ChIP-Atlas: Target genes

Potential target genes for Rai1

Query protein: Rai1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1745538 | Cortex
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rai1's Target genes

◢ Rai1: Average

◣ SRX1745538: Cortex

◢ SRX1745539: Cortex

◢ SRX8694178: Embryonic brains

◢ SRX8694179: Embryonic brains

◢ SRX8694180: Embryonic brains

◢ SRX8694181: Embryonic brains

◢ SRX8694182: Embryonic brains

◢ SRX8694183: Embryonic brains

◢ Rai1: STRING

Cldn34d
Twist2
Tex33
Axin2
Hbb-bs
Hbb-b1
Cwc22
Atxn7l3b
Hbb-bt
Hbb-b2
Plekhm2
Ankrd35
Npm2
Pcbp2
Ube2i
Wfdc13
Tardbp
Klhl9
1700093K21Rik
Npas4
Odf2l
1110004F10Rik
Usp14
9430069I07Rik
Hdhd2
Mrpl58
Thrap3
A2ml1
Luc7l
Mrpl48
Rbm25
Myl4
Cdc27
Mdfic
Crebbp
Psma2
Mrpl32
Eif4h
Zfp319
Usb1
Rwdd2b
Atp6v1g1
Trarg1
Rnf135
Txnl4a
Gm16286
Tmem125
Rab2a
Esp34
Rdh14
Glo1
Setmar
Atp6v0a1
Skp1
Atp5g2
Smim17
0610009B22Rik
Olfr394
Sdhaf2
Cpsf7
Zdhhc1
Dpys
Trdmt1
Hacd3
Olfr806
Olfr20
Srp54c
Srp54b
Srp54a
Ranbp2
Rmi1
Hnrnpk
Gm5591
Rbm12b1
Zbtb21
Atg4c
Taf8
Ccnd3
Rpgrip1l
Fto
Ric8b
Eif2s2
Dis3l
Zfp438
Krt84
Amfr
Vcp
Gm39773
Zfp112
Actr8
Tmem141
Fcna
Ccdc183
Pex7
Pskh1
Kat7
Ythdf2
Tbc1d32
Gosr1
Rab11b
Klk12
Fbxw5
C8g
Rpl19
Cacnb1
Srsf11
Lrrc40
Rbm7
Gm5617
Olfr1047
Zc3h18
Pank3
H4f16
H2aj
Capn7
Ube2l3
Glp2r
Nbr1
Brca1
Ibtk
Arl10
Cd81
Hps5
Gtf2h1
Nup214
Ammecr1l
Rnf14
Cnr1
Has3
Amz2
Elavl1
Mrps28
Cdip1
Psmd14
Rbbp6
S100a13
S100a1
Chtop
Cacng2
Hsd17b12
Mapk8ip3
Tcea1
Ubqln3
Snx4
Vamp3
Plaa
Fbxw4
Magoh
Smarcb1
Fam120b
Ythdf3
Exo1
Orc4
Mbd5
Zfp963
Zscan25
Tmem236
Psmc6
Prpf39
Nrd1
Akap8l
Nxf1
Hnrnpul1
Pink1
Trim27
Zfp87
Ube3a
Actr3
Amn1
Pja2
Cnbp
Hps6
Armh3
Zfp866
Psmd12
Fam98b
Oxsm
Ngly1
Zmat5
Uqcr10
Psma3
Pafah1b1
Hnrnph1
Dhx30
Utp11
Nupl2
Smu1
Sod1
Sugp1
Mau2
Ccdc62
Pura
Clk3
Prcc
Tax1bp1
Ola1
Rnf8
Supt6
Sdf2
Tnpo1
H2bu2
Clpx
Hectd1
Pdcd6ip
Zdhhc20
Mlf2
Asb12
Sufu
Actr1a
Ambra1
Mcl1
Mib1
Slc30a5
Rptor
Stk16
Glb1l
Mavs
Sf3a1
Ccdc157
Ncl
Sike1
Sik2
Smarce1
Plpp7
Ssr3
Agtr1a
Sharpin
Maf1
Gm35339
Mettl25
Ccdc59
Stx18
Nalcn
Serinc1
Exoc6b
Nudt19
Sun1
Tmprss5
Sf3a2
Plekhj1
Tdrd3
Dennd6a
Gm3448
Gm3417
9030025P20Rik
Il31ra
Napepld
Lcmt2
Adal
Olfr608
Olfr607
Ly75
Tm2d1
Mkln1
Uqcrc2
Psg23
Usp5
Cdca3
Btbd9
Napa
Itgb1
Pdcd6
Pfn4
Fam228b
Abhd6
Usp47
Dennd10
Slc25a36
Cox14
Tbce
Med23
Prmt6
Mtpn
Mfn2
Leng8
Zyg11b
Crtc2
Clk1
Pttg1ip
Ptrhd1
Cenpo
Folr2
Zmynd11
Gdap1
Glra1
Zfp12
Psma1
Tmem175
Gak
Trim41
Qtrt2
Ccdc191
Btrc
Endov
Mff
Wdr34
Patj
Kdm3b
1810013L24Rik
Tmem17
Thap3
Tmem88
Naa38
Cyb5d1
Hnrnpll
Dele1
Ubr3
Vdac1
Dzip3
Cip2a
Fam174a
Eef1akmt2
Eral1
Sf3b1
Zfp74
Top2b
Dnm1l
Ndel1
Oxnad1
Dph3
Hipk3
Recql4
Lrrc14
Tusc3
Bclaf1
Mdm4
Ccser2
Sf1
Casd1
Fancd2os
Brk1
Smndc1
Zdhhc21
Rock1
Rcn2
Psmd7
Tor1aip2
Tor1aip1
Rabl6
Zfp868
Gpr75
Khdc4
Btnl1
Galnt11
Polr2m
Rps29
Naa30
Vps26b
Ncapd3
Trit1
Hnrnpm
Ndufb2
9430015G10Rik
Lysmd4
Rbp2
Atp5g3
Rnf138
Gm10509
Mlh1
Epm2aip1
Dcaf5
Ube2o
Sem1
Col8a2
Phrf1
Lrrc55
Vps4a
Scaf8
Nup205
Ddx50
Tspyl1
Saraf
Mgrn1
Rbsn
Copb1
Iba57
Ndufa8
Morn5
Cherp
Map4k5
Atl1
Dennd4c
Ogfr
Sltm
Srsf6
Trmt1
Nacc1
Gdf3
Ythdc1
Rab18
Rpl27a
Mrps26
Api5
Larp1
Sugct
Mplkip
Trak2
Snrpd1
Tmem67
Rbm12b2
Nek4
Ipo7
Far2
Ubxn8
Gnpat
2810004N23Rik
Nenf
Aadacl4fm2
Pitpna
Rab3a
Trrap
Zcchc7
Tarbp2
Map3k12
Calr3
1700030K09Rik
Rraga
Smarcad1
Olfr464
Psph
Cct6a
Olfr282
Trim44
Zfp871
Nckipsd
Zkscan8
Pomp
Defb23
Slfnl1
Zfp26
Tcp1
Mrpl18
Ssrp1
P2rx3
Zfp606
Gnas
Gpd2
Cbll1
Ttc21b
Tmem43
Chchd4
Anapc4
Gne
Lins1
Fbxo21
Eif2ak4
Srebf1
Nepro
Kcnj16
Cd300e
Xpo5
Polh
Bnip3
Rbm39
Entpd7
Setd5
Zfp637
Tmem135
Sugp2
Armc6
Ankrd17
Ubn2
Cwc27
Gm3435
Eaf2
Iqcb1
Pdia3
Catsper2
Kdm4c
Mtdh
Sp2
Pfn1
Eno3
Rab11fip2
Tekt3
Atp6v0a2
Rps23
1700066M21Rik
Arf4
Rnf10
Vapb
Opa1
Crppa
Tmem33
Fth1
Borcs7
Mrpl17
Zfp821
Ist1
Rbm6
Akr1b3
Trmt10a
Mttp
Snw1
Rab5b
Spag6
Anapc10
Abce1
Smim11
Gm33989
Npepps
Caml
Yipf4
Gpr89
Got2
Ube2d3
Capns1
Scamp2
Zfp263
Mettl9
Psmb2
Hdac4
Afg3l1
Cfap20
Shox2
Arsg
Serp1
Eif2a
Zfp607b
Map3k10
Snx17
Eif2b4
Rsrc1
U2surp
Lrrc51
Mtpap
Ldah
Ttc9c
Hnrnpul2
Myadm
Nfx1
Zfp869
Schip1
Sod2
Lrrc58
Pcmt1
Lats1
Atp5b
Prkacb
Ubap1
Rlbp1
Fanci
Wbp11
BC049715
Ifi47
Rab11fip5
Septin2
Hdlbp
Cycs
Wdr41
Ccnt1
4930415O20Rik
Ep400
9530077C05Rik
Cd68
Safb2
Safb
Zfp358
Pan3
Hnrnpa0
Snrpe
Brd3
Usp39
0610030E20Rik
Zfyve27
Rpl14
Pgap4
Hsf1
Bop1
Ankle2
Inpp1
Nfkbia
Rbm27
Rbm18
Mrrf
Atp6v1c1
Exosc3
Rbl2
Pcna
Sdad1
Dock7
Usp24
Actb
Zfp148
Wdr43
Aarsd1
Gtf3c4
Canx
Tpra1
Mcm2
Tdrd7
5031439G07Rik
Prox2
Dlst
Map3k3
Eif3e
Uqcrh
Lrrc41
Slc45a1
G3bp2
Tspyl5
Slc25a3
Reep3
Rplp0
Wasf3
Gyg
Dph6
Epc1
Pdcd7
Nfxl1
Tmem79
Smg5
Pkd1
Thumpd1
Ccnt2
Mynn
Actrt3
Ccnl2
Gps2
Tmem70
Tubd1
Rps6kb1
Elp1
Abitram
Hexim2
Aco1
Vps13c
Fam122a
Gpam
Bmt2
Rnmt
Fam210a
Prorp
Stx16
Slc5a5
Rpl18a
Dyrk1a
Rp9
Chd1l
Sec16a
Lsm2
Med17
Ddx6
Gpx7
Zfp689
Ccar1
Mbd3
Washc3
Mkrn1
Rai1
Rbm22
Fam76b
Cep57
Pxmp4
Syde1
Fhit
Lrrc57
Haus2
Setd7
H4c2
H4c1
H3c1
H1f1
Sqor
Med15
Cops3
Rps15
Apc2
Dhx15
Exoc2
Arl5a
Arl14ep
BC048403
Drap1
AI837181
Pmm1
Pebp1
Rc3h1
Inpp5b
Zdhhc13
Oxa1l
Smim10l1
Rrp1
Pdss2
Utp3
Pak2
Phf5a
Aco2
Zfp68
A430033K04Rik
Tlk2
Tm9sf2
Ptpn23
Ddx23
Aatf
Tet3
Ppme1
C2cd3
Fus
Fam168a
Ppp5c
Gga2
Alad
Atp9b
Rfx7
Ncor2
Dnajb6
Rft1
Dnajb9
Rplp1
4932438A13Rik
Hspa4
Narf
Herpud2
Larp4
Pcm1
Fam193a
Uchl5
Ro60
Mtarc2
Tmx4
Pcbp1
Maml3
Hspa8
Zzef1
Cyb5d2
Zc3h6
Ipmk
Cisd1
Rangap1
Srprb
Pcyox1l
Tmbim6
Dennd4a
2700097O09Rik
Surf4
Stkld1
Mapk9
Rplp2
Pidd1
Herpud1
Gins1
Abhd12
Ier3ip1
Hspe1
Hspd1
Dusp11
Tia1
Hps3
Xrn2
Idh3a
Imp3
Mvk
Mmab
Lmbr1
Washc1
1700031F05Rik
Kif5b
Cep83
Trmo
Suco
Lman2
Phf7
Bap1
Irx2
Mob4
Vmn2r82
Pnpla8
Fbxl5
Slc22a5
Dtwd2
Smap1
Dnaja2
Csnk1d
Zfp157
Pum2
Accsl
Aplp1
Glg1
Sel1l
Stard3nl
Agbl3
Zbtb11
Cnot1
Kcmf1
Itprid2
Iqce
Brat1
Mapre2
Zfp638
Whamm
Fsd2
Card19
Crk
Slf2
Rhot1
Rragc
Zfp334
Tdg
Phkb
Itfg1
Krba1
Actr5
Uxs1
Rccd1
Stambpl1
Peli1
Vps37a
Cnot7
Pgp
Bricd5
Zbp1
Rap1b
Paip2
Setx
Qrich1
Triqk
Stx5a
1700092M07Rik
Mansc4
Klhl42
Ice2
Katnbl1
Bub3
Arl8a
Zfp113
Nup153
Klhl24
Iqsec3
Mrps15
Pusl1
Acap3
Srsf4
Pnisr
Tent2
Eef1a1
Itpa
Ddrgk1
Zbtb8os
Rbbp4
Ankrd13c
Rtl6
Tmem115
Tnfaip8l1
Eif4g2
Slc35d1
Lypla1
Tomt
Lamtor1
Arnt
Acbd5
Clpp
Txn1
Fastkd1
Txndc15
Ppig
Vps51
Tmem262
Atp5l
Arhgap39
Tra2b
Arhgef7
Adar
Pkm
Ptdss1
Mterf3
Tmx3
Birc6
Pef1
Ift52
Rab28
Arl2
Zfp592
Atl3
Brwd1
Rps13
Vps35
Fam32a
Sap130
Fbxl4
Ncoa4
H13
Gatd1
Akr1a1
Ccdc50
Cc2d1a
4930432K21Rik
Scfd2
Fip1l1
Raf1
Lyrm1
Dcun1d3
Urgcp
Psmb5
Atxn2
Ahcyl1
Uqcrq
Gdf9
Pik3ca
Agfg1
Med21
Gmps
Erc1
Psap
Ankzf1
Vmn2r105
Olfr822
Tmem231
Ccnl1
Atp6v0e2
Ces1d
Lipo2
Smarcc1
Setd1a
Mfsd14a
Spg20
Dynlrb1
Rab30
Ap1m1
H3c15
H3c14
H2ac19
H2ac18
Zfyve9
Dcaf11
Tomm20
Rnf215
Zfp386
Ccny
Ypel5
Pnn
Rsl1d1
Dgke
Sde2
Suz12
Ndufa10
Usp22
Cox5a
Hif1a
Cdadc1
Vstm2l
Ddx42
Ccdc47
Pced1a
Nacad
Ptpn2
Tex10
Eri3
Rpl30
Pla2g15
Cox6c
Zfp943
Zfp942
Gtpbp8
Sesn1
Upf1
Stk25
Snrpa1
Clk4
BC049762
Wtap
Poc1b
Galnt4
Zfp251
Cog2
Bphl
Cndp2
Cdkn2c
Rtcb
Ilkap
Zfp398
Pcid2
Cul4a
Zfp655
Son
Gm36712
Gart
Inpp5f
Tmed10
Manbal
Glyctk
Cntrl
Hint1
Med11
Kpna6
Nupl1
Xkr7
Kifap3
Crtc3
Actr1b
4933424G06Rik
Osgin2
Tomm70a
Tnks2
Cibar1
Twf1
Scarb2
Malsu1
Ccdc90b
Drg1