Pop5
Optn
Mfng
Nt5e
Whrn
Dclk2
Ccnq
Aldh8a1
Gramd1b
Prdm1
Uqcc3
Ubxn1
Lbhd1
1810009A15Rik
Gm19410
Gm38396
Phactr3
Ogn
Chmp6
Npffr2