ChIP-Atlas: Target genes

Potential target genes for Hdac3

Query protein: Hdac3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1722785 | Hippocampus
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hdac3's Target genes

◢ Hdac3: Average

◢ SRX2599799: 3T3-L1

◢ SRX2599800: 3T3-L1

◢ SRX2599801: 3T3-L1

◢ SRX2599802: 3T3-L1

◢ SRX6871352: 3T3-L1

◢ SRX6871353: 3T3-L1

◢ SRX6871354: 3T3-L1

◢ SRX17156728: Bone Marrow Cells

◢ SRX17156729: Bone Marrow Cells

◢ SRX17156730: Bone Marrow Cells

◢ SRX17156731: Bone Marrow Cells

◢ SRX21934344: Brown adipocytes

◢ SRX14674610: Brown adipose tissue

◢ SRX14674620: Brown adipose tissue

◢ SRX14674621: Brown adipose tissue

◢ SRX14674622: Brown adipose tissue

◢ SRX14674623: Brown adipose tissue

◢ SRX14674624: Brown adipose tissue

◢ SRX14674625: Brown adipose tissue

◢ SRX14674626: Brown adipose tissue

◢ SRX1890321: Brown adipose tissue

◢ SRX1890322: Brown adipose tissue

◢ SRX3284078: Dorsal root ganglia

◢ SRX3284079: Dorsal root ganglia

◢ SRX3284080: Dorsal root ganglia

◢ SRX3284081: Dorsal root ganglia

◢ SRX3284082: Dorsal root ganglia

◢ SRX3284083: Dorsal root ganglia

◢ SRX3284084: Dorsal root ganglia

◢ SRX3284085: Dorsal root ganglia

◢ ERX2789780: ES cells

◢ ERX2789782: ES cells

◢ ERX2789783: ES cells

◢ ERX2789784: ES cells

◢ ERX2789785: ES cells

◢ ERX2789786: ES cells

◢ SRX4887836: ES cells

◢ SRX4887837: ES cells

◢ SRX4887838: ES cells

◢ SRX4887839: ES cells

◢ SRX1158925: Hippocampus

◢ SRX1158926: Hippocampus

◢ SRX1158927: Hippocampus

◣ SRX1722785: Hippocampus

◢ SRX1722787: Hippocampus

◢ SRX100289: Liver

◢ SRX100290: Liver

◢ SRX100291: Liver

◢ SRX100292: Liver

◢ SRX100293: Liver

◢ SRX2039594: Liver

◢ SRX2039595: Liver

◢ SRX2039596: Liver

◢ SRX2039597: Liver

◢ SRX2039598: Liver

◢ SRX2039599: Liver

◢ SRX206481: Liver

◢ SRX206483: Liver

◢ SRX2375597: Liver

◢ SRX2375598: Liver

◢ SRX2375599: Liver

◢ SRX2375603: Liver

◢ SRX2375604: Liver

◢ SRX2375609: Liver

◢ SRX2375610: Liver

◢ SRX5543268: Liver

◢ SRX5543269: Liver

◢ SRX5543270: Liver

◢ SRX5543271: Liver

◢ SRX5543272: Liver

◢ SRX5543273: Liver

◢ SRX679440: Liver

◢ SRX679441: Liver

◢ SRX679442: Liver

◢ SRX679443: Liver

◢ SRX997769: Liver

◢ SRX997770: Liver

◢ SRX997771: Liver

◢ SRX997772: Liver

◢ SRX997773: Liver

◢ SRX997774: Liver

◢ SRX997775: Liver

◢ SRX997776: Liver

◢ SRX9843666: Lung cancer

◢ SRX9843667: Lung cancer

◢ SRX9843668: Lung cancer

◢ SRX9843669: Lung cancer

◢ SRX9843285: Lung tumors

◢ SRX9843286: Lung tumors

◢ SRX9843287: Lung tumors

◢ SRX9843288: Lung tumors

◢ SRX105109: Macrophages

◢ SRX105110: Macrophages

◢ SRX22541700: Macrophages

◢ SRX22541701: Macrophages

◢ SRX22541702: Macrophages

◢ SRX22541703: Macrophages

◢ SRX5007209: Macrophages

◢ SRX5007210: Macrophages

◢ SRX897073: Macrophages

◢ SRX9702016: Macrophages

◢ SRX9702017: Macrophages

◢ SRX9702018: Macrophages

◢ SRX9702019: Macrophages

◢ SRX9702020: Macrophages

◢ SRX9702021: Macrophages

◢ SRX9702022: Macrophages

◢ SRX9702023: Macrophages

◢ SRX1655669: Pro-B cells

◢ SRX1655670: Pro-B cells

◢ SRX1655671: Pro-B cells

◢ SRX1655672: Pro-B cells

◢ SRX1668641: Quadriceps Muscle

◢ SRX1668642: Quadriceps Muscle

◢ SRX1668643: Quadriceps Muscle

◢ SRX13365787: RAW 264.7

◢ SRX13365791: RAW 264.7

◢ SRX13365795: RAW 264.7

◢ Hdac3: STRING

Txndc11
Ilf3
Ankrd12
Sppl3
Hexa
Rcbtb1
Dph2
B4galt2
Atp6v0b
Kdm4c
Ube2q1
Chrnb2
Gns
Retreg2
Cnppd1
Slc23a3
Gnpda1
Ypel5
Slc35a5
Atg3
Atxn3
Hmgxb4
Atp6v0c
Amdhd2
Mfsd1
Zfp507
Sumo3
Zfp358
Mcoln1
Dnajc13
Mtdh
Supt4a
Trpm7
Aldh9a1
Ftl1
Bax
Atp6v1c1
Rragc
Pip4p1
Osgep
Apex1
Lamp1
Zzz3
Rcc1l
Gtf2ird2
Aff4
Natd1
Phf20
Marchf8
Hps5
Gtf2h1
Hsdl1
Dnaaf1
Zfp607b
Crebrf
Pink1
Wee1
Cc2d1b
Igf2r
Creb3l3
Map2k2
Cdr2l
Pkd1
Dpysl2
Aspscr1
Nup188
Dolk
Tom1
Clcn7
Il31ra
Naa25
Rfx1
Lipt2
Secisbp2l
Hif1a
Ncl
Fbxl22
Spout1
Endog
Cluh
Plekhn1
Noc2l
Klhl17
Adpgk
Yy1
Pura
Kdm4b
Elk4
Sumf1
Col11a2
Slc39a7
Rxrb
H2-Ke6
Ring1
Ddx59
Pibf1
Dis3
BC048403
Radil
Stam2
Nfkbil1
Ddx39b
Atp6v1g2
Gdf1
Cers1
Chrac1
Rmnd1
Armt1
C1qbp
Nfia
Nr1d2
Ahsa2
Sirt7
Mafg
Pycr1
B4galt3
Zmym6
Iba57
Hlcs
Yeats2
Tbcel
Tada1
Cd164
Nek7
Slc30a5
Map1lc3a
Nrsn1
Rps19
Pdf
Nip7
Cog8
Mycbp
Hsp90aa1
Atp5g3
Rbm39
Fxn
Sdf4
B3galt6
Mthfr
Clcn6
Pdik1l
Hexb
Ing5
Dtymk
Nup210
Hnrnpl
Zmiz2
Cep85l
Appbp2
Dync1h1
Zfp292
Thap11
Nutf2
Cenpt
Wipf2
Lrfn4
Rce1
Fam222a
Ppp1r3e
Bcl2l2
Srrm2
Rxylt1
Tdg
1190007I07Rik
Epn1
Rpl14
Cerk
Dctpp1
Zfp771
Eea1
Zdhhc3
Exosc7
Foxo3
Eri1
Susd6
Lsm6
Tnpo1
Serpina11
Zbtb2
Cep131
Sspn
Txndc12
Btf3l4
H2az2
Cyth2
Chmp6
Trim39
Rpl32
Pdpr
Tcstv3
Irf2bp1
4932438H23Rik
Nphp3
Il6st
Tmem198
Chpf
Tarsl2
Slc15a4
Arrdc2
Tpt1
H2bu2
Rnf187
Pi4kb
Fam122a
Desi2
Btbd3
Kdm3b
Nadk
Per2
Mios
Btaf1
Fgfbp3
Pdcd2
Deaf1
Sft2d3
Tmem80
Entpd4b
Entpd4
Ptbp1
Rab24
Prelid1
Mxd3
Cpe
Tgds
Gpr180
Mllt11
Cdc42se1
Sub1
Trp53rkb
P4hb
Arhgdia
Mfsd13a
Aff1
Seh1l
Grasp
Josd1
Gtpbp1
Mfsd14a
Tmem86a
Colgalt1
Tpst2
Ppp1ccb
Ppp1cc
Zfp628
Nat14
Gm36210
Tspan31
Marchf9
Cdk4
Zfp24
Srsf2
Mfsd11
Mettl23
Eif4g2
Tbc1d20
Elovl5
Wwp2
Sptan1
Arl4a
Ift46
Arcn1
Unc119
Srsf4
Me2
Cops7a
Klf11
Klhl21
Nae1
Car7
Srfbp1
Ttc3
Pigp
Kctd3
Tmem116
Erp29
Ccdc9
S1pr5
Keap1
Spcs3
Slc25a25
Naif1
Phf7
Bap1
Dpp7
Srd5a1
Nsun2
Chd1l
Icmt
Hes3
Hps1
Hnrnpab
St3gal5
Rpl35a
Lmln
Iqcg
Kmt2c
Morc2a
Dag1
Ubac1
Ing1
Cars2
Cln5
Tmem192
Mapk1
Ncor1
Smad2
Pigl
Sema7a
Knop1
Iqck
Ndst2
Golga5
Rasa1
Srsf9
Snap29
Pi4ka
Ncoa3
Birc6
Vapa
Zfp367
Habp4
Atf4
Rps19bp1
Sh2b3
Kansl2
Vac14
Pclo
Plekha1
Ptprs
Rb1cc1
Usp10
Rab5if
Pnpla8
Matr3
Ppp2r5e
Bicd2
Col6a6
Orai1
Mark2
Zfp653
Tas1r1
Nol9
Ifrd1
Phf20l1
Commd3
Bmi1
Atxn7l1
Rmi2
Srsf6
Riox1
Cmpk1
Nuak1
Snx8
Vps37b
Fubp3
Ttc14
Pcid2
Cul4a
Ptpn11
Fam219a
Dnaic1
Lpcat1
Ss18
Stau2
Eif4g1
Tut7
Cspp1
Cops5
Cep68
Sephs1
Tmem42
Taf11
Anks1
Tbc1d5
Tcf3
Ezh1
Hnrnpa3
Smurf2
Rnf103
Zc3h7a
Elf2
Znrd2
Fam89b
Ehbp1l1
Tspan3
Tmem106b
Cyld
Zmat3
Selenot
Gins1
Eif3a
Spice1
C330018D20Rik
Dennd1a
Ap5z1
Tmem11
Zfp710
Wipi2
Rab22a
Gm36028
Lrrc58
Pum1
Enpp4
Zbtb9
Rhob
Cirbp
Fam174c
Ncoa5
Fam13b
Nr2f6
Efhd2
Taf4b
Arhgap44
Mif4gd
Mrps7
Gga3
Pcdh17
Trp53rka
Pdpk1
Rab2a
Cep126
Exoc5
Ap5m1
Actg1
Dtnb
Gorasp2
Zfp523
Trmo
Pcmtd1
Atp6v1h
Nin
Rae1
Vamp3
Chn1
Casc3
Fryl
Tmem64
Dnaja1
Homer1
Orai2
Siva1
Idh2
Fam174a
Vars
D17H6S56E-5
Ssr1
Slc25a12
Map4k5
Atl1
Mapk6
Cog3
Dyrk3
Scmh1
Fdx1
Ankzf1
Kpna4
Mfsd5
Fam104a
D11Wsu47e
Tm9sf3
Ctsd
Snn
Rmi1
Hnrnpk
Wdr1
Ankib1
Krit1
Fbxl4
Ten1
Acox1
Slc35a1
Ksr1
Chka
Trpc4ap
Dync2h1
Dcun1d5
Amfr
Prkca
Sdhaf1
Syne4
Tarbp1
Ell3
Serinc4
Serf2
Hypk
Acot2
Heatr4
Atp2b1
Fbxo4
Ran
Zfand3
Zfp219
Tmem253
Mfap3l
Ythdc2
Rad9a
Ppp1ca
Tbc1d10c
L3hypdh
Jkamp
Prep
Pank2
P2rx7
Snx15
Sac3d1
Slc27a4
Bcl6
C2cd5
Dpy19l4
Sugp2
Armc6
Spata25
Ctsa
Neurl2
Trmt2a
Ranbp1
Cep63
Anapc13
Eif2b5
Herc1
Ivns1abp
Stard3nl
Gpr146
Rcc1
Tbpl1
Mapk8
Ilkap
Cbl
Ccdc153
Bloc1s4
Asf1a
Lmtk2
Sem1
Cdan1
Ambra1
Fam102a
Cbfa2t3
Ppp2r5d
Wwp1
Adrm1
Myo7a
Snrpf
Gnpnat1
Afg3l2
Stox2
Rpsa
Nrbp1
Lactb
Sgms1
Wdr81
Gzmm
Cdc34
Serpinb6a
Ripk1
Lin7c
Gcfc2
Egr1
Wdr82
Mfn1
Gabpa
Atp5j
Arl2
Kctd20
Golga4
Dnajb4
Fubp1
Ppig
Prmt3
Stip1
Carnmt1
Etv3
Dpp8
Ncbp2
0610012G03Rik
Ccne2
Rab6a
Cnbp
Prpf4b
Srrd
Hps4
Aatf
Dyrk1a
Arpc2
Rabggtb
Msh4
Rp9
Bbs9
Grik4
Tomt
Lamtor1
Anapc15
Hspa4
Kansl3
Fer1l5
Ndel1
Uqcr11
Mbd3
Uvrag
Med28
Bclaf1
Atp1a1
Ankrd54
Lcn2
Ptges2
Smarca4
Rbm6
Unc45a
Hddc3
Qsox2
Dym
Atad5
Crlf3
Epn2
Cacnb3
Mmaa
Dcaf10
Tmem248
Plcg1
Gng10
Pradc1
Cct7
Zscan29
Slitrk3
Smarcd1
Gdi2
Nepn
Gopc
Zfp668
Zfp646
Asic1
Clasp2
Ibtk
Trim27
Rps17
Cnga4
Fam160a2
Egln2
Snx13
Rps8
Zdhhc20
Copb1
Dld
Ppm1b
Atrn
Sec31a
Ubald2
Akirin1
Ptprn2
Ell
Cttnbp2nl
Suclg2
Rimbp3
Ube2l3
Foxo1
Lrp10
Mtmr1
Gga1
Zbtb44
Mlst8
Caskin1
Lysmd2
Dnah7b
Arrb1
Cry1
Unc5b
Lrrfip2
Rnf24
Lgalsl
Sesn1
Tmem250-ps
Rbm15b
Manf
Smad1
Tmem260
Gapvd1
Gabarap
Phf23
Dvl2
Pcyt2
Tex30
Xylt1
Acsl1
Ywhab
Large1
Adgrl3
Ddi2
Ccny
H4c14
H3c13
H2bc18
Pop7
Cnot2
Gigyf1
Sorbs1
Gbe1
Prelid3a
Phyhipl
Eml1
Camsap2
Taf10
Tpp1
Lbr
Snx22
Ppib
Tfdp1
Cep135
Slc6a6
Elf1
Wbp4
Epc1
Myo9b
Haus8
Zdhhc17
Nanos1
Cdk5r1
Foxg1
H3c15
H3c14
H2ac19
H2ac18
Ccdc88a
Vps36
Ckap2
Rbm17
Gpcpd1
Zfp207
5730455P16Rik
Hic2
Slc7a5
Sart1
Dennd6a
Igf1r
Trim26
Map2k4
Fam118a
Naf1
Klc1
Pgs1
Fem1b
Jak1
Hmgb1
Gars
Tmem201
Wdr41
Arih2
Plxnb2
Smim14
Lysmd3
Mon2
Kifbp
Tmem131l
Trim37
Sec62
Slc30a9
Micu2
Aldh5a1
Gpld1
Tle1
Ier5
Senp2
Ccdc58
Fam162a
Rsbn1l
Macir
Magi1
Dyrk1b
Fbl
Pitpna
Dffb
Cep104
Nrf1
Ip6k1
Ggnbp2
Myo19
Pigw
Rps6
Zranb2
Tmem219
Ubap2l
4933434E20Rik
Prr3
1700094D03Rik
Abcf1
Gnl1
Fnbp4
Kctd13
Arpp19
Hace1
Tmem125
AW549877
Gpx4
Flywch1
Gls
Xpo4
Ddx20
Fam53b
Lrp11
Yipf4
Tmem229b
1810013L24Rik
Fut8
Lrrc1
Slc25a51
Ptpn12
Lims1
Timm50
Btbd1
Dll3
Srsf3
Cacybp
Puf60
Phf13
Thap3
Cd47
Ift81
Scaf8
Btbd6
A430005L14Rik
Ttc9c
Hnrnpul2
Fnip1
Atr
1700065D16Rik
Map10
1700066M21Rik
Guf1
Acvr2a
Maml1
Tomm70a
Haus1
Atp5a1
Zfp644
Scand1
Cnbd2
Prrc2c
Wdr75
Arf1
Fbxl20
Cep78
Mettl24
Tmpo
Uba6
Slc25a16
Bpnt2
Coprs
Qk
Utp14b
Acsl3
Zbtb11
Rpl24
Eid1
Srebf2
Pskh1
Nrn1l
Arf3
Gtf2a2
Tprn
Ssna1
Anapc2
Tmem203
Ndor1
Washc5
Nsmce2
Mtmr9
Ift88
Rsph3b
Rbpj
Clcn4
Catspere2
Iars2
Bpnt1
Zfp654
Cggbp1
Fau
Tm7sf2
Gramd4
Mob1a
Mthfd2
Znhit2
Mrpl49
Sap30
Zbtb25
Zbtb1
Setd6
Smyd1
Krcc1
Top1
Snu13
Actn4
Rchy1
Celf1
Rnft1
Schip1
Rnaseh2b
Reck
Grhl1
Ythdf2
Senp8
Myo9a
Il6ra
Nfyc
Slc35d1
Uchl3
Mapre1
Zfp518b
Gpr62
Ldb1
Pdk1
Lifr
Dnajc1
Usp34
Tstd2
Ncbp1
Twsg1
Vdac3
Pofut2
Dazap2
Tmed10
Smg1
Srek1
Tlk2
Atp8a1
Msi2
Spats2l
Tmcc3
Tef
Ctdp1
Otud3
Ylpm1
Dipk1b
Trp53inp1
Tjp1
Ccni
2010109A12Rik
Kpna3
Mef2a
Lypla1
Rab3il1
Sesn3
Slc16a1
C1qtnf5
Rnf26
Kctd5
Flot2
Nt5c3
Dhrs13
Rps20
Xbp1
Irs2
Pfn2
Iffo2
Prr14
Fbrs
Tmem245
Gspt1
Smad3
Zdhhc6
Vti1a
Papss1
Frmd6
Btbd7
Mapt
Lonrf2
Snx18
Dnaja4
Zfp428
Yap1
Nudt3
Ephb1
Akap10
Lrpprc
Xpa
Yrdc
1110065P20Rik
Kpna1
Tent2
Raly
Stt3b
Adar
Cacfd1
Luzp1
Dgat1
Llgl1
Usp16
Rnf44
Exosc8
Alg5
Cdhr2
Ppp4r1
Csrnp2
Rab31
Crtc1
Akt3
Ptpdc1
Lrrc25
Ssbp4
Pex2
Pdcd6ip
Slf1
2210408I21Rik