ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX429085 | Retina
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◣ SRX429085: Retina

◢ Otx2: STRING

Polr3f
Dzank1
Zfp654
Cggbp1
Hmgn1
Neu3
Pitpnm2
Fam78b
Gpr152
Cabp4
Coro1b
Ing2
Rgs9
Gngt2
Abi3
Ndufv1
Bbs5
Crx
Thap4
Me1
Rgs20
Mat2a
Hk2
Rbp3
Crxos
Pink1
Wdr17
Slc22a30
Harbi1
Atg13
Susd3
Fam120a
Rhot1
Fmn1
Kcnv2
Sv2b
Pklr
Napa
Ankrd33
Trim36
Atp5k
Lurap1l
Akna
Zranb1
Guca1a
Plec
Eipr1
Samd7
Dusp16
Rho
Tfpi2
Sag
Hspa1b
Hspa1l
Hspa1a
Slc6a6
Ccdc136
Aldh3a2
Cplx2
Dnmbp
Gzmm
Pla2r1
Sema7a
Tma7
Ccdc51
Atrip
Otub1
Med24
Cox8a
Tescl
Rgs9bp
Ankrd27
Cipc
Gramd1b
Camk1d
Apbb1
Zfp668
Zfp646
Vldlr
Pou2f1
Epb41
Cyth2
Kcnj14
Pex5l
Crb2
Hcn1
Zfc3h1
Thap2
Whrn
Lyrm9
Sde2
Plekhb1
Mybphl
Cdhr1
2610528A11Rik
Ttc9c
Hnrnpul2
Slc38a3
Uhrf1bp1l
Mef2d
Rorb
Mreg
Wdr89
Gm5460
Catsper4
Rgl3
Igsf9
Mrpl19
Klhl36
Wdr78
Mier1
Doc2b
Acbd6
Unc119
Rp1
Ccdc63
Uqcc3
Lbhd1
Ints5
1810009A15Rik
Cplx4
Sntg2
Rp1l1
4930578I06Rik
Mrps23
Gnb1
Zfp787
Mgat1
Ube2v1
Dgke
Prnd
H4c3
H1f6
Tsg101
Glt28d2
Zfp960
Lpcat1
Ap1b1
Fam53b
Pcbp4
Abhd14b
Gpr62
Slc25a22
Cend1
Gnb3
Syne3
Rrp1b
Stk35
Kdm5b
Mgat4e
Greb1
Coro2b
Rpap2
Glmn
Mbnl1
Zdhhc7
Rps17
Tlcd3b
4930451I11Rik
Angptl7
E2f3
Ric1
B3gat3
Rom1
Eml3
A430005L14Rik
Dhrs3
Pde4b
Grk1
Atp4b
H1f8
Fam149a
Zmynd8
Pitpnm3
Ptp4a3
Dnajc5
Rgr
Lrit1
Adipor1
Pcnx3
Map3k11
Gnat1
C2cd2l
Dpagt1
Tkfc
Ddb1
Mpp4
Daam1
Pdc
Chrm5
Hfm1
Arl13b
Thoc5
Impdh1
Katna1
Stk40
Ccdc177
Fyco1
Angptl1
Slc24a1
Ints14
Ddx6
Tmem108
Zbtb7b
Togaram2
Prcc
Lsm14a
Fabp12
Sec14l1
Ppef2
Gng13
Rpusd1
Chtf18
Tnfsf13
Tnfsfm13
Tnfsf12
BC051019
Ascl3
Add3
Borcs7
Add2
Cdk19
Slc22a28
Kcnb1
Pde8a
Atp13a3
Bst1
Rdh12
Usp2
Plch2
Mapk6
Gadd45a
Raph1
Gm39115
Rffl
Celf2
Dnaja4
Msra
Shroom3
Vwa5b2
Syt1
Pcare
Snrnp70
Kcna7
Eif2ak1
Isoc2a
Aktip
Zfpm1
Isoc2b
Atg4c
Ntng2
Spata1
Gng5
Pgs1
Zcchc8
Slc22a29
1700001K19Rik
Ppm1j
Tafa3
Xkr7
Tspan10
Oxld1
Ccdc137
Smim13
Arl6
Kpna1
Podxl
Chpf2
Abcf2
Agtpbp1
Sec22b
H2bc4
H2ac6
Dpysl3
Scn4a
Katnal2
Pdzph1
Bmf
Gnb2
Pcmtd2
Cacna2d4
Ahr
Abcg4
Itsn2
Fsbp
Kras
Pla2g5
1600014C23Rik
Pbx3
Akr1e1
Slc25a25
Naif1
Madd
Tube1
Fam229b
Rpl10a
Cpt1a
Pde6a
Slc26a2
Mtmr6
Chst12
Ncbp2
0610012G03Rik
Casz1
Ctxn1
Timm44
Cfap97
Cds1
Cited2
Akap1
Brf1
Prr14
Fbrs
Gtf2ird1
Ubap1l
Prdm1
Kif15
1110059G10Rik
Gsc2
Ess2
Slc25a1
Rps6
Kcne2
Mak
Smim11
Acer2
Impg1
Rab33b
Ptgds
Paxx
Kif21b
Pmm1
Nr2e3
Tpd52
Ppp2r1a
Wdtc1
Ppp1r3c
Trim2
Got2
Fam107b
Ccnq
Prcd
Cygb
Xiap
Plekha2
Eif3e
Mfap3
Fam114a2
Surf6
Rpl7a
Med22
Prxl2b
Trafd1
Slc31a2
Borcs5
Pih1d1
Slc17a7
Atxn2
Zbtb18
Snta1
Slc16a5
Reep4
Hr
Ptpn6
Grcc10
Sirt4
Pla2g1b
Utp3
Rufy3
Thyn1
Acad8
Rnf207
Rpl22
Kdm4c
Nos3
Gngt1
Gng11
Txndc11
Clca1
Rd3
Naa50
Atp6v1a
Mllt3
Abca4
Zfp97
Tdrd7
Paqr4
Kremen2
Tent4b
Mlec
Diaph3
Gm51425
Acads
Bicdl1
Unc119b
Slc26a1
Idua
Dgkq
Neurod1
Prcp
Ddias
Rlbp1
Fanci
Nrl
Cpne6
Stx3
Plekhf2
Psmg1
Tmem237
Hspa8
Tex261
Prph2
Ankrd53
Rangrf
Scrn2
Slc25a35
Slc35b1
Slc19a1
Gm38396
Gca
Ifih1
Rxra
Tnfaip3
Prom1
Ager
Rnf5
Agpat1
Rtn4rl2
Anp32e
Zfand3
Ndufa8
Morn5
Erc1
Memo1
Wdr31
Xrcc6
Desi1
Cldn34d
Olfr1416
Ndufa10
Pias3
Acsl1
Kif2a
Tex37
Tulp1
Eepd1
Pgk1
Rspry1
Psme3ip1
Gnb5
Cngb1
Tepp
Fhod3
Clic6
Fsd1l
Ebpl
Snx10
Uhmk1
Mapre3
Gm5165
Josd1
Tomm22
Nipal1
Cnga1
Sfxn2
Arl3
Pde8b
C1qa
Gpm6b
Spg7
Ccdc24
Smim14
Med27
Fgd4
Cnot6l
Rpgrip1
Hnrnpc
Slco4a1
Uckl1
Lrit2
Nono
Zmym3
Gcc1
Fscn3
Arf5
Arhgap10
Ddhd2
Aipl1
Peli3
Hnrnpl
Cfap70
Gls
Gulo
Hes3
Pprc1
Dad1
Abhd4
Tmem218
Cdk5r2
Serf2
Serinc4
Hypk
Tarsl2
Agpat5
Tet3
Phf14
Ndufa4
Suco
Dixdc1
2310030G06Rik
Dact3
Vmn2r102
R3hcc1l
Trim17
H3f4
H2bu2
H2aw
Nhlrc2
Dclre1a
Ssbp4
Isyna1
Lpgat1
Exog
Smchd1
Pitpnm1
Cdk2ap2
Mrps14
Hes5
Rrp15
Pank4
Nup85
Ccdc126
Slc16a1
Ahctf1
Cspg5
Zfp213
Wasf3
Atp1a3
Mef2c
Pde6b
Kpna2
Rcvrn
Ift27
Nphp4
Sh2d7
Decr2
Zfp955a
Kntc1
Scap
Dohh
Smim24
Gm48552
Npc1
Ppcdc
Zfp955b
Rev3l
Ndst1
Impg2
Bicral
Pfkfb2
Yod1
Smim20
Dhx32
Fank1
Amph
Inava
Khsrp
Slc25a41
N4bp2l2
Pds5b
Ptrhd1
Cenpo
Sumo3
Mro
Pygm
Fxn
Hif1a
Urm1
Ascc2
Elmod2
Pip4k2c
Prkca
Atad5
Crlf3
Map4k1
Eif3k
Epas1
H4f16
H2aj
Cfap20
Vamp2
Sp6
Adcy1
Phc2
Card19
Lclat1
Smad2
Gtf2e2
Smim18
Slc4a7
Rabl3
Gtf2e1
Prmt1
Rab43
Ctnnbip1
Gnat2
Gm12500
Ampd2
Ift172
Gckr
Fndc4
Hs6st1
Top2b
Fam178b
Nhp2
Neil2
Sebox
Vtn
Sarm1
Ablim1
Gucy2f
Zfp444
Mrpl45
Shb
Tmem229b
Gamt
Dazap1
Marchf9
Cdk4
Cyp27b1
Zfyve19
Dnajc17
Zfp36l2
Trak1
Fntb
Chmp5
Bag1
Ttyh3
Zfp574
Grik5
Osbpl1a
Tbc1d32
Chek2
Tob2
Acsl6
Zfyve27
Vps18
Prkn
Pacrg
Ndufs3
Kbtbd4
Usp38
Ptpmt1
Cpeb3
Marchf5
Antxr2
Tmem126b
Ybx3
Rps27a
Clhc1
Wdr59
Pskh1
Nrn1l
Tnrc6b
Trip10
Gpr108
Crocc
Smim8
Gucy2e
Dock9
Ufl1
Vinac1
Ttl
Commd1
Cct4
Asrgl1
Acadm
Tmem214
Inka2
C1ql3
Virma
Fbxl19
Myd88
Acaa1a
Heatr1
Slc35e3
Sgk1
Ppp1r10
Mrps18b
Atat1
Plcd3
Acbd4
Npat
Atm
Tcea3
Cited4
Zfyve28
Cfap99
Slc25a44
Prpf19
Homer3
Mrps33
Olfr1344
Cnpy3
Siva1
Guca1b
Btc
Ak3
Cntln
Eef2kmt
Chsy1
Atg4b
Lrrc1
Elac1
Cstf3
Maz
Prrt2
Arhgef18
Msi1
Fbxo9
Cilk1
Fxyd4
Sh2d6
Alkbh5
Phf5a
Aco2
Mtss1
Pacsin1
Rdh8
Col5a3
Ush2a
Prpf8
Sec22a
Gtf2f2
Man2a2
Pop7
Magi2
Gins4
Guk1
Gjc2
C1qtnf4
Eno1
Dctn6
Mboat4
Stk17b
Atf3
Dennd6a
Riox2
Kyat1
Prrc2b
Pofut1
Plagl2
Sap30bp
Recql5
Eya3
Pithd1
Alpl
Pimreg
Heg1
Bach2
Ptgr2
Arl10
Msh3
Dhfr
Nop16
Higd2a
Zfp708
Hnrnpf
Slmap
Cln5
Tal2
Cst3
Epb41l2
Phyhd1
Herc3
Slc17a3
Trib1
Ppp3r1
R3hdm4
Kiss1r
Med16
Tex264
Dalrd3
Ndufaf3
Impdh2
Pxn
Ubxn11
Cd52
Zfand6
Zfp148
Pex2
Vat1
Rnd2
Mcf2l
Acaa2
Golgb1
Smim31
Car5a
Banp
Slc12a5
Pdzd2
Dpp9
Eif3a
Leap2
Uqcrq
Gdf9
Adamtsl5
Plk5
Rnf19a
Frs2
Elmo2
Ankhd1
Ptpn23
Mest
Cln3
Apobr
Elovl2
Plpp2
Zfp623
Nifk
D16Ertd472e
Xxylt1
Pik3ca
Hsbp1
Tgm7
Ddx1
Daxx
Slc2a1
Zbtb22
Tapbp
Cirbp
Ppp1r18
Fam174c
Nrm
Osbp2
Pdcl
Otp
Mmp17
Mrpl11
Cdk13
Znhit1
Plod3
Tub
Gstp2
Gstp1
Tap2
Psmb8
Dkkl1
Tap1
Tead2
Tbc1d7
Bbs7
Btg1c
Zfand5
Erv3
Opn1mw
Tuba1a
H3c3
H2bc3
H1f2
Usp6nl
Optn
Ranbp2
Zfp317
Ppip5k1
Ckmt1
Zfp385b
Fcamr
Tmem230
Pcna
Parp10
Grina
Lrp2
Hadhb
Hadha
Rad54l
3300002I08Rik
Rcor3
Rtn4
Polk
Cert1
Lima1
Chchd3
Slc35e1
Rabgef1
Zscan22
Dnal4
Acox3
Trmt44
Vbp1
Cyp26c1
Sp2
Nufip1
Gpalpp1
Tigar
Ctbp2
Ccdc38
Gm525
Lactbl1
Klhl8
Slc1a7
Ap1s1
Wnt8a
Ip6k2
Kcnh6
Zfp78
Commd10
Slc7a15
Rtn1
Rsl1d1
Cdc42ep3
Bfar
Reep6
Pcsk4
Jak1
Cdk8
Tmx1
Cox7a2l
Rbfox2
Scarb1
Slc35c2
E030030I06Rik
Zcwpw1
Ppp1r35
Mepce
Ttc41
Hsp90b1
Gse1
Tcn2
Abhd14a
Cplx3
Gm6712
Mylip
Cltb
Med6
Zfp655
Zdhhc6
Vti1a
Papolb
Dusp14
Rpl7
Rdh10
Kcnj1
Prdm10
Gm7244
Rbm25
Zbtb5
Polr1e
Arid3b
Hook1
Gba
Ankrd12
Vps37b
Dstyk
Clasp2
Rfxap
Lpin2
Sec61b
Alg2
Gfpt1
Ntsr1
Mad2l1
Rnase12
Olfr750
Mrps28
Zfp622
Emc7
AU022252
P3h1
4930564D02Rik
Vps37a
Cnot7
Tmem269
Mrps10
Itgax
Ccdc171
Vps28
Slc39a4
Clic3
Tbc1d14
Rabif
Prdm4
Pde6d
Cops7b
Faim
B3gat1
Bod1
Zdhhc17
Nudt17
Osbpl2
Nfkbil1
Atp6v1g2
Ddx39b
Senp8
Myo9a
Tmsb4x
Clcn5
Vps37c
Vax2
Men1