ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388068 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◣ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Nhsl1
Atg4c
Mcf2
Zfp879
Gm4791
Sipa1l1
Lmo3
Frmd4a
Kdm4c
Spp2
Ascl1
Uts2b
Bambi
Mpp4
Pgk1
Sema6d
Neurod1
1600014C23Rik
Lrmp
Rasl11a
Lmo1
Eml1
Gnat2
Zfp516
Tmem30c
Ypel1
Zfp608
Sytl2
Tmco5
Bsx
Ttc32
Ccpg1os
Cdh12
Tagln3
Onecut2
Cbx5
Nutm1
Zcrb1
Pphln1
Morf4l1b
Ccdc107
Zkscan1
Prkab1
Dennd11
Sspn
Zeb2
Apbb2
Timm9
2700049A03Rik
Kifc3
Arhgef33
Acbd5
Wee2
Phc1
Trex1
Asf1b
Stk33
Chd7
Cyp2j12
Pkdcc
Hacd4
Knl1
Prpf40a
Sh3glb2
Rgs8
Alkbh5
Zfp3
Eef1akmt1
Gm14410
Mad1l1
2510009E07Rik
Zbtb18
Vax1
Arhgap36
Gm51425
Kcnj16
Angpt2
Atp6v0a1
Tamm41
Cnpy1
Lix1
Nr4a2
Adar
Dennd4a
Olfr1240
Chmp1b
D7Ertd443e
Mro
Pdlim3
Ptprz1
Etl4
Trp53bp1
Zfp960
Myo1b
Ctbp2
Sptlc2
Foxp1
Rln3
Lama2
Ubr5
Plekhm1
Fgfr2
Cyyr1
Cipc
Fbxo31
Gm5165
Olfr235
Sfi1
Impdh2
Gm13030
a
Gm11837
C2cd5
Tcf12
Fgd4
Gpr1
Pop4
Gatad1
Btla
Zfp931
Ubiad1
Cyth1
Tnks2
Mest
Zfhx4
Ttc23
Nol4
Top3b
Abca4
Acadl
Lipm
Dusp23
Gm14325
Gnai3
Raph1
Nup93
Apbb1
Cdh20
Apobec2
Plcxd1
Sox4
Olfr107
Slc10a4
Osgin2
Lrp2bp
Rgmb
Has2
Zfp984
Zc3h12c
Zfp97
Inpp4b
Klf6
Arhgef2
Prkag2
Cul2
Scml4
Ranbp9
Prtg
Exoc3l2
Arap2
Lig3
Zfp534
Ppia
Fam222b
Prps1
Zranb1
Thap4
Filip1
Tbr1
Mrpl22
Olfr108
Slc9a9
Dclk2
Bcar3
Gm38396
Zfyve26
Rad51b
Zfp980
Anapc15
Zfp260
Optn
Tsc22d1
Rorb
Hesx1
Armc3
Slco4c1
Nkain3
Uqcc3
Riok3
Bag4
Nkx1-1
Krt222
Nars
Akr1b3
Insyn2b
Nfatc4
Fbxw2
Kdm1a
Rexo1
Myh3
Lrpap1
Tfeb
Inip
St18
Unc13b
Itgbl1
Mobp
Xrcc6
Desi1
Gm6710
Gm14391
Bscl2
Zfp991
Clcn4
Atxn7l1
Edem1
Arhgap11a
Tyro3
Htr1d
Ubap1l
H3c10
H2ac13
Cibar2
Acp6
H2-T23
Maoa
Cpvl
Nup85
Slc25a25
Adam12
G2e3
Tbc1d9
BC107364
Myt1
Nkx3-2
Tuba1b
AB124611
Mpzl1
Pum1
Klhl24
H2bc22
H2ac22
Oasl1
Pde4b
Bms1
Ptpn14
Phactr2
Chmp6
Gspt1
Clasp2
Pclo
Rxrg
Fip1l1
Ccdc171
Ldb1
Lpar6
Rnft1
Gm6712
Ppp6r3
Gapvd1
1110032F04Rik
Nlrp9b
Kat2b
Lgals12
Mlc1
Rab5b
Radil
Rcor1
Larp4
Bhlhe22
Rhpn2
Zfp985
Zfp385b
Mcub
Prkcq
Zbtb11
Lrrc57
Haus2
Stk38
Ywhab
Otx2
Thsd7a
Htr3b
Rdh11
Trim24
Sulf1
Commd4
Gpx1
Slc22a17
Smarca5
Itpr3
Abcd3
Laptm4b
Bnc2
Sacs
Grwd1
Rpia
Arfgap2
Tesk2
Trafd1
Zfp212
Qser1
Epb41l3
Cdh6
Dipk1a
Ush2a
Raly
Ttc30b
Eif3f
Nemf
Neurog2
Bod1l
Kntc1
Usp1
Pls1
Cry1
Pak2
Zmynd11
Mrpl15
Dux
Rdm1
Acyp1
Serpine3
Zdhhc16
Exosc1
Klhl32
Plxdc2
Ccng1
Zfp869
Cep57
Atg101
Fam110b
Mcur1
Rad54l
Phlpp1
Nucks1
Arhgap12
Fggy
Rab11a
Tdg
Dynlt1b
Vps11
Snrpc
Ppp1r10
Lsm6
Vps36
Ndufaf4
Dct
Ankrd50
Arid1a
Pdlim1
Gm14326
Foxa2
Taar9
2210418O10Rik
Iapp
Mrps28
Pcbp4
Dstn
Myo10
Dpf2
Zfp473
Vrk3
Txndc2
Olfr1532-ps1
Mageh1
Rnase9
Kcnk2
Ccpg1
Elmo2
Elavl2
Chn1
Alk
Lingo2
Vangl2
Ebf2
Cep120
Optc
Sec61g
Gcat
Otx1
Asic1
Ncoa4
Zcchc24
Spns1
Ints4
Cep350
Rraga
Nbdy
Plekhg2
Atp6v1e2
Zmat4
Fabp7
Hspa8
Cep112
Ttc34
Runx1t1
Crppa
Selenos
Acpp
Arid4a
Med25
Tcerg1
Rsph4a
Gng3
Gm20594
Slc19a3
Wdr95
Ccdc12
Sall1
Tex2
Tmem74
Sox5
Galc
Polr2m
Rs1
Ferd3l
Schip1
Zfp971
Armc12
H3c11
Fgf13
Fam32a
Gse1
Wdr63
Fmc1
Rbfox2
Fam149a
1700024G13Rik
Lrrtm2
Epha7
Msantd4
Marchf9
Tmem242
Zfp667
Aste1
4930550C14Rik
Zfp981
Ccdc90b
Sp5
Rufy3
Zfp995
Ndst4
Gm1604b
Sh2b2
Ppp6c
Ankrd10
Slc10a6
Lrrc4c
Eml2
Tbce
Syt16
Fyco1
Kctd16
H2bc8
H2ac8
Neo1
Poglut3
Iqschfp
Iqcj
Eda
Slc46a3
Cdk14
Ckap2
Ssr3
Mbnl1
Taf5
Fnbp1
Add3
Tbc1d5
Myef2
Defb2
Trappc6b
Jmjd1c
Fzd7
Pum2
Stx12
Rbm25
Ptgr2
Zfp182
Gm3448
Gm3417
Agk
Tfe3
Tbx6
Agtrap
Defb10
Kmt5c
Grb2
Ptpn3
Sorbs2
Zbtb32
Nme7
Blzf1
Fbxo11
Chodl
Myog
Eif2b5
Psd3
Nrep
Trdn
Sall4
Lgr4
Bco1
Frmpd4
Zfp451
Ascc3
Zfp944
Zfp758
Gsc
Susd2
Cdca7
Trappc6a
Bloc1s3
Zfp317
Zbtb24
Mpc2
Dcaf6
Uhrf1bp1
Gm3435
Aqp3
Cnih4
Lrrc9
Ptms
Mospd1
3300002I08Rik
Mthfd1
Marf1
Dusp10
1700056E22Rik
Triqk
Atg2a
Rapgef6
Ngef
Neu2
Dusp4
Rhoh
Prkrip1
Rsu1
Galnt5
Zbed4
Hdac9
Slain1
Prkacb
H3c6
Mfsd13b
Cdr2
Prpf18
Gm3667
Lpar1
Smu1
Lrp6
Gm45871
Pcdh15
Zfp524
Fiz1
Omt2a
Zfp946
Rps29
Robo3
Cass4
2410141K09Rik
Btbd17
Tpbg
Adamts10
Rnpc3
H2bc3
Wls
Stk11ip
Slc44a3
Gm14305
Ap3m2
Shc4
Romo1
Nfs1
Crybg1
Pcdhgc4
Zmym4
Gxylt2
Trak2
Gm2007
Dclk1
Tpcn2
Eif5b
Leng8
Dcaf15
Helt
AI987944
Tmem67
Dhx32
Tcte3
Ermard
Elp5
Ctdnep1
Smarce1
Ruvbl1
Arhgef39
Nell2
Efna1
Cd38
Ngdn
Efemp2
Tmem119
Slc4a8
Nudt3
Nf1
4930583I09Rik
Scfd1
Coa6
Rpl39
Sptbn1
Pcdhb12
Prdm12
Edn1
Olfm4
Cstf1
Rundc1
Ptges3l
Zfp521
Rrm2
Hoxa2
Zfp943
Zfp942
Eif3h
Evi5l
Foxp2
Fbxo16
Zfp945
Ergic3
6430550D23Rik
Otop3
Dpf3
Alyref2
Epc1
Cdh10
Ndnf
Zzef1
Cyb5d2
Tcp11l1
Osbpl3
Esyt1
Zkscan5
Carf
Ubr2
Gnat3
Upf3b
F8a
Cwf19l2
Cbwd1
Itgb1
Lbx1
Alg8
M6pr
Ppp2r3a
Tsga10
Sgcz
Trappc2l
Galns
Itgav
Tmcc1
Apela
Sh3gl1
Orc5
Il6st
Gm14322
Elmo1
Ubqln4
Rcan2
Ephb3
Brd2
Rftn2
Gm4724
Gm2026
Gm14434
Gm14430
Gm14308
Arnt
Pdha1
Fxr2
Dpy19l3
Tenm2
Kcnab1
Cradd
Cdv3
Dbnl
Dars
Clcn3
Morc3
Iqsec1
Gramd1b
Dusp6
Aff4
Car13
Baat
Prr14
Zfp867
Tex21
Mitf
Zfp988
Maco1
Dll3
Oser1
Nip7
Cog8
C1galt1
Col28a1
Chkb
Rps16
Sdhaf3
Il34
Phc2
Pdcl3
Nedd8
Gmpr2
Adarb2
9030025P20Rik
Cd200r1
Mrps10
Krtap3-3
Isy1
Mta3
Adk
Zfp990
Camsap2
Samd9l
Cfap126
Kmt5a
Osbpl1a
Lemd2
Actl6a
Ttc37
Arsk
Ank2
Ptpn4
Anxa4
Lrriq4
Lrrc34
Gtf3c6
Zfyve16
Insig1
Ube2j1
Cln5
Usp32
Ip6k2
Polr2a
Mcts1
Tmx2
Med19
Zfp982
Ubp1
Pcx
Atp5g1
Poc5
Zfp763
Tmem94
Mynn
Hoxb1
Fndc5
Morn4
Rap1b
Krt23
Tbcel
Ddx27
Stxbp5l
Lars
Trhr
Ctif
Celf3
Veph1
Ptprg
Tcaf1
Gcfc2
Slc37a4
Npc1
Hdac5
Nfatc3
Hdac4
Olfr368
Uvrag
Fbln5
Emilin1
Coq3
Top3a
Smcr8
Osbp
Espl1
Cdc23
Sgpp1
Pxmp4
Hnrnpa1
Esrrg
Btf3l4
Lmo4
Gem
Mfap3l
Psat1
Mc4r
Rubcn
Rps5
Urgcp
Tox2
Phox2b
Tceal8
Mageb3
Ctdspl2
Wdr44
Vcp
Txnrd1
Nupl1
Sapcd1
Chmp5
Bag1
Lgi4
Aldh9a1
Asb4
Snph
Endod1
Prpf8
Lin28b
Ticam1
Capn12
Coq7
Ankrd29
Pik3r4
Hsd17b7
Cnot3
BC031181
Gpm6a
Golm2
Eomes
Ddx55
Chd9
Slc25a10
Phospho2
Glra3
Ccdc173
Lrp10
Tmco3
Dcun1d2
Bdh2
Zbtb12
Riox2
Yipf5
Tma7
Olfr122
Ccdc51
Pitx1
Dipk1b
Emc4
Zfp536
Stra6
Tspyl2
Tomm20
Imp4
Frzb
Fam161a
Elk1
Ccdc115
Ppm1b
Etv1
Calu
Mmp14
Emp1
Fam53a
Zfp408
Derl1
Sema6b
Mef2c
Spag9
Phf12
Nomo1
Erlec1
Asb3
Tedc2
Il5ra
Frmd4b
Ipcef1
Zfp609
Cdk11b
Zdhhc24
Mtln
Hexim1
Fam169a
Aqp4
Stoml2
Gal3st3
Slc4a2
Nt5c3
Cdk5
Pnn
Porcn
Camk4
C330007P06Rik
Ubqln1
Opa3
Il17d
Zfp37
St3gal5
Smarca4
Smtnl1
Fam214a
Map2k7
Zbed3
Plch1
Hexim2
Lmbrd1
C77080
Anxa5
Adamts9
1810062G17Rik
Pdia6
Klhl5
CK137956
Ppm1k
Dnajc13
Anp32a
Arrdc4
Baz1a
Cpd
Tle4
Setd1b
Ripor2
Lrrc23
Ppp1r12c
Ccn6
Fzd2
Rgs17
Prkg1
Mlx
Gdap1
Slc12a6
Senp7
Plekhb1
Mcc
Tpp1
C330018D20Rik
Rad52
Golga7
Sypl2
Map3k3
H13
Amigo1
Hjurp
A730008H23Rik
Ino80
Soga3
Magi2
Supt6
Sdf2
Prr23a2
Kcnj13
Hax1
Lingo4
Wdr27
1600012H06Rik
Ppm1l
Inava
Gbx1
Mansc1
Mtf2
Efcab2
Mkrn3
Gpat4
Zfp976
Racgap1
Grn
Dusp5
Klhl26
Bves
4930453N24Rik
Slc45a3
Zc3h18
Trmt112
Ric3
Prdx5
Nudt18
Kif3b
Nfatc2ip
Lypd1
Prune2
Bspry
Zfp318
Timm17a
Evl
Nras
Naa10
Tubb4b
Tdrkh
2310033P09Rik
Tafa1
Rap2b
Cdc20b
Prepl
Ints9
Hmbox1
Tial1
Plod2
Il10rb
Snx4
Zswim1