ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1054887 | Embryonic brains
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◣ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Eipr1
Gm33887
Pbx3
Dhdds
Mindy4
Nufip2
Zfp800
Barhl1
Lmo1
Fezf2
Hopx
Med25
Fuz
Greb1
Nhsl1
Dhx32
Zfp608
Schip1
Nuak2
Pgap6
Mrpl28
Cldn34d
Nkx2-6
Pcyt1b
Efnb2
Txndc11
Gm3985
Fzd8
Wnt1
Ddn
Foxp4
Kpna1
Tanc1
Crtam
Eif5a2
Arid1b
Stk11ip
Rspry1
Psme3ip1
Ptn
Pou2f1
Gtf2a1l
Pik3r1
Car5a
Gli2
Emx2
Zfhx4
Fasn
Lrrn2
Jag1
Ccn1
Notch1
Abca4
Tnrc18
Fam181b
Cpb2
Enc1
Yeats4
Treml4
Myt1l
Rabl3
Gtf2e1
1110051M20Rik
Trp63
Tle3
Tex12
Il18
Bco2
Adgrv1
Cntnap2
Mov10l1
Mlc1
Dhrs3
C1qtnf1
Msi1
Cfap20
Lxn
Eif1ad
Banf1
Mro
Fgfr2
Zfp703
H4f16
H2aj
Nr2e1
Nrxn3
Smim38
Phf23
Gabarap
Dvl2
Dtna
Cpsf6
Pmpcb
Erbb4
Dmrt3
Zfp623
Surf6
Rpl7a
Med22
Tex19.2
Nog
Capn5
Slc45a3
Kazald1
Topbp1
Fgd4
Il12b
Vldlr
Sox2
Prdm12
Sv2b
Ets1
Cpt1a
Gas1
Fam53b
Tmem108
5730409E04Rik
Lhx8
Banp
Ptbp1
Adtrp
Cep170
Fam122a
Mmut
Cenpq
Polr3k
Zfp9
Scube1
Gmeb1
Taf12
Sh3bp4
Astn2
Insm1
Sybu
Zscan22
Nell1
Zc3hav1l
Vax1
Lipg
Lhx2
Tbc1d22a
Tmprss11e
Myo10
Lingo2
Epc1
Pknox1
Samd4
Wdr48
Slit1
Dock9
Sall3
Clasp1
Ska2
Prr11
Abhd6
Khsrp
Slc25a41
Polr2e
Mex3a
Rab25
Npas1
Zfp428
Zmym4
Pcdh8
Celf2
Cilp
Kif21a
Med30
A2m
Nfkbiz
Mrpl58
Igsf3
Ttc41
Hsp90b1
Ptger2
Tm9sf4
Lix1
Slc22a18
Cdkn1c
Sox21
Lmo3
Msra
Epb41l5
Mafb
Ndufc2
Ankrd36
Epha4
Nrf1
Fbxw4
Cpa5
Grik3
Ndufa4l2
Stac3
Atp2b2
Hes5
Pank4
Gdi2
Lemd1
Olfr806
Gtf2ird1
Pkdcc
Nudt2
Kif24
Tle4
Myd88
Acaa1a
Pde2a
Sap30bp
Recql5
Hsbp1
Snw1
Tal2
Hsd17b3
Serpine2
Pcnx3
Map3k11
Dcaf17
Mettl8
Gpc6
E030030I06Rik
Zc3h12c
Tprgl
Megf6
Fxn
Senp7
Psat1
Cadm2
Ascl1
Krr1
Rhobtb2
Foxg1
Adnp
Glra1
Nemf
Ccdc177
Kdm2b
Elavl4
Hpgd
Ermn
Frzb
Fsd1l
Camk2a
Duxbl3
Duxbl2
Duxbl1
Mecp2
Plxnc1
Epha8
Clu
Cltb
Rnh1
Bmpr1b
Spata13
Xxylt1
Ncdn
AU040320
Unc5a
Rtraf
Poc5
Ednrb
Edar
Ankrd40
Parp11
Dtd2
Mysm1
Kcnt2
Alg8
Kmt5c
Zfp180
Zfp219
Tmem253
Hepacam
Trib1
Ctbp2
Fsbp
Tnfrsf19
Tex26
Adcyap1r1
Triobp
Rffl
Tmem132e
Sec61b
Alg2
Trcg1
Med6
Tcf7l2
Spata20
Epn3
Nars2
Cwc22
Zfp574
Grik5
Dipk1c
Virma
Ctdsp1
Slc1a5
Stoml2
Pigo
Skor1
Drosha
6030458C11Rik
Ccnd2
Zfp729a
Chek2
Mdm1
Wdr89
Naa50
Atp6v1a
Hexb
Rnf130
Mzf1
Calr3
1700030K09Rik
Asf1b
Cpe
Thsd7a
N4bp2l2
Pds5b
Ccdc33
Stk10
Efcab9
Ppia
Asxl3
Psmd11
Serpinb1b
Rgs3
Trim35
Sufu
Actr1a
Ccdc12
Tmem107
Nbeal2
Sorbs2
Atg12
Ap3s1
Gm5165
Pou3f4
Klhdc8b
Ccdc71
Prmt1
Snrpc
Prdm13
Tet3
Gsg1l
Chmp4b
Rpl13a
Cep120
Gse1
Abca3
Abca17
Rps11
Flt3l
Kitl
Pipox
Polg
Ccl1
Arfip1
Lrrc42
Hspb11
Gpr142
Btbd17
Prelp
Optc
Mrpl23
Gbx2
Sgms1
Mtus1
Hivep3
Myt1
Clcn3
Ppic
Limch1
Rpl35a
Lmln
Iqcg
Rtn4
Zfp386
B3gnt2
Helt
Mep1a
Dhrs7b
Zhx2
H2bc4
H2ac6
Rpf1
Bdnf
Slc38a9
Ddx4
Cntn6
Naa80
Ifrd2
Hyal3
Lsmem2
Brms1l
Akna
Arl5c
Tle6
Il31ra
Trim11
Sft2d1
Polr3b
Tacc1
Riok2
Klhl18
Kif9
Pdgfra
Krtap21-1
Krtap6-2
Arih1
Smbd1
Muc20
Brwd3
Sost
Vps28
Slc39a4
Ankrd11
Arvcf
Gulp1
Rax
Lpar3
Creb5
Ush2a
Ago2
Zswim1
Spata25
Neurl2
Ctsa
Tmem47
Tysnd1
Bahcc1
Ajuba
Dyrk3
Ddr1
Sh3pxd2a
Capn8
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Btbd8
Rcn3
Ncaph
Itpripl1
Shb
Dcaf11
Sec13
Slamf8
Tigd2
Lamc2
Otx2
Slc35b1
Numa1
Prrx1
Cisd3
Vta1
Pld1
Kiss1
Rgs13
Stk35
Gng2
1700113H08Rik
Sox8
Cds2
Nrde2
Mdga1
Ndst1
Vit
Slc4a5
Fezf1
Tspan9
Irf2bpl
Ghrh
Pax7
Ssx2ip
Septin1
Jph2
Tbc1d10b
Mylpf
Rps24
Bfsp2
Hexim1
Psd3
Lrr1
Rps29
Grm4
Pax3
Klhl25
Rfx4
Il3ra
Ing2
Dusp6
Arhgef10l
Igfbpl1
Prr15
4833420G17Rik
Knl1
Gm973
Cma2
Ptpn6
Grcc10
Gng13
Rpusd1
Chtf18
Mslnl
Ankrd23
Prlhr
Rab8b
Dennd2a
Six3
Ero1b
Igfbp2
Tmx1
Pak1ip1
Cox7a2l
Trappc9
Krt10
Ankrd29
Ear10
Shbg
Sat2
Clasp2
Znrf3
Tspan17
Fam118a
Med27
Rpl15
Nkiras1
Sfxn1
Zbtb38
Ric8b
Camk1g
Plpp3
Ubc
Tom1l1
Arhgap15
Sall4
Eef1a1
Marcks
Mpeg1
Gtf2a1
Csdc2
Polr3h
Rere
Fzd10
Oaz2
Slitrk6
Mtf2
Oma1
Grhpr
Gba
Plcd1
Cd209a
Tcl1b4
Cdh17
Pip4p2
Tmem67
Rbm12b2
Dusp1
Thyn1
Acad8
Marchf9
Cdk4
Itfg2
Cyp27b1
Ostc
Nup205
Prmt3
Yipf1
Dio1
Myo1h
Lrp8
Foxn4
Pappa
Imp4
Ccdc115
Mid1
Inip
Mrps28
Sulf1
Pml
Chpf2
Abcf2
Atp5mpl
Tdrd9
Gm7932
Mapkapk2
Thoc3
Fam234a
Luc7l
Hs6st1
Ptpn21
Zc3h14
0610030E20Rik
Usp39
Urm1
Hnrnph1
Hacd3
Ttyh1
Trim2
Zfp622
Txnl4b
Dhx38
Kdm4a
Cacng4
Zkscan14
Zkscan5
Zfp960
Fam71e2
Med16
Cox8c
Srek1
Nupl1
Bcar3
Klhl9
Tcf7l1
Cyfip2
Znrd1as
Znrd1
Prcc
Ppp1r11
Cuedc1
Kif2c
Adamtsl1
Igf2bp3
6720489N17Rik
Borcs6
Mc4r
Tpm3
Twistnb
Tcf12
Rab11fip5
Prickle2
Ascc3
Tmem218
Itm2b
Myo6
Cntln
Mcm3
Cdk12
Med1
Esrrb
Podxl2
Tmem135
Nedd4
Men1
Map4k2
Fzd4
Maz
Prrt2
Dcdc5
Sall2
Camsap1
Ext1
Emc7
Slc39a9
Erh
Ccpg1os
Ccpg1
Smim20
Mpzl1
Muc1
Lrrtm2
Osbpl1a
Havcr1
Otud1
Rapgef4
Ankrd39
Sema4c
Ear1
Kat6b
Spop
Wwox
Arl4d
H4c17
Rpp25
Smpd4
Itgbl1
Med23
Fnip2
a
4930583I09Rik
Ell2
Zfp317
Rbm15
Bfsp1
Lypd4
Dmrtc2
BC107364
Rab7
Tcf4
Pofut1
Plagl2
Phf5a
Aco2
Cdk1
Slc18a1
Atp6v1b2
Anp32e
Cwc25
1700001P01Rik
Dapp1
Nes
Txndc16
Gpr137c
Gjd2
Ppp3r2
Psma1
Rcan1
Uchl1
Fat4
Pim2
Nifk
Ints12
Gstcd
Setd4
Cbr1
Prepl
Camkmt
Zfp628
Nat14
Peak1
Hmg20a
Ssc5d
Ptp4a3
Gsx2
Wdr95
2410004B18Rik
Ccdc190
Colec10
Rps8
Dll4
Stmnd1
Efcab5
Rhod
Hunk
Cyth1
Ndufb4
Mob3a
Izumo4
Rnase4
Ang
Smpdl3a
Fabp7
Syncrip
Ufm1
Kif11
Sox5
Ttll9
Etv5
Pprc1
Tecr
Ppan
Angptl6
Metap1d
Pou3f2
Flcn
Ube2b
Cdkl3
Tmem167b
Taf13
Ncald
Igsf10
Wscd1
Col5a2
Cryzl2
Itgb8
Jarid2
Tgif1
Asrgl1
Mycl
Zfp609
Ppp1r9a
Scg2
Abcd2
Tomm20
Brms1
Zfp503
Mitf
B4gat1
Ubl7
Irx3
Zcchc14
Utp3
Lmo2
Col6a6
Wdr33
Nfam1
Sec22a
Sfswap
Seh1l
Kcng3
Gm51425
Aff4
Atxn1
Stap2
Mpnd
Gas2l3
Map4
Tada2a
Cry1
Itgb5
Noct
Mettl3
Pcdhgc4
Pcdhgc3
Pcdhgc5
Npcd
Cbx6
Slc25a22
Rplp2
Pidd1
Chka
Zfand6
Nrcam
Gucy1b2
Fgf7
Ccdc194
Spsb4
Os9
Hspa1b
Gpcpd1
Zbtb4
Phactr1
Slc35g3
Polr2a
Lrrc9
Fam181a
Fgd3
Cd2
Gm6712
Tm2d2
Adam9
Kctd14
Mvd
Kctd13
Tmem219
Srsf11
Lrrc40
Lekr1
Mterf1a
Ubxn6
Hdgfl2
Dnajc16
Casp9
Aicda
Jph1
Itga2
Mettl15
Kif18a
Tmem79
Cdiptos
Cdipt
Plekhg1
Kcnmb2
Gpbp1
Glmp
Mlh3
Acyp1
Ifngr1
Ahr
Zc2hc1c
Mas1
Rnaseh2b
Prss23
Rasgrp1
Rps7
Dhx8
Tmc7
Tmc5
Fam149a
Stox2
Lfng
Lpp
Laptm4a
Trak1
Sc5d
Vim
Rbm20
Rxrg
Nbdy
Atp1b4
Ext2
Mbnl2
Map2k6
Zc3hc1
Hnrnpul1
Asb4
Dct
Coq8a
4930402H24Rik
Phc2
Rest
Neurog2
Crb2
Cenpu
St7
Kifc3
Nat8
Riok3
Fbxl22
Ints9
Hmbox1
Zfp65
Col12a1
Nlrp10
Eif3f
N4bp2
Cpa4
Zfp91
Lpxn
Bmp7
Gja1
Srp68
Galr2
Mideas
Ubp1
Psmc1
Riiad1
S1pr1
Sirt4
Zcchc7
Usp1
Plec
Ankhd1
Parp10
Grina
LOC100041593
LOC100041504
Gm13304
Gm10591
Ccl21d
Ccl21c
Pex12
Eif3d
Clstn1
Lrfn5
Krt40
Ankk1
Fktn
Erich6b
Krtap3-3
Krtap3-2
Mkrn3
Slfn14
Snrpd3
Gucd1
Ntn1
Kat7
Enpp3
Amt
Rnf207
Nicn1
Rpl22
Tcta
Rhoa
E2f2
Idnk
Myh9
Amn1
Dab2ip
Ctxn1
Tgfbr3l
Snapc2
Nup85
Ywhah
Elmo2
Phc1
Adgra1
Arsg
Lpar4
Dcn
Gdf10
Neurog1
Thada
Rufy3
Prkacb
Upk2
Fmn2
Cyp2j6
Smim8
Rpl32
Bcl9
Lrrtm3
Grap2
Pcdh10
Lancl3
Ptrhd1
Cenpo
Lag3
Gapdh
BC004004
Agbl5
Gna13
Ybx1
Zfc3h1
Thap2
Cdkn1b
Id3
Phf12