ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9450557 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◣ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Denr
Txndc11
Qrich1
Qars
Styxl1
Mdh2
Wdr77
Atp5pb
Cdk12
Med1
Kmt2a
Scamp5
Rbm39
Eif4a3
Card14
Car5a
Banp
Akap11
Slc26a8
Mapk14
Ireb2
Hspa4
Mcts2
Dnajb4
Fubp1
Psmd5
Cutal
Ube2d3
Rraga
Ercc6l2
Arf3
Naa35
Zzz3
Supt5
Micos10
Golm2
Nsun3
Ankfy1
Edrf1
Herc1
Rps19
Zbtb2
Stxbp4
Cox11
Puf60
Tigd2
Marchf7
Btbd10
Zkscan2
Zfp91
Lpxn
Lsm14a
Ddhd2
Eif5a2
Ssbp4
Lrrc25
Pgap6
Mrpl28
Zcchc14
Spsb3
Nubp2
Igfals
Nme3
Mrps34
Eme2
Smarca5
Creld2
Alg12
Tipin
Pfn1
Slc25a11
Rnf167
Eno3
Gp1ba
Dgke
Uhrf2
Tspan17
Rabl3
Gtf2e1
Smim10l1
Myef2
Nudt1
Surf6
Rpl7a
Med22
Surf2
Surf1
Nptn
Coq9
Ciapin1
Gm7762
Rtn4rl1
Dph1
Fam76a
Spdl1
Get4
Ttc14
Srek1
Ss18l2
Nktr
Mthfd2
Mob1a
Map3k7
Pou2f1
Pfkfb2
Yod1
Adnp
Tmem134
Aip
Zfp623
Rnf4
Kazald1
Tubgcp5
Tmco1
Ell2
Srsf10
D1Pas1
Atf7
Trappc2
Ofd1
Calr3
1700030K09Rik
Mfsd8
Rcor2
Polr3k
Lamp1
Rab6a
Tmem88
Naa38
Cyb5d1
Tmem47
Ube2s
Hes3
Nono
Zmym3
Fam135a
Eif5
Rnpc3
E030030I06Rik
Rbmxl1
Slc10a7
Il25
Cmtm5
Efs
Eipr1
Dhrs3
Cul5
Tmem200b
Drg1
Vdac3
Wdr27
1600012H06Rik
Trim24
Upf3a
Rps7
Ccdc30
Rab33b
Rps3a1
Thap7
Rbm26
Cstf3
Pura
Prdx1
Glcci1
Tpr
Odr4
Mbd6
Ddit3
Npepps
Stk11ip
Rspry1
Psme3ip1
Tcf25
Eif1ad
Banf1
Ube2e3
Polr2e
Gtf2ird1
Atf2
Stag3
Gpc2
Gal3st4
Pcmtd1
Aurkc
Abhd18
1700034I23Rik
Cldn34d
Tardbp
Cdc5l
Ccdc88b
Rims3
Zfp566
Zfp260
Nfkbiz
Adgrv1
Epb41l5
Huwe1
Tmem209
Ssmem1
Dalrd3
Wdr6
Pigw
Myo19
Ggnbp2
Sf3a2
Plekhj1
Amh
Usp53
Rai14
Slc25a4
Hnrnpr
Tlk2
Nupl1
Kcnk6
Yif1b
2200002D01Rik
Cd37
Cdv3
Arfip1
Lrrc36
Kctd19
Tcf3
Stk38l
Sfi1
Eif4enif1
Tprgl
Megf6
Rps28
Dcaf17
Mettl8
Ahnak2
Clba1
Dynll1
Kin
Atp5c1
Hells
Asph
Mbtps1
Hsdl1
Dnaaf1
Zdhhc5
Zbtb40
Micu2
Ncoa4
Haspin
Dync1h1
Pradc1
Cct7
Tspyl1
Mrps14
Zfp960
Topors
Smim27
Chuk
Arl2bp
Sacs
Ptpn4
Dzip3
Cip2a
Slc1a5
Relch
Pign
Rpl35a
Lmln
Iqcg
Chpf2
Abcf2
Khsrp
Slc25a41
Septin7
Arl10
4833439L19Rik
Rpl10a
Hip1
Pum3
Gamt
Dazap1
Caprin2
Lsm8
Nhp2
Etfbkmt
Septin8
Grhpr
Asxl1
Ksr2
Shroom3
Atp5mpl
Tdrd9
Rictor
Rpl26
Supt16
Pibf1
Dis3
Homer3
Luc7l2
Ubxn2a
Myd88
Acaa1a
Amotl2
Larp4b
Ssbp1
Cpsf6
Adprh
Npc1
Map1b
Npm1
Chmp2a
Ube2m
Mrps28
Nop14
Grk4
Siva1
Prmt1
Slc29a1
Mymx
Uspl1
Tcam1
Smarcd2
Srsf11
Lrrc40
Lemd1
Zfand2a
Fzd6
Sap18b
Sap18
Cacna2d4
Lrtm2
Zmym4
Etfa
Drosha
6030458C11Rik
Mob1b
Gtf2a1
Vinac1
Ttl
Tysnd1
Psmb2
Polr2b
Noa1
Bbs1
Rbks
Babam2
Rfesd
Rpl12
Lrsam1
Virma
Armc8
Dbr1
Nsd3
Letm2
Capn1
Utp3
Cd300e
Prr5
Snx5
Mgme1
Cox6b2
Dars
Unc5a
Cnot3
Dhx32
Ptrhd1
Cenpo
Rmnd5b
4930447C04Rik
Idh1
Pikfyve
Donson
Ska3
Mrpl57
Tnip2
Glce
Spata20
Epn3
Zfand3
R3hdm4
Kiss1r
Med16
Cep85
Slc5a6
Cad
Atraid
Exo5
Papolb
Kif2a
Trp53bp2
Gm13212
Xxylt1
Zfp574
Grik5
Dlc1
Dennd2a
Ankhd1
Zfp53
Mrtfb
Prss48
Foxp2
Ptgr2
Atad1
Gdi2
Pcnt
2610028H24Rik
Zscan22
Ryr2
Tomm20
Snrpd3
Gucd1
Mrpl40
Hira
Accsl
Cul3
Pih1d1
Aldh16a1
Slc17a7
Zbtb6
Rc3h2
Fam219a
Dnaic1
Ska2
Prr11
Kif5a
Dctn2
Ppm1g
Zfp78
Seh1l
Dnajc27
Tefm
Tas1r1
Nol9
Sec23ip
Mcmbp
Grb2
Exosc10
Sap30bp
Recql5
Cs
Sspn
Smdt1
Pheta2
Naga
Ndufa6
Ncapg2
Msh2
Yy1
Bub1
Chek2
Cep170b
Tmem130
Trrap
Pbld2
Hnrnph3
Zfp219
Tmem253
Ehd1
Csnk1g3
Etfrf1
Casc1
Brf1
Tmx3
Zfp180
Lima1
Leap2
Uqcrq
Gdf9
Tmem183a
Tpmt
Kdm1b
Ubr3
Trim59
Krr1
Dut
Dusp1
Bcat1
Ptges3
Gdf5
Cep250
Ptp4a2
Zfp622
Sec63
Nuak2
Flcn
Ppard
Naa80
Ifrd2
Hyal3
Lsmem2
Mllt6
Mettl16
Pop7
Sp1
Ptpn6
Grcc10
Lrba
Ikzf5
Acadsb
Clasp1
Ttc41
Hsp90b1
Chmp4b
Ctnnb1
Cwc25
1700001P01Rik
Nsun4
Wdfy3
Gps2
Eif5a
Slc15a4
Zfp286
Rpp38
Acbd7
Nanp
Scap
Rif1
Tmem18
Ddx20
Ndufaf3
Impdh2
Zfp523
Ankrd40
Gm51425
Agl
B230219D22Rik
Phc2
Stil
Mcfd2
Ikbip
Apaf1
Cep350
Prr14
Schip1
Copb2
Kdm2b
Rab3a
Mpv17l2
Ifi30
Tmem181a
Clec11a
Shank1
Ubqln5
Spata33
Chmp1a
Zfp141
Smim7
Zfp386
Mtmr9
Tab3
Matr3
Gpr157
Riok2
Xpa
Taok1
Smc1b
Fadd
Actn2
Gm5165
Rpl9
Lias
Ccnb1
Mapk8
Smim8
Gm3448
Gm3417
Gm3435
Trim35
Olfr19
Fam214b
Mysm1
Gm3667
Cd9
Sec62
Fnbp4
Ap2a2
Gjc1
Rfx1
Trim11
Gm3173
Klhl18
Kif9
Rps6ka2
Zdhhc17
Rapgef6
Rbbp5
Fbxo27
Rab43
9030025P20Rik
Rpl35
Wdr38
Arpc5l
Otub2
Rps6
Lonp2
Ahctf1
Nmb
Rab5c
Cct8
Frzb
Bclaf1
Scaper
Slc39a9
Erh
Phf23
Gabarap
Dvl2
Tmem79
Smg5
Mars1
Dcp1a
Thada
Me2
Snx12
Yes1
Gpx4
Rnf11
Adam17
Mindy4
Gpr19
Adss
Sde2
Emilin1
Ost4
Vps28
Slc39a4
Kctd7
Olfr1339
Gm2237
Dusp6
Zyg11b
Tbc1d32
Socs3
Xrra1
Spcs2
Nudt2
Kif24
Rnf220
Hyou1
Rgs14
Lman2
Polr2h
Clcn2
Ramac
Tmem41b
Yipf3
Polr1c
Lrrc73
Nbeal1
Sipa1l1
Cdkn2a
Zc3hav1l
Zfp980
Mettl3
Zfp609
Zfp57
Fmr1nb
Wfs1
Vezf1
Osbpl2
Lrif1
Cd2ap
Tmem231
Gabarapl2
Pcca
Snx18
Slx4ip
Mkks
Srp19
Ncoa2
BC107364
Sufu
Actr1a
Khk
Znfx1
Tmem11
Eef1a1
Tm9sf4
Spata13
Samd10
Prpf6
Zfp512b
Dguok
Vcl
Pde2a
Gas1
Rrnad1
Isg20l2
Spint2
Ppp1r14a
Nrbf2
Klf2
Plekhb1
Rab7
Tmem129
Tacc3
Slbp
Fem1b
Mtfp1
Zfp280b
Arl15
H4f16
H2aj
Rnf212b
Calr
Rad23a
Qk
Gadd45gip1
Mib2
Porcn
Olfr57
Tdrd1
Ccdc186
Ube2cbp
Dop1a
Zfp428
Sh3gl1
Chaf1a
Hck
BC004004
Ppil1
Ints6
Ncl
Dido1
Gid8
Dedd
Mphosph6
4931414P19Rik
Ppm1d
Cox7a2l
Hsbp1
Tmem116
Erp29
Rmi1
Hnrnpk
Nt5dc3
Sugp1
Mau2
Znrd1as
Znrd1
Ppp1r11
Erich1
Dlgap2
Prdm10
Gm7244
Heatr1
Gja1
Mreg
Poc5
Cic
Stn1
Tdrd12
Gng13
Rpusd1
Chtf18
Mslnl
Vps4b
Fbrsl1
Usp37
Cnot9
Arid3a
Wnk1
Abi1
Ybx1
Qsox2
Thrb
Pccb
Sncb
Gprin1
Ints12
Gstcd
Zfp184
Trim37
Pnpla6
Abhd11
Ostc
Pdcl3
H2bl1
Urm1
Gpr146
Zfyve28
Cfap99
Add1
Pemt
Ppp1r9a
Ints13
Fgfr1op2
Tep1
Ncapg
Med23
Ube2v2
Ssr4
Idh3g
Mtf2
Pmm1
Stk38
Psph
Cct6a
Mis18bp1
Sft2d1
Nek2
Pik3c3
Crip2
Tedc1
Crip1
Cenpu
Tecr
Gga1
Morc3
Tab1
Srcap
Lta4h
Hspa12a
Eno4
Msi1
Imp4
Ccdc115
Dck
Idh3b
Ebf4
Ttc32
Bambi
Hba-x
Nprl3
Aftph
H3c2
H1f1
H4c1
H3c1
H4c2
Luzp1
Csde1
Mmaa
Ercc5
Fnbp1
Os9
Zfyve19
Dnajc17
Cdk7
Akap13
L3mbtl2
Ino80
Mmut
Cenpq
Msra
Snrnp70
Kcna7
Cerk
Zcwpw1
Ppp1r35
Mepce
Rbpj
Tomm7
Psma1
Crot
Fam161a
Tdgf1
Lrrc2
Fgfr2
Smpdl3b
Suv39h1
Stoml2
Pigo
Rpl13a
Rps11
Flt3l
Rnf8
Anp32e
Tmem191c
Naaa
Rabif
Isl1
Ccdc62
Gm14685
DXBay18
Xlr5b
Lypla1
Crtc1
Lcmt2
Adal
Cbfa2t2
Utp6
Trpm7
Gas8
Dbndd1
Tcea1
Ralbp1
Sowahc
Septin10
C2cd2l
Hinfp
Mad2l1
Six2
Zfp991
Zfp978
Plod2
Cnot1
Rnf149
Pex14
Tcp11
Eml5
Tuba1b
Lrrn2
Slc39a7
Rxrb
Ring1
H2-Ke6
Tssc4
Col11a2
Nt5e
Tmem218
Abhd12
Gins1
Arhgap28
Gpbp1
Tarbp2
Map3k12
Rnh1
Mterf1a
Kbtbd8
Insr
Fitm2
Septin4
Nsmce3
Trappc6b
Pnn
Tal2
Rtn4
Zc3h4
Uxs1
Tmem143
Syngr4
Grasp
Nup205
Recql4
Lrrc14
Mfsd3
Olfr1388
Olfr1387
Ccz1
Thoc1
Ypel2
Mycl
Chmp5
Bag1
Smndc1
Tbc1d14
Cdk1
Mpp5
Tcte3
Ermard
Gtpbp6
Plcxd1
Zfp605
Thap11
Nutf2
Ccdc63
Cenpt
Csrnp1
Ranbp3
Srsf4
Pycr1
Sirt7
Mafg
Gltp
1700113H08Rik
Prcp
Ddias
Zfp786
Xpc
Lsm3
Zfp398
Polr3b
Usp13
Taf1b
Mak16
Leprot
Apobec3
Mxd4
Ranbp17
N4bp2l2
Pds5b
Chmp4c
Med6
Pds5a
Spag16
F13b
Phf2
Ccnj
Cdc25b
Spef1
Cenpb
Sgk1
Slc25a36
Jdp2
Ddt
Cabin1
Hdac6
Pdlim1
Pard6a
Acd
Defb11
Enkd1
4933405L10Rik