ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388067 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◣ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Gm815
Asic1
Snx18
Ric3
Frzb
Nhsl1
Cars
Nfe2
Sipa1l1
Ccna1
Coro2b
Mnx1
Atg4c
Zfp879
Grm6
Ubxn10
Pla2g2c
Rab38
Mcf2
Dcaf4
Pakap
Nnt
Gmnc
Cmc2
Cenpn
Gm4791
Scamp2
Mpi
Kcng3
Uts2r
Tex19.1
Gas2
Fancf
1810055G02Rik
Aqp6
Sepsecs
Alox5ap
Lmo3
Nt5c2
Ina
Ascl1
Akap17b
Med27
Frmd4a
Lhx4
Txndc11
Neurod1
Megf11
Rnf125
Nrp1
Spp2
Mid2
Enpp1
Armcx1
Bin2
Pgk1
Lrrc52
Sgk1
Cyrib
Cd93
Sema5b
Esrrb
1700017B05Rik
Mlph
Kdm4c
1700024G13Rik
Tmem65
Zfp362
Kremen1
Cldn34d
Plekha7
Hoxc11
Hoxc10
Pmfbp1
Nptx2
Gja5
Lrmp
Bambi
Sulf2
Sema6d
Hesx1
Krt8
Arnt2
Ntn1
Olfr1513
Nrf1
Sgms1
Ets2
Plekhh3
Cntnap1
Ccr10
Zfp608
Mpp4
Lmo1
Tmem30c
Sytl2
Cdk19
Maml1
Dtwd2
Lmo4
Ms4a12
Col6a6
Pik3r5
Epha4
Nsmaf
Zfp516
Tmco5
Slc44a3
Npcd
Cbx6
Onecut2
Gnat2
Gm12500
Ampd2
Irgm2
Psmc6
Ero1a
Ypel1
Tgfa
Ttc32
Vmn1r75
1600014C23Rik
Tnk2
Hoxa1
Hoxb5
Hoxb4
Smarcal1
Uts2b
Cma2
Slc17a8
Coro2a
Rbm27
Phc1
Olfr93
Krtap19-9b
Htr3a
Bsx
Slc12a6
Nutm1
Nop10
Ugt3a2
Ngfr
Gm8165
Rasl11a
Sash1
Chga
Prkab1
Xylt2
Rnase12
Rnase11
Mrps9
Cybb
Tnfrsf19
Eml1
Zfp385b
Tmeff1
Enox1
Snca
Tbc1d14
Cfap36
Sostdc1
Olfr492
Pax6
Neil1
Commd4
Cbx5
Lef1
Cdh12
Slc44a5
Ifnl3
Ifnl2
A330070K13Rik
Ranbp9
Zcrb1
Pphln1
Fabp2
Enc1
Ccdc107
Copz1
Kcnn2
Chrna5
Cul3
Zkscan1
Numa1
Fzd7
Pgpep1l
2410004B18Rik
Tagln3
Unc5c
Dock10
Tm9sf4
Kif2c
Taf1d
4931406C07Rik
Fezf2
Olfr1047
Olfr1046
Edar
Tjp2
Ccr6
Zgrf1
Larp7
Slc6a5
Lsm14a
P2ry12
Wee2
Dennd11
Dipk1c
Uncx
1700003F12Rik
Onecut3
Lrrtm4
Angpt1
Olfr1113
Usp25
Qrfpr
Rtn1
Alkbh5
Hmga1b
Hmga1
AI413582
Arhgef33
Atp2b2
Hmgxb4
Ccpg1os
Ccpg1
Kpna1
Lsg1
Fam43a
Ablim1
Sp5
Bmt2
Atp6v0a1
St3gal1
Prkar2b
Celf6
Pcdh1
Gper1
Gm17124
Vwc2l
Morc1
Foxb1
Morf4l1b
Zeb2
Gm21698
Gm21671
Gm21663
Gm10471
5031410I06Rik
Kctd3
Rgs13
Fbxw4
Rbm47
Raet1d
Timm9
2700049A03Rik
Ndst1
Pax3
Zbtb8a
Pard6b
Ip6k3
Oser1
Pkdcc
Slc25a35
Rangrf
Ptpn11
Nasp
Zfp90
St18
Sh3glb2
Miga2
Dap
Vmn2r24
Abracl
Foxn3
Kifc3
Greb1
Ciao3
Acbd5
Npepps
Ywhaq
Ctss
Gm4861
Rufy3
Grpel1
Mib1
Senp6
Daam1
Myef2
Rab25
Ubqln4
Lamtor2
Gm17026
Knl1
Nav2
Kcnh8
Hexb
Gdf5
Cep250
Susd6
Chn1
Taf12
Gmeb1
Cfap58
Slc25a40
Dbf4
Peli3
Kctd9
Cdca2
Atoh1
Raet1e
Raet1c
Raet1b
Filip1
Ets1
Tmem35b
Ttll3
Kat2a
Hspb9
Olfr1297
Ptpn12
Wdcp
Fkbp1b
Sec24b
Dennd4a
Lpar6
Tspan15
Map3k7
Hsd3b4
Gm10681
Nkx2-6
Glrx2
Myt1l
Trpm3
Arhgap36
Olfr1286
Gm4450
Shroom4
Smco4
Zfp982
AI429214
Strip1
E030030I06Rik
Nfe2l3
Celf4
Hadh
Trp53bp1
Sulf1
Bcar3
Ifnb1
Chst7
Acly
Tcaf1
Rab27a
Pigbos1
Pigb
Ankdd1a
Pm20d1
Astl
Abhd6
Ddc
Il31ra
Glis3
Nfasc
Vmn2r82
Ubash3a
Slc4a4
Wnt16
Tle4
Rps19
Lypd4
Dmrtc2
Rhbdd1
Dll1
Mamdc2
Gm5165
Ptk2b
Olfr846
Ctbp2
Dio2
Trub1
Stox2
Zbtb18
T2
Mup4
Rcan3
Ddx19b
Aars
Pdlim1
Mef2c
Eef1akmt1
Afap1l1
Raph1
Foxd3
Adar
Tiam2
Acadl
Cldn3
Zfp423
Crybg3
Prkn
Arhgap35
Zfp91
Lpxn
Phc2
Arhgap32
Matn2
Cyp2j12
Myo1b
Otol1
L3hypdh
Jkamp
Zfp3
Sms
Cdh24
Ebf2
Serac1
Gtf2h5
Ghrh
Mpp7
Hapln1
Adora3
Prdx3
Grk5
Pla2g2d
Mro
Znrf4
Pdlim3
Dlc1
Ebf3
Lima1
Serpinb2
Rab28
Cdkl5
Ror1
Lats2
Stk33
Fam171b
Cadps2
Gga2
Slc10a1
Lipm
Arhgef18
Ackr1
Scgn
2510009E07Rik
Hacd4
Ptprn2
Nacc2
Ppia
Pxylp1
Stx18
Arxes2
Atoh7
Marchf7
Slco1a4
Prpf40a
Arl6ip6
Atp5g2
Dpf2
Zfp217
Irx5
Frrs1l
Sem1
Rgs8
Fgfr2
Rfc4
Hacd3
Ptprz1
Kcnh2
Atp8a1
Kif16b
Tbpl1
Kdm3b
Cilp
Rps26
Gm14325
Olfr806
Timm8a1
4930503B20Rik
Mtss1
Tnks2
Gnas
Syt7
Tamm41
Gpr139
Pllp
Fam214a
Spred1
Bcas2
Ntn4
Sypl
Tshz2
Tmem178b
Chd7
Asf1b
Onecut1
Zdhhc21
Galr3
Lig3
Scn8a
Rab8b
Myo1e
Foxp4
Cep128
Zfp715
Plekhm1
Xkr5
Lix1
Zdhhc16
Exosc1
F2rl1
Ttc28
Nfkbil1
Ddx39b
Atp6v1g2
C1qa
Tspan17
Zfhx2
Thtpa
Erbb4
Ndufaf4
Irs4
Stom
Angpt2
Trex1
Shisa5
Pxn
Cemip2
Lrrn2
Etl4
Rspo4
Cyth1
Schip1
Foxp1
Inpp5k
Abtb2
Lrrc4c
Bmp7
Smchd1
Adk
Lims1
Snx11
Cbx1
Asb4
Gpm6b
Msx1
Tenm3
Abca4
Lce3a
Plekha1
Cnpy1
Hopx
Dmrt3
Aen
Pcdh12
Cdc14b
Avl9
Arl4d
Cdh23
Ext1
Gm14410
Epn2
Cyyr1
Capza2
Gpr1
Wbp2nl
Vnn1
Cyth3
Ghrhr
Ankrd36
Lrrc36
Fgf1
Gm38396
Cd36
Gm5820
Cwc27
Saxo2
Efl1
Fam13b
Slc13a1
Eno4
Tbr1
Cul2
Aff1
Dusp23
Adtrp
Zfp960
Sall4
Apbb1
Pim2
Cldn14
Cenpv
Rnase4
Ang
Ubiad1
Mtor
Olfr62
Slc16a2
Rab5a
Mup13
Thrb
Mbtps2
Apbb2
Zfp808
Gpr21
Slc9a9
Eipr1
Msi1
Pde7b
Cdh20
Mrpl22
Gemin5
Det1
Gpr85
Secisbp2l
Nol4
Cdk7
Akap6
Nr6a1
Gpa33
Vstm2a
Rtn4r
Gata6
Elk4
Zfp931
Pm20d2
Gpr141
Gm51425
Zfp365
Vmn2r23
Tmc7
Tmc5
Tcea3
Pmp22
Rassf9
Ldlr
Snx16
Dis3l2
Frem2
Mrps25
Olfr1026
Olfr1024
Rexo1
Irf2bpl
Sctr
Cfap221
Erc2
Arhgap33
Bdnf
Urm1
Ppfia2
Kcnj16
Myl12b
Myl12a
Bcas1
Pop5
Spty2d1
Tanc1
Cox8c
Creb3l1
Gmpr
Csn3
Chmp6
Pdcd1lg2
Ncald
Htr1d
Prdm1
Aldh2
Olfr959
Sptlc2
Chrna4
Btla
Tbc1d23
Pon2
Kdm2b
Emb
Syt2
Ptpn9
Grm4
Lama2
Akr1b3
Sacs
Smim15
Sh2d1a
Ednrb
Fgd4
Aldh8a1
Tyr
Hhip
Lsm1
Bag4
Rce1
Aqr
Adam6a
Cd209a
Pik3c2g
Slc7a7
H4bc24
H2bc23
H2ac24
H2ac23
H4c17
2210418O10Rik
Synpr
Krtap26-1
Negr1
Fchsd2
Acaa2
Rtraf
Rufy1
H4c18
Rarb
Rragd
Tle3
Cacna1c
Epb41l3
Piwil1
Dnajb8
Abi2
Nr4a2
Barhl1
Gm11837
Ppp1r17
Slc9c1
Rcor3
Bhlhe22
Lingo3
Zc3h3
A1bg
Pgm5
Batf
Baz2b
Cotl1
Chmp1b
Got1l1
Nfatc4
Gabrg2
Mafa
Pik3r1
Gys2
Prkaa1
Pipox
Tmem52b
Samhd1
Zfp987
Zbtb12
Ehmt2
Pde4b
Coa4
St6gal1
a
Otud1
Trim2
Gphb5
Tyro3
Tshr
Arhgef2
Carf
Fkbp5
Eif2s2
Slc17a6
Plec
Ctrb1
Fzd5
Dlgap1
Cipc
Gm29797
Zmym2
Jmjd1c
Stk32a
Rhpn2
Prrc2c
Spx
Slc52a3
Fbxo31
Ahcyl2
Actn4
Nxph3
Slc22a15
Rpn2
Mroh8
Accsl
Mad1l1
Ndufaf3
Impdh2
Dalrd3
Spata7
Smu1
Sympk
Gria3
Mtus2
Ogt
Rps10
Errfi1
Qser1
Aldh9a1
Larp4
Gab1
Arap1
Lrig3
Gnai1
Ttll8
Alpk3
Mark4
Exoc3l2
Eya1
Ccnt2
Ttc23
Gpr137
Bad
Acp6
Pax2
Cep350
Ddx6
Zfp664
Ccdc92
Phactr2
Hdac11
Slc25a25
Tcf7l1
Edem1
Rassf3
Rps6kl1
Arid4a
Fras1
Nkx1-1
Olfm1
Insyn2b
Krt222
Prmt3
Htatip2
Ppp2r2b
Ten1
Acox1
Capn8
Gm6710
Gm14391
Arid3b
Pbx3
Mrvi1
Homer2
Scd3
Fam151a
Hs3st3a1
Tet3
Gpatch2l
Ssu72
Csta3
Myh3
Usp15
Gpr61
Gnai3
Wdr20rt
Ubr5
Zfp991
Zfp978
Radil
Tmem229b
Pak3
Hes7
Aloxe3
Anln
Rpl12
Lrsam1
Spns1
Lat
Stx12
Gtdc1
Aplp1
Olfr60
Olfr527
Slc14a2
Ankrd50
Tbx20
Parvg
Col11a1
Tex19.2
Tmco3
Dcun1d2
Tceal1
Ngef
Neu2
Golph3
Olfr235
Smim8
Zfyve26
Rad51b
Scrt2
BC055324
Mettl18
Usp17lb
Usp17la
Nbdy
Pcdh7
Sv2a
Sf3b4
Tcf15
Rmdn1
Cpne3
Vmn2r2
Nup93
Dip2b
Lefty2
Unc13b
Rab3gap1
Map3k19
Extl3
Gng3
Bscl2
Pcbp4
Abhd14b
Abhd14a
Tsga10
Pcbd2
Smad2
Atoh8
Sorbs1
Zfp703
Tenm2
Rdh11
Rnf38
Rgmb
Slc25a19
Pknox1
Cfap54
Kitl
Ssr2
Csf2ra
Klf6
Olfr225
LOC666331
Gm11634
Fam126a
Arid1b
Ndufb4
Esr1
Psap
Slc35f3
Gm773
Zfp451
Rdm1
Tsc22d1
Has2
Impa2
Cbfb
Tatdn2
Slc25a4
Mfng
Zfyve1
Shmt2
Nxph4
Tm4sf4
Lhx9
Mpzl1
Scg2
Asb6
Prrx2
Taar7a
Taar7b
Sh2d4a
Ppp6r3
Apobec2
Pdha1
Tcf12
D7Ertd443e
Tor3a
Il17ra
Penk
Slc39a10
Grap2
Eps8
Prph
Jam3
Anxa2
Chil1
Setd4
Cbr1
Elavl4
Fbln1
Prtg
Fbxo17
Gm14326
Cyp2b10
Sh3pxd2a
Il2rg
Gm614
Foxo4
Zcchc24
Zfp691
Ermap
Xrcc6
Desi1
Podn
Tent5a
Asb1
Thbs1
Nars
Foxd4