ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388067 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◣ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Nhsl1
Sipa1l1
Atg4c
Zfp879
Mcf2
Gm4791
Lmo3
Ascl1
Frmd4a
Neurod1
Spp2
Pgk1
Kdm4c
Lrmp
Bambi
Sema6d
Zfp608
Mpp4
Lmo1
Tmem30c
Sytl2
Zfp516
Tmco5
Onecut2
Gnat2
Ypel1
Ttc32
1600014C23Rik
Uts2b
Bsx
Nutm1
Rasl11a
Prkab1
Eml1
Cbx5
Cdh12
Zcrb1
Pphln1
Ccdc107
Zkscan1
Tagln3
Dennd11
Alkbh5
Arhgef33
Ccpg1os
Ccpg1
Wee2
Atp6v0a1
Morf4l1b
Zeb2
Timm9
2700049A03Rik
Pkdcc
Sh3glb2
Kifc3
Acbd5
Knl1
Dennd4a
Arhgap36
Trp53bp1
Gm5165
Pdlim1
Eef1akmt1
Ctbp2
Raph1
Adar
Acadl
Cyp2j12
Myo1b
Zfp3
Mro
Pdlim3
Stk33
Lipm
2510009E07Rik
Hacd4
Prpf40a
Dpf2
Rgs8
Fgfr2
Ptprz1
Gm14325
Tnks2
Tamm41
Chd7
Asf1b
Lig3
Plekhm1
Lix1
Zdhhc16
Exosc1
Phc1
Angpt2
Trex1
Etl4
Cyth1
Abca4
Cnpy1
Gm14410
Cyyr1
Gpr1
Ppia
Gm38396
Tbr1
Cul2
Dusp23
Zfp960
Apbb1
Ubiad1
Apbb2
Cdh20
Mrpl22
Nol4
Zfp931
Gm51425
Rexo1
Kcnj16
Chmp6
Htr1d
Sptlc2
Btla
Lama2
Akr1b3
Sacs
Fgd4
Bag4
2210418O10Rik
Epb41l3
Nr4a2
Gm11837
Bhlhe22
Filip1
Chmp1b
Pde4b
a
Tyro3
Arhgef2
Cipc
Zbtb18
Rhpn2
Fbxo31
Mad1l1
Impdh2
Smu1
Qser1
Ebf2
Larp4
Exoc3l2
Ttc23
Acp6
Cep350
Phactr2
Slc25a25
Nkx1-1
Insyn2b
Krt222
Gm6710
Gm14391
Myh3
Gnai3
Zfp991
Ubr5
Radil
Spns1
Ankrd50
Olfr235
Zfyve26
Rad51b
Nbdy
Nup93
Slc9a9
Unc13b
Bscl2
Pcbp4
Gng3
Rdh11
Rgmb
Klf6
Zfp451
Rdm1
Tsc22d1
Has2
Mpzl1
Ppp6r3
Apobec2
Tcf12
D7Ertd443e
Prtg
Gm14326
Zcchc24
Xrcc6
Desi1
Nars
Rorb
Gspt1
Stk38
Zfp985
Zfp97
Gatad1
Ssr3
Lmo4
Kcnk2
Ckap2
Trim24
Zfp212
H2-T23
Zfp980
Tbc1d9
Alk
Zbtb11
Fbxw2
Olfr108
Tmem67
Vax1
Optn
Foxp1
Sspn
Olfr1240
Prps1
Rsph4a
Kcnab1
Zfhx4
Kdm1a
Zfp984
Pclo
Osgin2
Ldb1
Lgals12
Otx2
Slc10a4
Rxrg
Ptpn14
Arap2
Mest
Atxn7l1
Inpp4b
Gm6712
Zmat4
Zfp182
Mbnl1
Zfp869
Abcd3
Foxa2
Zc3h12c
Serpine3
Hesx1
Ccdc171
Inip
Laptm4b
Arid1a
Zfp385b
Ccdc12
Ptms
Dct
Tbce
Otop3
Tex2
Gm13030
Pop4
Arhgap11a
Ap3m2
Snrpc
Mrps28
Itgb1
C2cd5
Nrep
Zranb1
Tuba1b
Maoa
Scml4
H3c10
H2ac13
Ttc30b
Cep120
Top3b
Nemf
Runx1t1
Nkx3-2
Oasl1
Bnc2
Defb10
Nlrp9b
Tpbg
Hexim1
Sertad4
Lpar6
Tfeb
Schip1
Zfp988
Cibar2
Sfi1
Bms1
Prkrip1
BC031181
Tmed1
Olfr107
Ttc34
Acpp
Gm2007
Gm4724
Gm2026
Gm14434
Gm14430
Gm14308
Lrp2bp
Phlpp1
Tmem242
H2bc22
H2ac22
Raly
Fbxo16
Rcor1
Ccdc90b
Trappc6a
Bloc1s3
Slc4a2
Cdk5
Bcar3
Rpia
Elavl2
Marchf9
Fam149a
Lrrc57
Haus2
Sh3gl1
Zfp473
Vrk3
Myt1
Fmc1
Mpc2
Dcaf6
Prpf18
Fggy
Rpl39
Cpvl
Clcn4
Apela
Rln3
Zfp534
Ptgs2
Commd4
Zfp944
Zfp758
Hnrnpa1
Fam222b
Grwd1
Tdg
Anapc15
4930550C14Rik
Marf1
Cry1
Baz1a
Fam110b
H3c11
Taf5
Mcub
AB124611
Tesk2
Neurog2
Rs1
Fgf13
Slco4c1
Psd3
Crybg1
Dpf3
Helt
Zfp260
Eif5b
Arid4a
Klhl32
Tmem74
Bod1l
Ranbp9
Rbm25
St18
Zfp990
Efemp2
Golm2
Cdv3
Ints4
Usp1
Wdr63
Slc46a3
Trappc6b
Zbtb24
Nucks1
Sema6b
Lrpap1
Txndc2
Eomes
Efna1
Clasp2
Zmynd11
Thsd7a
Epc1
Yipf5
Pnn
BC107364
Chkb
Mfsd13b
Cdr2
AI987944
Cep57
Tcerg1
Eif3f
Adam12
Nell2
Dbnl
Poc5
Ankrd10
Cradd
Armc3
Edem1
Plxdc2
Zkscan5
Vangl2
Chn1
Gcat
Fabp7
Dipk1a
Shc4
Rraga
Cfap126
Lingo2
Gpx1
Cdh6
Zfp995
Arfgap2
Gm45871
Robo3
Slc4a8
Samd9l
Il18
Bco2
Polr2m
Nkain3
Dmap1
Plekhg2
Alyref2
Fam53a
Vps11
Thap4
Zfyve16
Gapvd1
Zfp981
Prepl
Dars
Mageh1
Tbc1d5
Ptgr2
Leng8
Rhoq
Mtfr2
Phox2b
Sox4
Zfp971
Wls
Lrrc9
Ruvbl1
Urgcp
Selenos
Uhrf1bp1
Gm3667
Sptbn1
Med25
Gm3448
Gm3417
Gm3435
Slc10a6
Syt16
Cwf19l2
Pdha1
Ush2a
Rad54l
Rps24
Triqk
Gtf3c6
Cdk12
Add3
Gnb2
Cactin
Uqcc3
Poglut3
Aqp4
Ppp1r12c
Ube2d3
Nudt3
Lrrc23
Cd38
C1galt1
Rps5
Itgbl1
Gpat4
Ilf2
Sulf1
Phospho2
Ccdc173
Ddx39b
Clcn3
Rbfox2
Zfp609
Ppp1r10
Cnih4
Espl1
Racgap1
Mcur1
1700024G13Rik
Msantd4
Lsm6
Egln2
Ndufaf4
Mobp
Trafd1
Taar9
Ubap1l
Iapp
Dstn
Myo10
Olfr1532-ps1
Rnase9
Elmo2
Acyp1
Optc
Sec61g
Otx1
Riok3
Asic1
Ncoa4
Atp6v1e2
Hspa8
Cep112
Mlc1
Crppa
Ccng1
Pak2
Rab5b
Gm20594
Slc19a3
Wdr95
Sall1
Sox5
Galc
Ferd3l
Armc12
Fam32a
Gse1
Lrrtm2
Epha7
Zfp667
Aste1
Sp5
Rufy3
Klhl24
1110032F04Rik
Ndst4
Gm1604b
Sh2b2
Ppp6c
Lrrc4c
Eml2
Fyco1
Kctd16
H2bc8
H2ac8
Neo1
Iqschfp
Iqcj
Eda
Cdk14
Fnbp1
Myef2
Defb2
Jmjd1c
Fzd7
Pum2
Stx12
Arhgap12
Agk
Fip1l1
Tfe3
Tbx6
Agtrap
Prkcq
Slc22a17
Kmt5c
Grb2
Ptpn3
Sorbs2
Zbtb32
Ywhab
Nme7
Blzf1
Fbxo11
Chodl
Myog
Eif2b5
Plcxd1
Trdn
Sall4
Lgr4
Bco1
Frmpd4
Ascc3
Gsc
Susd2
Cdca7
Zfp317
Aqp3
Mospd1
3300002I08Rik
Rnft1
Mthfd1
Dusp10
1700056E22Rik
Atg2a
Rapgef6
Ngef
Neu2
Dusp4
Rhoh
Pls1
Rsu1
Galnt5
Zbed4
Hdac9
Slain1
Prkacb
H3c6
G2e3
Lpar1
Lrp6
Pcdh15
Zfp524
Fiz1
Omt2a
Zfp946
Rps29
Cass4
2410141K09Rik
Btbd17
Adamts10
Rnpc3
Mrpl15
H2bc3
Stk11ip
Slc44a3
Gm14305
Romo1
Nfs1
Pcdhgc4
Zmym4
Gxylt2
Trak2
Dclk1
Tpcn2
Dynlt1b
Dcaf15
Dhx32
Tcte3
Ermard
Elp5
Ctdnep1
Smarce1
Arhgef39
Ngdn
Tmem119
Prkag2
Nf1
4930583I09Rik
Scfd1
Coa6
Pcdhb12
Prdm12
Edn1
Olfm4
Cstf1
Rundc1
Ptges3l
Zfp521
Rrm2
Hoxa2
Zfp943
Zfp942
Eif3h
Evi5l
Pum1
Foxp2
Zfp945
Ergic3
Dclk2
6430550D23Rik
Cdh10
Ndnf
Zzef1
Cyb5d2
Tcp11l1
Osbpl3
Esyt1
Carf
Ubr2
Gnat3
Upf3b
F8a
Cbwd1
Lbx1
Alg8
M6pr
Ppp2r3a
Tsga10
Sgcz
Trappc2l
Galns
Itgav
Tmcc1
Orc5
Il6st
Gm14322
Elmo1
Ubqln4
Rcan2
Ephb3
Brd2
Rftn2
Kntc1
Arnt
Fxr2
Dpy19l3
Tenm2
Nfatc4
Morc3
Iqsec1
Gramd1b
Dusp6
Aff4
Car13
Baat
Prr14
Zfp867
Tex21
Mitf
Maco1
Dll3
Oser1
Vps36
Nip7
Cog8
Col28a1
Rps16
Sdhaf3
Il34
Phc2
Pdcl3
Nedd8
Gmpr2
Adarb2
9030025P20Rik
Cd200r1
Mrps10
Krtap3-3
Isy1
Mta3
Adk
Camsap2
Kmt5a
Osbpl1a
Lemd2
Actl6a
Ttc37
Arsk
Ank2
Ptpn4
Anxa4
Lrriq4
Lrrc34
Insig1
Ube2j1
Cln5
Usp32
Ip6k2
Polr2a
Mcts1
Tmx2
Med19
Zfp982
Ubp1
Pcx
Atp5g1
Zfp763
Tmem94
Mynn
Hoxb1
Fndc5
Morn4
Rap1b
Krt23
Tbcel
Ddx27
Stxbp5l
Lars
Trhr
Ctif
Celf3
Veph1
Smarca5
Ptprg
Tcaf1
Gcfc2
Slc37a4
Npc1
Hdac5
Nfatc3
Hdac4
Olfr368
Uvrag
Fbln5
Emilin1
Coq3
Top3a
Smcr8
Osbp
Cdc23
Sgpp1
Pxmp4
Esrrg
Btf3l4
Gem
Mfap3l
Psat1
Mc4r
Rubcn
Tox2
Tceal8
Mageb3
Ctdspl2
Wdr44
Vcp
Txnrd1
Nupl1
Sapcd1
Chmp5
Bag1
Lgi4
Aldh9a1
Asb4
Snph
Endod1
Prpf8
Lin28b
Itpr3
Ticam1
Capn12
Coq7
Ankrd29
Pik3r4
Hsd17b7
Cnot3
Gpm6a
Ddx55
Chd9
Slc25a10
Glra3
Lrp10
Tmco3
Dcun1d2
Bdh2
Zbtb12
Riox2
Tma7
Olfr122
Ccdc51
Pitx1
Dipk1b
Emc4
Zfp536
Stra6
Tspyl2
Tomm20
Imp4
Frzb
Fam161a
Elk1
Ccdc115
Ppm1b
Etv1
Calu
Mmp14
Emp1
Zfp408
Derl1
Mef2c
Spag9
Phf12
Nomo1
Erlec1
Asb3
Tedc2
Il5ra
Frmd4b
Ipcef1
Cdk11b
Zdhhc24
Mtln
Fam169a
Stoml2
Gal3st3
Nt5c3
Porcn
Camk4
C330007P06Rik
Ubqln1
Opa3
Il17d
Zfp37
St3gal5
Smarca4
Smtnl1
Fam214a
Map2k7
Zbed3
Plch1
Hexim2
Lmbrd1
C77080
Anxa5
Adamts9
1810062G17Rik
Dux
Pdia6
Klhl5
CK137956
Ppm1k
Dnajc13
Anp32a
Arrdc4
Cpd
Tle4
Setd1b
Ripor2
Ccn6
Fzd2
Rgs17
Prkg1
Mlx
Gdap1
Slc12a6
Senp7
Plekhb1
Mcc
Tpp1
C330018D20Rik
Rad52
Golga7
Sypl2
Map3k3
H13
Amigo1
Hjurp
A730008H23Rik
Ino80
Soga3
Magi2
Supt6
Sdf2
Prr23a2
Kcnj13
Hax1
Lingo4
Wdr27
1600012H06Rik
Ppm1l
Inava
Gbx1
Mansc1
Mtf2
Efcab2
Mkrn3
Zfp976
Grn
Dusp5
Klhl26
Bves
4930453N24Rik
Slc45a3
Zc3h18
Trmt112
Ric3
Prdx5
Nudt18
Kif3b
Nfatc2ip
Lypd1
Prune2
Bspry
Zfp318
Timm17a
Evl
Nras
Naa10
Tubb4b
Tdrkh