ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706958 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◣ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Gm815
Kank1
Txndc11
Asic1
Snx18
Frzb
Greb1
Cldn34d
Nfe2
Ubxn10
Pla2g2c
Nkx2-6
Kpna1
Uts2r
Tex19.1
Nhsl1
Alox5ap
Mnx1
1700024G13Rik
Hexb
Cars
Gmnc
Nrp1
Il31ra
Mcf2
Zfp879
Grm6
Frmd4a
Lmo4
Coro2b
Sipa1l1
E030030I06Rik
Gm4791
Bin2
Cmc2
Krt8
Zfp608
Megf11
Pgk1
Abhd6
Aqp6
Olfr806
Maml1
Atg4c
Kcng3
Nrf1
Dcaf4
Rab38
Sspn
Hoxc11
Hoxc10
1700017B05Rik
Pax3
Cd209a
Fbxw4
Npcd
Cbx6
Coro2a
Med27
Zfp516
Tnk2
Akap17b
Sostdc1
Edar
Epha4
Zfp362
Lhx4
Rnase12
Rnase11
Tagln3
Ccna1
Neurod1
Pakap
Sytl2
Lmo3
Lsg1
Fam43a
Aldh9a1
Lrmp
Cd93
Irgm2
Dnah7b
Col6a6
Tspan15
Cox8c
Smarcal1
Cerk
Hesx1
Myt1l
Nptx2
Bcar3
Scamp2
Mpi
Eml1
Capn8
Enpp1
Trex1
Shisa5
Stox2
Tbc1d14
Glrx2
Zgrf1
Larp7
Tnfrsf19
Mid2
Ntn1
1600014C23Rik
Senp6
Sepsecs
Spp2
Znrf4
Akap6
Numa1
Lce3a
Gper1
Slc17a8
Trpm3
Arnt2
Gm10710
Dchs2
Setd4
Cbr1
Kctd3
Nav2
Trim2
Arhgap33
Slc44a3
Csf2ra
Cdc14b
Aadacl2fm1
Rsph3b
Chga
Gja5
Zkscan1
Pmfbp1
Rasl11a
Wwox
Lrrtm4
Tmem125
Atp2b2
Oasl1
Slc25a40
Dbf4
Pxn
Mpp4
Rnf125
Plekha7
Fzd7
Copz1
Ndufaf4
Ric3
Ptpn11
Npepps
Sash1
Osbpl1a
Kremen1
Tmeff1
Lrrc4c
Tmco5
Pax6
Lmo1
Sema5b
Sfi1
Eif4enif1
Pgpep1l
Alkbh5
Nasp
Fndc3b
Olfr1274
Taf1d
4931406C07Rik
Peli3
Tiam2
Psmc6
Ero1a
Nt5c2
Ina
Nsmaf
Podn
Clcn4
Filip1
Gm51425
Cldn3
Cfap36
Afap1l1
Kdm2b
Mlph
Foxb1
St3gal1
Olfr93
Riok3
Bcas2
Pkdcc
Ypel1
1810055G02Rik
Fezf2
Tm9sf4
Olfr492
Ghrhr
Gm4450
Sms
Olfr60
Olfr527
Slc7a7
Timm8a1
Zfp407
Phc1
Btla
Ror1
Cdk19
Prkab1
Cdh12
Hsd3b4
Gm10681
Atoh7
Kif2c
Ndst1
Mef2c
Pdlim1
Eya1
Ptk2b
Slc6a5
Foxn3
Prdx3
Grk5
Gm5820
Bmt2
Tgfa
Dap
Chd7
Ywhaq
Gm5165
Ptpn12
Dock10
Zfp3
Csf2rb
Stx18
Hopx
Cxxc4
Grm4
Gdf5
Cep250
Rbm27
Spred1
St18
Dtwd2
Chrna5
Ednrb
Nfatc4
Slc9a9
Cfap54
Palmd
Gm21698
Gm21671
Gm21663
Gm10471
5031410I06Rik
Bsx
AI661453
1700001C19Rik
Hoxa1
Trub1
Hmga1b
Hmga1
AI413582
Sctr
Cfap221
Uts2b
Timm9
2700049A03Rik
Ptprz1
Gas2
Fancf
Cybb
Coa4
Cyp2j12
Laptm4b
Rab27a
Pigbos1
Pigb
Hacd4
Qrfpr
Arxes2
Ppfia2
Pdlim3
Bambi
Cbx5
Tspan12
Abca4
Taf12
Gmeb1
Zfp960
Csrp3
Pard6b
Fgd4
Cpt2
Fam171b
Cenpn
Lrrc52
Kdm4c
Sgk1
Cyrib
Armcx1
Esrrb
Sema6d
Nnt
Usp25
Sgms1
2410004B18Rik
Plekhh3
Cntnap1
Ccr10
Ascl1
Gnat2
Gm12500
Ampd2
Ngfr
Snca
1700003F12Rik
Morc1
Daam1
Grpel1
Gsc
Htr3a
Hoxb5
Hoxb4
Olfr1286
Ets2
Tmem30c
Lsm14a
Olfr1113
Enc1
Kcnn2
Neil1
Commd4
Ablim1
Gnas
Ttc32
Zcrb1
Pphln1
Pcdh1
Pmp22
Rbm47
Ip6k3
Vmn1r75
Lef1
Zfp423
Tmem65
Kat2a
Hspb9
Cul3
Olfr1047
Olfr1046
Mpp7
Wee2
Dennd11
Olfr1513
Angpt2
Matn2
AI429214
Astl
Knl1
Dipk1c
Tshz2
Gab1
Olfr1297
Cma2
Cdh23
Rgs13
Sulf2
Ms4a12
Ccpg1os
Ccpg1
Susd6
Ddx19b
Aars
Raet1d
4930503B20Rik
Ccr6
Ifnb1
Ciao3
P2ry12
Glis3
Apbb2
Chst7
Chmp1b
Dnajb8
Lrrn2
Dpf2
Vmn2r2
Zbtb8a
Angpt1
L3hypdh
Jkamp
Gpr139
Lix1
Acbd5
Pcdh12
Ttll3
Ugt3a2
Kifc3
Hmgxb4
Lpar6
Creb3l1
Olfm1
Onecut2
Ppia
A330070K13Rik
Tjp2
Etl4
Zfp703
Atp6v0a1
Ccdc107
Morf4l1b
Olfml1
Arhgef33
Mtss1
T2
Sp5
Fabp2
Chn1
Rtn1
Cadps2
Wnt16
Ctrb1
Nfasc
Ntn4
Enox1
Zfp385b
Rab3gap1
Map3k19
Uncx
Arid1b
Zfhx2
Thtpa
Ranbp9
Extl3
Tshr
Irf2bpl
Crybg3
Prrc2c
Dio2
Dusp23
Pknox1
Zfp982
Celf4
Rassf9
Unc5c
Arhgap35
Prkar2b
Gga2
Ets1
Hadh
Arhgap36
C1qa
Xylt2
Foxp1
Ctbp2
Dmrt3
Oser1
Fgf1
Ifnl3
Ifnl2
Shroom4
Atoh1
Vax1
Mrps9
Ebf2
Hdac11
Aen
Rcan3
Spaca7
Dlc1
Rgs8
Pnliprp2
Rab28
Mup4
Gm4861
Emb
Syt2
Fam214a
Ndufb4
Kcnip1
Cilp
Trp53bp1
Phc2
Zbtb18
Gm14410
Slc12a6
Npnt
Dennd4a
Celf6
Zdhhc21
Raph1
Slc44a5
Rab25
Gm14325
Olfr1282
Olfr1281
Rhbdd1
Acadl
Nol4
Ubiad1
Mtor
Ubqln4
Lamtor2
Gabrg2
Foxp4
Foxd3
Scn8a
Olfr107
Avl9
Ext1
Tm4sf4
Tet3
Tle4
Zeb2
Smchd1
Myef2
Pik3r5
Kcnh8
Adora3
Atp5g2
Ankrd36
Galr3
Raet1e
Raet1c
Raet1b
Serac1
Gtf2h5
Zfp715
Eef1akmt1
Nr6a1
Esr1
Dll1
Slc14a2
Olfr846
Myo1b
Gm21119
Tle3
Mylk
Tmem178b
Adk
Acly
Slc10a1
Abi2
Gm7244
Slc10a4
Nfkbil1
Ddx39b
Atp6v1g2
Ldlr
Lats2
Aff3
Strip1
Pla2g2d
Wdcp
Fkbp1b
Thrb
Mamdc2
Tmem147
Atp4a
Nutm1
Nop10
Krtap19-9b
Pik3c2g
Pde7b
Ebf3
Kctd9
Cdca2
Nxph3
Prkab2
Tmcc2
Sh3glb2
Miga2
Stom
Capza2
F2rl1
Slc4a4
Gpm6b
Bhlhe22
Rspo4
Pm20d1
Syt7
Bcas1
Pik3cd
Slco1a4
Xrcc6
Desi1
Bmp7
Smco4
Taar9
Taar8c
Dip2c
Pxylp1
Arhgap32
Zfhx4
Gm15319
Onecut3
Zfp217
Slc25a35
Rangrf
Tbc1d23
Cipc
Ankrd50
Eipr1
Gmpr
Gjd2
Zdhhc16
Exosc1
Tnip3
D7Ertd443e
Ddc
Lima1
Mafa
Rnase4
Ang
Epn2
Sympk
Elavl4
Ssu72
Arap1
Id3
Got1l1
Tbpl1
Ust
Plekha1
Crx
Ackr1
Lama2
Pik3r1
Itgb6
Taar7a
Dct
Rnf220
Sox5
Saxo2
Efl1
Tbx20
Asf1b
Zcchc24
Gys2
Dmrta1
Arhgef18
Map3k7
Tnks2
Atp8a1
Sulf1
Plekhm1
Kdm3b
Rtn4r
Zfp663
Ctss
Spry4
Myh3
Gm8165
Marchf7
Cnpy1
Psap
Rpl22l1
Taar7b
Spx
Pcdh7
Vnn1
4930467E23Rik
Apbb1
Fbxo31
Abracl
a
Mest
Efna5
Srp54c
Ptprn2
Mib1
Myt1
Fgfr2
Zfp931
Ppp1r17
Dnaja4
Sall4
Ahcyl2
Hapln1
Tnfaip8l1
Bdnf
Fzd5
Tamm41
Kif16b
Mrap
Adtrp
Vmn2r82
Myo10
Mical2
Tatdn2
Eno4
Adar
Cacng1
Gata6
Dusp6
Zfp869
Sem1
Gria1
Cwc27
Slc22a15
Fech
Rufy1
Bnc2
Ncald
Rce1
Rfc4
Cyth3
Rps26
Srp54a
Zfp566
Zfp260
Rpn2
Mroh8
Srp54b
Frem2
Cyyr1
Sec24b
Tent5c
Zfp808
Rps19
Lypd4
Dmrtc2
Chrna4
Nufip1
Gpalpp1
Fbxw7
Pon2
Cdh20
Cdh24
Kcnh2
Cd59a
Prkaa1
Gm6710
Gm14391
Msx1
H4bc24
H2bc23
H2ac24
H2ac23
Tmem52b
Parvg
Nfe2l3
Klf6
Dlgap1
Stfa3
Tmem229b
Ppp3ca
Anln
Spty2d1
Mrps25
Sv2a
Sf3b4
Cfap58
2510009E07Rik
Msi1
Cep128
Rufy3
Akr1b3
Inpp5k
Fbln1
Sypl
Stk32a
Ric8b
Grin3a
Ubash3a
Baz2b
H4c17
Rere
P2rx2
Lrcol1
Onecut1
Vmn2r102
Tbr1
Tcaf1
Zfp707
Rbm18
Mrrf
Ankdd1a
Aqr
Slc25a25
Pramel32
Ifna13
Gphb5
Gpa33
Col11a1
Wdr20rt
Scml4
Rxrg
Ank3
Zfp91
Lpxn
Cdca7
Prmt3
Htatip2
Tcf7l1
Kcnj16
Tmem107
Prpf40a
Arl6ip6
Nup93
Atp8b4
Scgn
Stk33
Tmem178
Clcc1
Serpinb2
Pcdh20
Otol1
Arid4a
Mro
H4c18
Gcgr
Tent5a
Cpeb4
Aff1
Slc9c1
Cul2
Abtb2
Camsap2
Lig3
Mrps33
Aldh2
Skap1
Olfr225
Slc39a10
Mical3
Ccl26
Erg
Olfr108
Tex46
Kdm1a
Tcf15
Rab8b
Cacna1c
Tsga10
Slc35f3
Baz1a
Hacd3
Ttc30a2
Ttc30a1
Zfp945
Mobp
Ddx58
Ptpro
Mad1l1
Ghrh
Usp44
Nt5e
Aldh8a1
Ccnq
Mfng
Whrn
Gm19410
Prdm1
Optn
Gramd1b
Gm38396
Pop5
Arid3b
Chmp6
Uqcc3
Ubxn1
Lbhd1
1810009A15Rik
Toporsl
Lingo3
Rab1a
Klhl29
Mtf1
Npffr2
Cotl1
Arl4d
Ogn
Gria3
Slc17a6
Pcbd2
Lama1
Arhgap28
Dclk2
Irx5
Zfp97
Nacc2
Cdkl5
C2cd5
Map4k2
Cfap43
Edem1
Cibar2
Arhgef2
Gm29797
Med16
Tex19.2
Gm17026
Fbxo32
Fam13b
Vmn2r5
Prtg
Lipm
Actn4
Zfp365
Piwil1
Slc13a1
Ilvbl
Dip2b
Lcat
Pbx3
Arid1a
Ank2
Phactr3
Tmem35b
Snx11
Cbx1
Secisbp2l
Rorb
Zfp90
Smim8
Gosr2
Lrig3
Gnai1
Cyth1
Zfyve26
Rad51b
Insyn2b
Otx1
Msra
Scrt2
Nrep
Rln3
Mtus2
Il27ra
Gspt1
Hspa8
Mbtps2
Vmn2r24
Nr4a2
Lrriq1
Tor3a
Cemip2
Usp15
Dst
Sh2d4a
Tenm2
Trafd1
Rabepk
Olfr959
Slc5a3
Mrps6
Mrvi1
Mpzl1
Erbb4
Rassf3
Gzmk
Lhx5
Elk4
Kitl
Zbtb12
Ehmt2
Muc15
Gm17124
Kcnip3
Synpo
Jmjd1c
Ubr5
Inip
Mgat4a
Iqschfp
Iqcj
Zc3h3
Zfp991
Zfp978
Smug1
Ppp3r1
Stx12
Homer2
Ivd
Gm17019
Rarb
Ndufaf3
Impdh2
Dalrd3
Dnaic2
Tti2
Snw1
Mbnl3
Mgam
Fbxo17
Elavl2
Micu2
Myo1e
Wdr17
Pitpnm1
Cdk2ap2
Fgf15
Asb1
Mbp
Mrpl22
Gemin5