ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706967 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◣ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Sipa1l1
Frmd4a
Zfp879
Mcf2
Gm4791
Prkab1
Zfp516
Zfp608
Spp2
Atg4c
Nhsl1
Ndufaf4
Pkdcc
Tagln3
Neurod1
Lrmp
Kdm4c
Zkscan1
1600014C23Rik
Bsx
Ypel1
Angpt2
Alkbh5
Lmo1
Lmo3
Sema6d
Gnat2
Dennd11
Tmco5
Rasl11a
Eml1
Sytl2
Mpp4
Apbb2
Cdh12
Abca4
Gm5165
Lrrc4c
Wee2
Kifc3
Chmp1b
Timm9
2700049A03Rik
Cyp2j12
Tmem30c
Rgs8
Trex1
Ppia
Myh3
Knl1
Ubiad1
Uts2b
Dusp23
Cbx5
Zcrb1
Pphln1
Trp53bp1
Raph1
Ptprz1
Btla
Ttc32
Gm51425
Lix1
Etl4
Bambi
D7Ertd443e
Chd7
Arhgef33
Vax1
Myo1b
Zdhhc16
Exosc1
Xrcc6
Desi1
Plekhm1
Otx1
Zfhx4
Cipc
Mest
Cnpy1
Arhgap36
Apbb1
Ankrd50
Atp6v0a1
Pdlim1
Klf6
Dpf2
Acbd5
Asf1b
Fbxo31
Ccpg1os
Morf4l1b
Optc
Zfp3
Acadl
Bnc2
Myt1
Arhgef2
Fgd4
Laptm4b
Zfp869
Akr1b3
Olfr107
Zfp960
Mro
Slc25a25
Vangl2
Nol4
Ubap1l
Bhlhe22
Rorb
Scml4
Uqcc3
Hacd4
Chmp6
Arid1a
Ubqln4
Gspt1
Slc10a4
Iapp
Lpar6
Pcbp4
Dct
Rraga
Tnks2
Zfp473
Vrk3
Elavl2
Ccdc107
Elmo2
Cibar2
Nup93
Kdm1a
Mobp
Ttc30b
Lrp2bp
Tbr1
Zfp260
Pdlim3
Cul2
Hspa8
Asic1
Iqschfp
Iqcj
Gm14325
a
Gm14410
Ints4
Ptms
Armc12
Eef1akmt1
Filip1
Trafd1
Taar9
Dstn
Lama2
Adar
Dennd4a
Zfp385b
Zfp97
Bscl2
Gng3
Cep57
Mageh1
Lingo2
Gm6712
Fam222b
Ush2a
Foxp1
Optn
Ubr5
Rnase9
Insyn2b
Ranbp9
Alk
Txndc2
Cep120
Rln3
Mpzl1
Gcat
Inip
Zc3h12c
Acyp1
Fabp7
Riok3
2210418O10Rik
Crppa
Atxn7l1
Runx1t1
Mrps28
Olfr108
Bcar3
Sacs
Cyyr1
Lgals12
C2cd5
Zfp667
Gm1604b
Gm38396
Zfp931
Olfr1240
Inpp4b
Mrpl22
Cdca7
Atp6v1e2
Olfr1532-ps1
Tbc1d9
Sh3glb2
Pak2
Zeb2
Syt16
Tamm41
Ttc34
Kcnk2
Cyth1
Rcor1
Zfyve26
Rad51b
Myo10
Rexo1
Serpine3
Wdr95
Wdr63
Gm6710
Gm14391
Lrrtm2
Rab5b
St18
Prtg
Susd2
Ndst4
Myog
Kcnj16
Stk33
Ptpn14
Impdh2
Slc9a9
Sox5
Epha7
Bms1
Galc
Zbtb32
Sall1
Cdh20
Zfp991
Gm11837
Sh2b2
Pclo
Mad1l1
Frmpd4
Fgfr2
Arid4a
Lig3
Zmat4
Chodl
Tdg
Aste1
Galnt5
Arap2
Osgin2
Fam110b
Fnbp1
Pde4b
Pcdh15
Ccdc171
Zcchc24
Slain1
Gm14326
Agtrap
Hesx1
Fbxw2
Armc3
Chn1
Btbd17
Rdh11
Radil
Eif5b
Rdm1
Slc10a6
Trim24
Bod1l
Rbfox2
Ferd3l
Neo1
Rhoh
Trdn
Gse1
Abcd3
Prdm12
Commd4
Dusp4
Acpp
Stk38
Sulf1
Tcf12
Tmem119
Plekhg2
Nkx3-2
Fmc1
Spns1
Nbdy
Lrp6
Acsm2
Phlpp1
Trappc6b
Stx12
Klhl24
Fam32a
Fam149a
Ascc3
Thsd7a
Zranb1
Atg2a
Mbnl1
Psd3
Defb2
Mfap3l
Grb2
Mcub
Defb10
Med25
1700024G13Rik
Prpf18
Phc1
Tesk2
Zfp984
Tmem242
2510009E07Rik
Nme7
Blzf1
Unc13b
Cry1
Rs1
Tuba1b
Rpia
Il34
Tyro3
Has2
Schip1
Ccdc90b
Stra6
Fyco1
Gsc
Mlc1
H3c6
Tcerg1
Add3
Mospd1
Hdac9
Usp1
Msantd4
Lipm
Zbtb11
Pgk1
Ppp6r3
Rufy3
3300002I08Rik
Ppm1e
Tbce
Dusp10
1700056E22Rik
Tenm2
H2bc8
H2ac8
Apobec2
Eif2b5
Sec61g
Prpf40a
Maco1
Adarb2
Zfp944
Zfp758
Kmt5c
Ccng1
Esyt1
Rbm25
Zfp317
Elmo1
Krt222
Zfp521
Zfp981
Gnat3
Clasp2
Sall4
Mfsd13b
Cdr2
Neurog2
Cep112
Tex2
Poglut3
Zfp182
Ngef
Neu2
Zbed4
Rnpc3
Baat
Tbx6
Fbxo11
Jmjd1c
Ptpn3
Kmt5a
Rgmb
Ctbp2
Sox4
Rundc1
Ptges3l
Zbtb18
Zfp995
Ngdn
Ptprg
Foxp2
Dclk2
Rxrg
Ttc23
Gxylt2
H3c11
Gas7
Fip1l1
Fbln5
Ldb1
H2-T23
Ssr3
Marchf9
Epb41l3
Agk
Edem1
Mageb3
Ctdspl2
Fzd7
Btf3l4
Ptgr2
Nr4a2
Tbc1d5
Aqp3
Fgf13
Phactr2
Ywhab
Cnih4
Ephb3
Nedd8
Gmpr2
Acp6
Ndnf
Anapc15
Eml2
Zfp943
Zfp942
Gm45871
Efcab2
Ppp6c
Olfm4
Zfp524
Fiz1
Elp5
Ctdnep1
Pcdhb12
Cstf1
G2e3
Epc1
Brd2
Dusp6
Trappc6a
Bloc1s3
Prpf8
Maoa
Ankrd10
Smarce1
Cdh10
Tpcn2
Sptbn1
Mcur1
Stk11ip
Ccdc12
Bco1
Rsph4a
Mthfd1
Eif3f
Tpbg
Lrrc9
Efna1
Dpy19l3
Slc19a3
Nell2
Rcan2
Sdhaf3
Mcts1
Ipcef1
Plch1
Lgr4
Eif3h
Cbwd1
Hoxb1
Celf3
Gpr1
Zfp212
Nkain3
Sorbs2
Morc3
Scfd1
Calu
Imp4
Ccdc115
Zmym4
Hoxa2
Gatad1
Nf1
F8a
Cd200r1
Anxa4
Riox2
Emp1
Itgav
Dll3
Zfp946
Prr14
Otx2
Grwd1
Top3b
Slc44a3
Cdh6
Endod1
Pum2
Trak2
Nip7
Cog8
Cdc20b
Mta3
Ap3m2
Coa6
Slc45a3
Robo3
H13
Ncoa4
Tfe3
Col28a1
Olfr368
Dipk1b
Fndc5
Cln6
Selenos
Rsu1
Arhgap11a
Sp5
Wls
Sgcz
Car13
Capn12
Gpx1
Rrm2
Zzef1
Cyb5d2
Uvrag
Gtf3c6
Inava
Tmem74
1110032F04Rik
Arhgap12
Mrpl15
Pcdhgc4
4930583I09Rik
Prr5l
Pde1a
Marf1
Dcaf15
Arnt
Tpgs2
AW554918
Prps1
Bdh2
Elk1
Rgs17
Exoc3l2
Vps36
Isy1
Insig1
Sgpp1
Ckap2
Rftn2
Kctd16
Plcxd1
Dhx32
Sfi1
Tsc22d1
Fxr2
Atp5g1
Cpd
Rap2b
Nrep
Vcp
Ubqln1
Zbed3
Tdrkh
Slco4c1
Leng8
Ubp1
Mynn
Itpr3
Polr2m
Zfyve16
Arfgap2
Pdha1
Fam53a
Zfp985
Zfp971
4930550C14Rik
Gm14305
Zfp945
M6pr
Krtap3-3
Adk
Trmt112
Prdx5
Il4ra
Clcn3
Gm3448
Gm3417
Gm3435
9030025P20Rik
Ino80
Hikeshi
Ttc37
Arsk
Rbm18
Mrrf
Ankrd44
Pop4
Aldh9a1
Soga3
Mpc2
Dcaf6
Fbxo16
Nupl1
Mtln
Prkacb
Aff4
Snx4
Dus3l
Cwc22
Osbpl3
Plxdc2
Rapgef6
Ubr2
Rap1b
Trhr
Plod2
Eda
Rnft1
Upf3b
Gem
Emc4
Sema6b
Hexim2
Slc2a5
Arf4
Slc46a3
Romo1
Nfs1
Tmcc1
Npc1
Nfatc3
Supt20
Frrs1l
Tcte3
Ermard
Kntc1
Phospho2
Ccdc173
Wdr27
1600012H06Rik
Tspyl4
Ppm1b
Zc3h18
Fcor
Tanc1
Chkb
Rps16
Morn4
Ctif
Mef2c
Adam12
Cnot3
Zfp408
Fam214a
Rpl7
Smad2
H2bc3
Lars
Prkg1
Noto
Apela
Triqk
AI987944
Gramd1b
Actl6a
Lyplal1
Tmem260
Sspn
Slc22a17
Helt
Arhgef39
Rpl39
Dbnl
Ticam1
Anxa5
1810062G17Rik
Gdap1
Rad52
Prr23a2
Clns1a
Abcc2
Amt
Ppp1r14d
Arhgap20
Prkrip1
Adamts10
Trappc2l
Galns
Slc25a10
Edaradd
Dipk1a
Marcks
Ppp1r16b
Sh3gl1
Abcg2
Tm9sf3
Larp4
Prkcq
Nfyc
Lbx1
Oser1
Camsap2
Senp7
Nfatc4
Spag9
Bag4
Pdcl3
Tmem94
Hdac5
Emilin1
Csf1
Zmynd11
Cdv3
C1galt1
Pxmp4
Hexim1
C77080
Taf5
Omt2a
Wdr44
Zfp536
Mmp14
Arrdc4
Il10rb
2010003K11Rik
Dpp6
Wdr17
Spns2
Ccdc162
Frzb
Naa20
Zfp410
Pbx2
Dynlt1b
Cradd
Pcx
Ddx27
Cdc23
Kxd1
Tmem167b
Ccdc77
Pum1
Tmf1
Vps11
Rad54l
Tcp11l1
Ip6k2
Tox2
Tedc2
Cdk11b
Cwf19l2
Fam161a
Ramp2
Ccnd1
Sprr2a3
Chek1
Hacd2
Glra3
Anp32a
Mars1
Efemp2
Zfp982
Cntrl
Sik3
Pafah1b2
Nemf
Cass4
Sgpp2
Lemd2
Zfp763
Esrrg
Hjurp
A730008H23Rik
Mtf2
Garem1
Ruvbl1
Evi5l
Otop3
Kcnab1
Phc2
Cln5
Usp32
Tbcel
Espl1
Rps5
Chmp5
Bag1
Camk4
Mlx
C330018D20Rik
Bves
4930453N24Rik
Nudt18
Kif3b
Kctd18
Jade1
Atp7a
Crem
Zcchc4
Rpl23a
Pomc
Gucy2g
Cdk14
Txnrd1
Zdhhc24
Grn
Ssrp1
P2rx3
Smim19
Slc20a2
Pax6
Ank2
Aqp4
Kdm3a
Coq7
Phf12
Nt5c3
2310033P09Rik
Topors
Smim27
4833420G17Rik
Stxbp5l
Slc37a4
Epha5
Ube2j1
St3gal5
Tmx2
Med19
Wasf1
Alg8
Lin28b
Fam169a
Ttc9b
Ing1
Psat1
Gpm6a
Tomm20
Tubb4b
Ing2
Mecom
Zbtb24
Itgbl1
Edn1
Iqsec1
Mitf
Stoml2
Setd1b
Klhl26
Tial1
Rnf135
Impa1
Cdca7l
Tada2a
Ybey
Tmem179
Mettl15
Mcm3ap
Eef1akmt4-ece2
Eef1akmt4
Arfgef1
Alg3
Cpvl
Mrps10
Map3k3
Cpa2
Gramd1c
Ppp2r3a
Ptpn4
Gpank1
Csnk2b
Tbc1d10b
Mylpf
Tef
Rnf43
Rpl3
Mid1
Nudt3
Tcaf1
BC031181
Tmco3
Dcun1d2
Smtnl1
Klhl5
Evl
Coasy
Mcc
Ints9
Hmbox1
Siah1a
Rhpn2
Osbp
Gbx1
Degs1
Mettl2
Kctd15
H2bc22
H2ac22
Zfp867
Polr2a
Snph
Il17d
Nudt1
Cfap58
Nucks1
Coq3
Magi1
Sbk1
Nars
Lrrc23
Rprd2
Asxl2
Ccnj
Thap4
Carf
Tceal8
Il5ra
Gns
Oaf
Rapgef2
Nhej1
Limk1
Dclk1
Tle4
Oip5
Nusap1
Ghitm
Naa38
Cyb5d1
Glce
Il18rap
Frmd4b
Eloc
Zfp276
Vps9d1
Tmem11
Med18
Top3a
Smcr8
Tnrc18
Shq1
Maf
Snrpc
Klhl32
Lypd1
Rubcn
Map2k7
Ppm1k
Rpn2
Mroh8
Lrpap1
Car3
Kat2b
Lig4
Abhd13
Zfp146
Vps52
Rps18
Samd9l
Pacrgl
Hpcal4
Nup35
Dap
Tubgcp6
Tmem229b
Tepsin
Psmb8
Ndufaf8
Fntb
Opa3
Spry1
Tspan2