ChIP-Atlas: Target genes

Potential target genes for Hdac3

Query protein: Hdac3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1722785 | Hippocampus
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hdac3's Target genes

◢ Hdac3: Average

◢ SRX2599799: 3T3-L1

◢ SRX2599800: 3T3-L1

◢ SRX2599801: 3T3-L1

◢ SRX2599802: 3T3-L1

◢ SRX6871352: 3T3-L1

◢ SRX6871353: 3T3-L1

◢ SRX6871354: 3T3-L1

◢ SRX17156728: Bone Marrow Cells

◢ SRX17156729: Bone Marrow Cells

◢ SRX17156730: Bone Marrow Cells

◢ SRX17156731: Bone Marrow Cells

◢ SRX21934344: Brown adipocytes

◢ SRX14674610: Brown adipose tissue

◢ SRX14674620: Brown adipose tissue

◢ SRX14674621: Brown adipose tissue

◢ SRX14674622: Brown adipose tissue

◢ SRX14674623: Brown adipose tissue

◢ SRX14674624: Brown adipose tissue

◢ SRX14674625: Brown adipose tissue

◢ SRX14674626: Brown adipose tissue

◢ SRX1890321: Brown adipose tissue

◢ SRX1890322: Brown adipose tissue

◢ SRX3284078: Dorsal root ganglia

◢ SRX3284079: Dorsal root ganglia

◢ SRX3284080: Dorsal root ganglia

◢ SRX3284081: Dorsal root ganglia

◢ SRX3284082: Dorsal root ganglia

◢ SRX3284083: Dorsal root ganglia

◢ SRX3284084: Dorsal root ganglia

◢ SRX3284085: Dorsal root ganglia

◢ ERX2789780: ES cells

◢ ERX2789782: ES cells

◢ ERX2789783: ES cells

◢ ERX2789784: ES cells

◢ ERX2789785: ES cells

◢ ERX2789786: ES cells

◢ SRX4887836: ES cells

◢ SRX4887837: ES cells

◢ SRX4887838: ES cells

◢ SRX4887839: ES cells

◢ SRX1158925: Hippocampus

◢ SRX1158926: Hippocampus

◢ SRX1158927: Hippocampus

◣ SRX1722785: Hippocampus

◢ SRX1722787: Hippocampus

◢ SRX100289: Liver

◢ SRX100290: Liver

◢ SRX100291: Liver

◢ SRX100292: Liver

◢ SRX100293: Liver

◢ SRX2039594: Liver

◢ SRX2039595: Liver

◢ SRX2039596: Liver

◢ SRX2039597: Liver

◢ SRX2039598: Liver

◢ SRX2039599: Liver

◢ SRX206481: Liver

◢ SRX206483: Liver

◢ SRX2375597: Liver

◢ SRX2375598: Liver

◢ SRX2375599: Liver

◢ SRX2375603: Liver

◢ SRX2375604: Liver

◢ SRX2375609: Liver

◢ SRX2375610: Liver

◢ SRX5543268: Liver

◢ SRX5543269: Liver

◢ SRX5543270: Liver

◢ SRX5543271: Liver

◢ SRX5543272: Liver

◢ SRX5543273: Liver

◢ SRX679440: Liver

◢ SRX679441: Liver

◢ SRX679442: Liver

◢ SRX679443: Liver

◢ SRX997769: Liver

◢ SRX997770: Liver

◢ SRX997771: Liver

◢ SRX997772: Liver

◢ SRX997773: Liver

◢ SRX997774: Liver

◢ SRX997775: Liver

◢ SRX997776: Liver

◢ SRX9843666: Lung cancer

◢ SRX9843667: Lung cancer

◢ SRX9843668: Lung cancer

◢ SRX9843669: Lung cancer

◢ SRX9843285: Lung tumors

◢ SRX9843286: Lung tumors

◢ SRX9843287: Lung tumors

◢ SRX9843288: Lung tumors

◢ SRX105109: Macrophages

◢ SRX105110: Macrophages

◢ SRX22541700: Macrophages

◢ SRX22541701: Macrophages

◢ SRX22541702: Macrophages

◢ SRX22541703: Macrophages

◢ SRX5007209: Macrophages

◢ SRX5007210: Macrophages

◢ SRX897073: Macrophages

◢ SRX9702016: Macrophages

◢ SRX9702017: Macrophages

◢ SRX9702018: Macrophages

◢ SRX9702019: Macrophages

◢ SRX9702020: Macrophages

◢ SRX9702021: Macrophages

◢ SRX9702022: Macrophages

◢ SRX9702023: Macrophages

◢ SRX1655669: Pro-B cells

◢ SRX1655670: Pro-B cells

◢ SRX1655671: Pro-B cells

◢ SRX1655672: Pro-B cells

◢ SRX1668641: Quadriceps Muscle

◢ SRX1668642: Quadriceps Muscle

◢ SRX1668643: Quadriceps Muscle

◢ SRX13365787: RAW 264.7

◢ SRX13365791: RAW 264.7

◢ SRX13365795: RAW 264.7

◢ Hdac3: STRING

Txndc11
Ilf3
Ankrd12
Sppl3
Hexa
Rcbtb1
Dph2
B4galt2
Atp6v0b
Kdm4c
Ube2q1
Chrnb2
Gns
Retreg2
Cnppd1
Slc23a3
Gnpda1
Slc35a5
Atg3
Ypel5
Atxn3
Hmgxb4
Atp6v0c
Amdhd2
Mfsd1
Sumo3
Zfp507
Zfp358
Mcoln1
Mtdh
Dnajc13
Supt4a
Aldh9a1
Trpm7
Ftl1
Bax
Atp6v1c1
Rragc
Zzz3
Lamp1
Pip4p1
Osgep
Apex1
Natd1
Aff4
Rcc1l
Gtf2ird2
Phf20
Marchf8
Afg3l1
Zfp607b
Hps5
Gtf2h1
Hsdl1
Dnaaf1
Crebrf
Pink1
Wee1
Creb3l3
Map2k2
Cc2d1b
Cdr2l
Igf2r
Pkd1
Dpysl2
Entpd4b
Entpd4
Tom1
Aspscr1
Naa25
Sf1
Dolk
Il31ra
Clcn7
Rfx1
Secisbp2l
Fbxl22
Klhl17
Plekhn1
Ncl
Spout1
Endog
Lipt2
Cluh
Hif1a
Pura
Adpgk
Gm51573
Yy1
Kdm4b
Ddx59
Stam2
Pibf1
Dis3
Rmnd1
Armt1
Elk4
Chrac1
Sumf1
Col11a2
Slc39a7
Rxrb
H2-Ke6
Ring1
Sirt7
Mafg
BC048403
Pycr1
Iba57
Nfkbil1
Ddx39b
Atp6v1g2
Nr1d2
Gdf1
Cers1
Hlcs
C1qbp
Radil
B4galt3
Ahsa2
Tada1
Nek7
Yeats2
Nrsn1
Slc30a5
Cd164
Hsp90aa1
Hexb
Tbcel
Rps19
Pdf
Nip7
Cog8
Map1lc3a
Fxn
Mycbp
Sdf4
B3galt6
Hnrnpl
Ing5
Dtymk
Dync1h1
Nfia
Atp5g3
Appbp2
Mthfr
Clcn6
Pdik1l
Cep85l
Nup210
Rbm39
Wipf2
Epn1
Rxylt1
Zfp292
Srrm2
Thap11
Nutf2
Cenpt
Ppp1r3e
Bcl2l2
Fam222a
Lrfn4
Rce1
Cerk
Zdhhc3
Exosc7
Foxo3
Zmiz2
H2az2
Cep131
Tdg
1190007I07Rik
Rpl14
Zbtb2
Dctpp1
Txndc12
Btf3l4
Zfp771
Eri1
Susd6
Eea1
Sspn
Rpl32
Irf2bp1
Pdpr
Desi2
4932438H23Rik
Serpina11
Tarsl2
Chmp6
Cyth2
Lsm6
Slc15a4
Il6st
H2bu2
Rnf187
Fam122a
Nphp3
Tmem198
Chpf
Trim39
Pdcd2
Tpt1
Deaf1
Btaf1
Fgfbp3
Tnpo1
Pi4kb
Kdm3b
Sft2d3
Btbd3
Ptbp1
Tgds
Rab24
Prelid1
Mxd3
Gpr180
Sub1
Cpe
Seh1l
Mllt11
Cdc42se1
P4hb
Arhgdia
Mios
Aff1
Trp53rkb
Nadk
Tpst2
Per2
Elovl5
Zfp24
Arrdc2
Eif4g2
Mfsd14a
Srsf4
Arl4a
Klf11
Klhl21
Josd1
Gtpbp1
Grasp
Mfsd13a
Tmem86a
Ttc3
Pigp
Colgalt1
Zfp628
Nat14
Gm36210
Srsf2
Mfsd11
Mettl23
Jmjd6
Kctd3
Tbc1d20
Tspan31
Marchf9
Cdk4
Spcs3
Ccdc9
Ift46
Arcn1
Ppp1ccb
Ppp1cc
Hes3
Sptan1
Wwp2
Cops7a
Slc25a25
Chd1l
Naif1
St3gal5
Uap1l1
Dpp7
Hnrnpab
Me2
Ing1
Cars2
Srfbp1
Unc119
Nae1
Car7
S1pr5
Kmt2c
Tmem116
Erp29
Keap1
Rpl35a
Lmln
Iqcg
Morc2a
Cln5
Phf7
Bap1
Srsf9
Greb1
Hps1
Sema7a
Ndst2
Srd5a1
Nsun2
Rasa1
Golga5
Mapk1
Vapa
Dag1
Ncor1
Pigl
Atf4
Rps19bp1
Tmem192
Kansl2
Smad2
Zfp367
Habp4
Ubac1
Sh2b3
Usp10
Knop1
Iqck
Pnpla8
Rb1cc1
Ncoa3
Matr3
Mark2
Snap29
Pi4ka
Rab5if
Col6a6
Ptprs
Birc6
Ifrd1
Phf20l1
Nuak1
Atxn7l1
Rmi2
Cspp1
Cops5
Srsf6
Fam219a
Dnaic1
Plekha1
Cep68
Tmem106b
Tcf3
Ss18
Pclo
Ppp2r5e
Stau2
Orai1
Lpcat1
Zfp653
Rnf103
Tmem42
Zfp710
Taf11
Anks1
Hnrnpa3
Commd3
Bmi1
Smurf2
Bicd2
Riox1
Tas1r1
Nol9
Snx8
Ptpn11
Tspan3
Cyld
Eif4g1
Tut7
Elf2
Fubp3
Pcid2
Cul4a
Tbc1d5
Zmat3
Cmpk1
Vps37b
Sephs1
Selenot
Ttc14
Spice1
Znrd2
Fam89b
Ehbp1l1
Wipi2
Ezh1
Cep126
Tmem11
Zbtb9
Rhob
Fam13b
Abhd12
Gins1
Taf4b
Eif3a
Cirbp
Fam174c
Dennd1a
Chn1
Dtnb
Efhd2
Pdpk1
Exoc5
Ap5m1
C330018D20Rik
Pcdh17
Ap5z1
Gm36028
Lrrc58
Trmo
Pcmtd1
Rab22a
Rab2a
Ncoa5
Zc3h7a
Fryl
Tmem64
Mif4gd
Pum1
Mrps7
Gga3
Dnaja1
Cog3
Slc25a12
Nr2f6
Dyrk3
Map4k5
Atl1
Fdx1
Trp53rka
Actg1
Ctsd
Atp6v1h
Wdr1
Zfp523
Slc35a1
Nin
Acot2
Heatr4
Vamp3
Trpc4ap
Rcc1
Casc3
Homer1
Idh2
Rae1
Amfr
Prkca
Tarbp1
Chka
Ppig
Siva1
Fam174a
Ell3
Serinc4
Serf2
Hypk
Mapk6
Snn
Fam104a
D11Wsu47e
Ran
Dpy19l4
Orai2
Atp2b1
Mfap3l
Scmh1
Fbxo4
Arhgap44
Bcl6
Enpp4
Zfand3
Mfsd5
Kpna4
Ssr1
Zfp219
Tmem253
Snx15
Sac3d1
Tm9sf3
Ankzf1
Ankib1
Krit1
Eif2b5
Bloc1s4
Ivns1abp
Stard3nl
Ten1
Acox1
Sdhaf1
Syne4
Ilkap
C2cd5
Mapk8
Dync2h1
Dcun1d5
Cdan1
Rmi1
Hnrnpk
Ambra1
Ppp2r5d
Vars
D17H6S56E-5
Serpinb6a
Ripk1
Fbxl4
Rad9a
Ppp1ca
Tbc1d10c
Prep
Pank2
Cbfa2t3
Gpr146
P2rx7
Herc1
Nrbp1
Gcfc2
Ythdc2
Spata25
Ctsa
Neurl2
Tbpl1
Sugp2
Armc6
Slc27a4
Trmt2a
Ranbp1
Mfn1
Wdr81
Gzmm
Rab6a
Cdc34
Arrb1
Afg3l2
Carnmt1
Dnajb4
Fubp1
Gabpa
Atp5j
Wdr82
Asf1a
Ccne2
Dpp8
Prmt3
Sem1
Stip1
Dnah7b
Fam102a
Lmtk2
Kctd20
Golga4
Etv3
Ksr1
Qsox2
Dyrk1a
Cnbp
Lactb
Arpc2
Rabggtb
Msh4
Adrm1
Tomt
Lamtor1
Anapc15
Rpsa
Prpf4b
Srrd
Hps4
Sgms1
Med28
Ndel1
Dcaf10
Myo7a
Ncbp2
0610012G03Rik
Uqcr11
Mbd3
Gng10
Uvrag
Egr1
Arl2
Tmem248
Gnpnat1
Zscan29
Tubgcp4
Lin7c
Ankrd54
Lcn2
Ptges2
Cep63
Anapc13
Rps8
Zdhhc20
Dym
Gdi2
Dld
Pradc1
Cct7
Egln2
Nepn
Gopc
Zfp668
Zfp646
Smarcd1
Asic1
Atrn
Smarca4
Suclg2
Snx13
Lrrfip2
Zbtb44
Aatf
Cbl
Ccdc153
Rp9
Unc45a
Hddc3
Bbs9
Plcg1
Bclaf1
Copb1
Snrpf
Lrp10
Hspa4
Ubald2
Rnf24
Atp1a1
Eml1
Lysmd2
Cry1
Unc5b
Akirin1
Smad1
Cacnb3
Atad5
Crlf3
Rbm6
Rbm15b
Manf
Gabarap
Phf23
Dvl2
Lgalsl
Kansl3
Fer1l5
Ywhab
Tmem260
Epn2
Stox2
Mmaa
Tmem250-ps
Pop7
Large1
Gigyf1
Acsl1
Slc6a6
Elf1
Ccny
Wbp4
Sec31a
Gga1
Camsap2
Clasp2
Gbe1
Myo9b
Haus8
Foxo1
Trim27
Ppm1b
Ell
Cnga4
Fam160a2
Mlst8
Caskin1
Rimbp3
Ube2l3
Tfdp1
Klc1
L3hypdh
Jkamp
Rps17
Kifbp
Cdk5r1
Pgs1
H4c14
H3c13
H2bc18
H3c15
H3c14
H2ac19
H2ac18
Gpcpd1
Mtmr1
Ptprn2
Cttnbp2nl
Sesn1
Dennd6a
Ccdc88a
Rbm17
Fam118a
Pcyt2
Hic2
Grik4
Ddi2
Smim14
Sart1
Gars
Tmem201
Nanos1
Zdhhc17
Xylt1
Plxnb2
Lysmd3
Jak1
Slitrk3
Pitpna
Wdr41
Micu2
Mettl24
Lbr
Sorbs1
Hmgb1
Vps36
Ckap2
Ccdc58
Fam162a
Trim37
Cnot2
Ibtk
Prelid3a
Magi1
Adgrl3
Taf10
Tpp1
Dyrk1b
Fbl
Rps6
Tmem219
Nrf1
Rsbn1l
Kctd13
Macir
Gapvd1
Gls
Fnbp4
Snx22
Ppib
Ggnbp2
Myo19
Pigw
Naf1
Cep135
AW549877
Slc7a5
Tmem125
Ddx20
Fam53b
Map2k4
Prr3
Abcf1
Gnl1
Lrp11
Igf1r
Phyhipl
Trim26
Tle1
Arih2
Fem1b
Sec62
Haus1
Atp5a1
Fnip1
Aldh5a1
Gpld1
Ptpn12
Lims1
Mon2
Btbd1
Srsf3
Cacybp
Arpp19
Hace1
Ier5
Slc30a9
Ip6k1
Slc25a51
Epc1
Zfp207
5730455P16Rik
Yipf4
Ttc9c
Hnrnpul2
Atr
1700065D16Rik
Tomm70a
1700066M21Rik
Guf1
Dffb
Cep104
Zranb2
Prrc2c
Flywch1
Tmpo
Maml1
Ubap2l
4933434E20Rik
1700094D03Rik
Washc5
Nsmce2
Map10
Eid1
Pskh1
Nrn1l
Zfp644
Qk
Fau
Tm7sf2
1810013L24Rik
Znhit2
Gpx4
Mrpl49
Uba6
Fbxl20
Cep78
Foxg1
Utp14b
Acsl3
Tmem229b
Xpo4
Rbpj
Scand1
Cnbd2
Slc9a8
Phf13
Srebf2
Wdr75
Thap3
Lrrc1
Puf60
Tprn
Tmem131l
Ssna1
Anapc2
Catspere2
Tmem203
Ndor1
Top1
Scaf8
Ift81
Zbtb25
Zbtb1
Ift88
Slc25a16
Zfp654
Cggbp1
Grhl1
Cd47
Actn4
Celf1
Gtf2a2
Schip1
Gramd4
A430005L14Rik
Acvr2a
Rnaseh2b
Btbd6
Ythdf2
Mtmr9
Pdk1
Rnft1
Timm50
Ctdp1
Usp34
Senp8
Myo9a
Slc35d1
Tlk2
Mapre1
Dll3
Zfp518b
Gpr62
Rchy1
Lifr
Arf1
Uchl3
Msi2
Dnajc1
Tstd2
Ncbp1
Twsg1
Trp53inp1
Rab3il1
Smg1
Srek1
Fut8
Tmcc3
Tef
Zbtb11
Rpl24
Otud3
Iars2
Bpnt1
Coprs
Nfyc
Tmed10
Arf3
Mef2a
Tjp1
Ldb1
Bpnt2
Dipk1b
Myt1l
Rsph3b
Flot2
Smyd1
Krcc1
Dhrs13
Rps20
Sap30
Yap1
Setd6
Sesn3
Mapt
Prr14
Kctd5
Fbrs
Irs2
Frmd6
Il6ra
Iffo2
Tmem245
Mob1a
Mthfd2
Zdhhc6
Vti1a
Ephb1
Reck
Snx18
Lrpprc
Nebl
Crtc1
Xpa
Vdac3
Dnaja4
Luzp1
Lypla1
Zfp428
Rras2
Kpna1
Akap10
Rnf44
Cdhr2
Tmem123
Btbd7
Spats2l
Dnmt3b
Dazap2
Raly
Llgl1
Exosc8
Alg5
Adar
Cacfd1
Slf1
2210408I21Rik
Aplp2
Ubr5
Pcgf6
Ptpdc1
Clcn4
Lrrc25
Ssbp4
Ccni
2010109A12Rik
Pdcd6ip
Ppp4r1
Kpna3
Rab31
Atp8a1
Rbfox3
Pofut2
Pabpc1
Snu13
Papss1
Sh3glb1
Atad2b
Ubxn2a
Shisa4
Exoc6b
Slc16a1
Adgrl1
Abca5
Tet3
Ylpm1
Ttll11
Csrnp2