ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388070 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◣ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Snx18
Txndc11
Cars
Gm815
Nfe2
Pgk1
Ric3
Frzb
Asic1
Ascl1
Ccna1
Cldn34d
Mnx1
Atg4c
Zfp879
Grm6
Gas2
Fancf
Cmc2
Cenpn
Sgk1
Aqp6
Greb1
Onecut2
Dcaf4
Coro2b
Gm4791
Alox5ap
Kdm4c
Lmo3
Uts2r
Tex19.1
Sema6d
Frmd4a
Lhx4
Kpna1
Sipa1l1
Cdk19
Abhd6
Mcf2
Armcx1
Rab38
Pakap
Nkx2-6
Spp2
Nrp1
Fbxw4
Krt8
Ubxn10
Pla2g2c
Sema5b
Daam1
Hesx1
Nt5c2
Ina
Nptx2
Gmnc
Lmo1
Zfp362
Usp25
1810055G02Rik
Pmfbp1
Nnt
Lrrc52
Olfr1513
Cd93
Mid2
Dock10
Tmem65
Col6a6
Pla2g2d
Ablim1
Megf11
Akap17b
Chga
Scamp2
Mpi
Nhsl1
Uts2b
Ip6k3
E030030I06Rik
Sp5
Rnf125
Cox8c
Fabp2
Epha4
Il31ra
Olfr806
Pik3r5
Neurod1
Mrps9
Plekha7
Tmem30c
Sspn
Olfr1047
Olfr1046
Sepsecs
Kremen1
Atp2b2
Zfp385b
Psmc6
Ero1a
Aldh9a1
Enpp1
Elavl4
Mpp4
1700003F12Rik
Abracl
Ifnb1
Rab3gap1
Map3k19
Snca
Zfp516
St18
Setd4
Cbr1
Dmrt3
Sympk
Foxa3
Arid1b
Enox1
Filip1
Ets2
2410004B18Rik
Ntn1
Celf6
Lmo4
1700017B05Rik
Ypel1
Arnt2
Mlph
Enc1
Bambi
Hoxb5
Hoxb4
Wee2
Dennd11
Pcdh1
1700024G13Rik
Timm8a1
Gnat2
Gm12500
Ampd2
Dio2
Stx18
Bmp7
Esr1
Rgs13
Kcng3
Hexb
Hoxa1
Ebf2
Saxo2
Efl1
Fezf2
Rab25
Ubqln4
Lamtor2
Rspo4
Med27
Dst
Rnase12
Rnase11
Slc14a2
Slc25a35
Rangrf
Tent5c
Smarcal1
Plekhh3
Cntnap1
Ccr10
Cerk
Chn1
Pgpep1l
Eif2s2
Edar
Aadacl2fm1
Tle4
Senp6
Prkab1
Gabrg2
Sgms1
Gm5820
Sulf2
Copz1
Raet1d
Matn2
Gdf5
Cep250
Olfr1286
Rassf9
Pknox1
St3gal1
Glis3
Neil1
Commd4
Cyrib
Morc1
Celf4
Unc5c
Ciao3
Ctbp2
Acly
Tnfrsf19
Pax6
Lsm14a
Ddx19b
Aars
Gm21698
Gm21671
Gm21663
Gm10471
5031410I06Rik
Cldn3
Chst7
Pcdh20
Gcgr
Bin2
Rtn1
Slc17a8
Slc44a3
Chrna5
Epn2
Lrrtm4
Gper1
Nasp
Serpinb2
Kifc3
Scn8a
Tbpl1
Xylt2
Nav2
Gzmk
L3hypdh
Jkamp
Raet1e
Raet1c
Raet1b
Ndufaf4
Rab27a
Pigbos1
Pigb
1600014C23Rik
Hoxc11
Hoxc10
Gsc
Coro2a
Ttc32
Apbb2
Cd209a
Htr3a
Krtap19-9b
Tmem229b
Tshz2
Cxxc4
Slc6a5
Zkscan1
Chmp1b
Ttll3
Gja5
Tmco5
Thrb
Ugt3a2
Vwc2l
Hmga1b
Hmga1
AI413582
Maml1
Tbc1d14
Cma2
Lrrn2
Wwox
Lrmp
Zfp608
Bcas2
Kif16b
Cfap36
Lef1
Uncx
Myh3
Eml1
Ctrb1
Nfe2l3
Vmn2r82
Ubash3a
Sytl2
Acbd5
Sdk2
Mrap
Mpp7
Tmem147
Atp4a
Pxk
Morf4l1b
Phc2
Rasl11a
Tspan15
Olfr1274
Oasl1
Kcnip1
Hs3st3a1
Zfp423
Gnas
Ccdc107
Ankdd1a
Ptpn11
Zbtb18
Ahcyl1
Rabepk
Susd6
Ppia
Rsph3b
Pxylp1
Atoh7
Qrfpr
T2
Sostdc1
Dlc1
Slc12a6
Nutm1
Nop10
Npepps
Onecut1
Hdac11
Tnk2
Astl
Sec23b
Nckap5
Aen
Kcnj14
Grwd1
Lsg1
Fam43a
Fam171b
Mef2c
Chrna4
Pcbd2
Timm9
2700049A03Rik
Slc35f3
Cacng4
Pax3
Mib1
Cadps2
Tshr
Lima1
Irf2bpl
Trp53bp1
Tagln3
Pkdcc
Angpt1
Mtss1
Knl1
Gm4861
Elk4
Csf2ra
Dll1
Npcd
Cbx6
Ranbp9
Pmp22
Olfr1297
Ccr6
Etl4
Olfr107
Kcnh8
Ednrb
Ctss
Scgn
Foxd3
Cdca7
C1qa
Ssu72
Commd8
Lix1
Zfp217
Cul3
Angpt2
Alkbh5
Zeb2
Cbx5
Pramel32
Ifna13
Ccnq
Rab1a
Thbs1
BC055324
Ttc34
Foxb1
Ebf3
Homer2
Gphb5
Akap6
Foxp1
Tmeff1
Atp5g2
Lysmd4
Bhlhe22
Srp54c
Esrrb
Galr3
Pde7b
Myt1l
Irgm2
Tgfa
Apbb1
Ptprn2
Cpeb4
Tceal1
Frrs1l
Spcs3
Schip1
Foxp4
Tmcc2
Crybg3
Ust
Fgfr2
Vmn1r75
Olfr846
Gspt1
Lhx5
B4galnt3
Srp54a
Srp54b
Mup2
Mup15
Bsx
AI429214
Zbtb8a
Tle3
Nkx3-2
Kif2c
Onecut3
Gpr137
Bad
Bmt2
Stox2
Cybb
Gga2
Oser1
Myt1
Eno4
Adamts18
Cmtm8
Dhrs7
Foxn3
Kctd9
Cdca2
Gjd2
Dip2b
Fras1
Ttc23
Ifnl3
Ifnl2
Iqschfp
Iqcj
Vmn2r2
Wnt16
Cep128
Phf10
Rnf182
Ndst1
Bnc2
Rps26
Ttll8
Eef1akmt1
a
Fbxo17
Pgrmc2
Bcar3
Rbm47
Tjp2
Vmn2r102
Gcn1
Fndc3b
Npnt
Hopx
Foxa2
Slc44a1
Ngfr
Trub1
Dennd4a
Zfp90
Ptpn12
Smad5
Dipk1c
Lrp8
Aebp2
Grpel1
Cyp2j12
Pax2
Ntn4
Rcan3
Mrps33
2410141K09Rik
Pag1
Wdr59
Pm20d1
Atp8b4
Kirrel
Rhbdd1
Sem1
Dtwd2
Myo1b
Pias1
Sgce
Peg10
Rcor3
Cdh12
Nol11
4930503B20Rik
Peli3
Olfm1
Vnn1
Ank3
Tsga10
Mbp
Glrx2
Pard6b
Zfp982
Slc10a4
Lig3
Lrrc36
Ywhaq
Plekhm1
Cemip2
Rab28
Pon2
Sfi1
Eif4enif1
A330070K13Rik
Camsap2
Tm9sf4
Nsmaf
Sncaip
Zgrf1
Larp7
Taf12
Gmeb1
Gm5165
Hadh
Stk32a
Eya1
Nrf1
Stk33
Tmem132d
Gm21119
Gm15319
Tet3
Ubr5
Sgo2a
Dusp6
Kcnn2
Olfr1113
Eipr1
Rpl12
Lrsam1
Gpr139
Tmem156
Baz2b
Ush2a
Taf1d
4931406C07Rik
Numa1
Olfr93
Afap1l1
Capn8
Olfr492
Sash1
Fzd7
Zcrb1
Pphln1
Rbm27
Dap
Kat2a
Hspb9
Slc25a40
Dbf4
Tiam2
Znrf4
Gab1
Cdh23
Ms4a12
Ccpg1os
Ccpg1
Trpm3
Phc1
Trex1
Shisa5
P2ry12
Coa4
Dnajb8
Pxn
Dpf2
Ghrhr
Ptk2b
Pcdh12
Hmgxb4
Abca4
Lrrc4c
Lpar6
Creb3l1
Zfp703
Atp6v0a1
Olfml1
Arhgef33
Hsd3b4
Gm10681
Prdx3
Grk5
Grm4
Spred1
Nfasc
Zfhx2
Thtpa
Arxes2
Extl3
Prrc2c
Pdlim3
Dusp23
Arhgap35
Prkar2b
Ets1
Arhgap36
Gm51425
Btla
Gm4450
Fgf1
Shroom4
Cdc14b
Zfp3
Atoh1
Ror1
Vax1
Kdm2b
Spaca7
Rgs8
Pnliprp2
Mup4
Hacd4
Ptprz1
Podn
Sms
Arhgap33
Emb
Syt2
AI661453
1700001C19Rik
Fam214a
Ndufb4
Cilp
Cfap54
Csrp3
Gm14410
Lce3a
Zdhhc21
Kctd3
Raph1
Slc44a5
Gm14325
Slc9a9
Olfr1282
Olfr1281
Acadl
Nol4
Ubiad1
Mtor
Chd7
Laptm4b
Avl9
Ext1
Tm4sf4
Smchd1
Myef2
Fgd4
Adora3
Ankrd36
Serac1
Gtf2h5
Zfp960
Zfp715
Pdlim1
Dnah7b
Olfr60
Olfr527
Nr6a1
Mylk
Tmem178b
Adk
Sctr
Cfap221
Slc10a1
Abi2
Gm7244
Nfkbil1
Ddx39b
Atp6v1g2
Ldlr
Lats2
Aff3
Strip1
Wdcp
Fkbp1b
Mamdc2
Trim2
Pik3c2g
Nxph3
Prkab2
Sh3glb2
Miga2
Stom
Capza2
F2rl1
Slc4a4
Gpm6b
Syt7
Bcas1
Pik3cd
Ppfia2
Slco1a4
Xrcc6
Desi1
Smco4
Taar9
Taar8c
Slc7a7
Dip2c
Arhgap32
Zfhx4
Tbc1d23
Cipc
Ankrd50
Gmpr
Zdhhc16
Exosc1
Tnip3
D7Ertd443e
Ddc
Mafa
Rnase4
Ang
Gm10710
Dchs2
Arap1
Id3
Got1l1
Plekha1
Crx
Ackr1
Lama2
Pik3r1
Itgb6
Taar7a
Dct
Rnf220
Sox5
Tbx20
Asf1b
Zcchc24
Gys2
Dmrta1
Arhgef18
Map3k7
Tnks2
Osbpl1a
Atp8a1
Sulf1
Kdm3b
Rtn4r
Zfp663
Spry4
Gm8165
Marchf7
Cnpy1
Psap
Rpl22l1
Taar7b
Spx
Pcdh7
4930467E23Rik
Fbxo31
Mest
Efna5
Nfatc4
Zfp931
Ppp1r17
Dnaja4
Sall4
Ahcyl2
Hapln1
Tnfaip8l1
Bdnf
Fzd5
Tamm41
Adtrp
Csf2rb
Myo10
Mical2
Tatdn2
Adar
Cacng1
Gata6
Zfp869
Gria1
Cwc27
Slc22a15
Fech
Rufy1
Ncald
Rce1
Rfc4
Cyth3
Tspan12
Zfp566
Zfp260
Rpn2
Mroh8
Frem2
Cyyr1
Sec24b
Zfp808
Rps19
Lypd4
Dmrtc2
Nufip1
Gpalpp1
Fbxw7
Cdh20
Cdh24
Kcnh2
Cd59a
Prkaa1
Gm6710
Gm14391
Msx1
H4bc24
H2bc23
H2ac24
H2ac23
Tmem52b
Parvg
Klf6
Dlgap1
Stfa3
Ppp3ca
Anln
Spty2d1
Mrps25
Sv2a
Sf3b4
Cfap58
2510009E07Rik
Msi1
Rufy3
Akr1b3
Inpp5k
Fbln1
Sypl
Ric8b
Grin3a
H4c17
Rere
P2rx2
Lrcol1
Tbr1
Tcaf1
Zfp707
Rbm18
Mrrf
Aqr
Slc25a25
Gpa33
Col11a1
Wdr20rt
Scml4
Rxrg
Zfp91
Lpxn
Prmt3
Htatip2
Tcf7l1
Kcnj16
Tmem107
Prpf40a
Arl6ip6
Nup93
Tmem178
Clcc1
Otol1
Arid4a
Mro
H4c18
Tent5a
Aff1
Slc9c1
Cul2
Abtb2
Aldh2
Skap1
Olfr225
Slc39a10
Mical3
Ccl26
Erg
Olfr108
Tex46
Kdm1a
Tcf15
Rab8b
Cacna1c
Baz1a
Hacd3
Ttc30a2
Ttc30a1
Zfp945
Mobp
Ddx58
Ptpro
Mad1l1
Ghrh
Usp44
Nt5e
Aldh8a1
Mfng
Whrn
Gm19410
Prdm1
Optn
Gramd1b
Gm38396
Pop5
Arid3b
Chmp6
Uqcc3
Ubxn1
Lbhd1
1810009A15Rik
Toporsl
Lingo3
Klhl29
Mtf1
Npffr2
Cotl1
Arl4d
Ogn
Gria3
Slc17a6
Lama1
Arhgap28
Dclk2
Irx5
Zfp97
Riok3
Nacc2
Cdkl5
C2cd5
Map4k2
Cfap43
Edem1
Cibar2
Arhgef2
Gm29797
Med16
Tex19.2
Gm17026
Fbxo32
Fam13b
Vmn2r5
Prtg
Lipm
Actn4
Zfp365
Piwil1
Slc13a1
Ilvbl
Lcat
Pbx3
Arid1a
Ank2
Phactr3
Tmem35b
Snx11
Cbx1
Secisbp2l
Rorb
Smim8
Zfp407
Gosr2
Lrig3
Gnai1
Cyth1
Zfyve26
Rad51b
Insyn2b
Otx1
Msra
Scrt2
Nrep
Rln3