ChIP-Atlas: Target genes

Potential target genes for Rai1

Query protein: Rai1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8694180 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rai1's Target genes

◢ Rai1: Average

◢ SRX1745538: Cortex

◢ SRX1745539: Cortex

◢ SRX8694178: Embryonic brains

◢ SRX8694179: Embryonic brains

◣ SRX8694180: Embryonic brains

◢ SRX8694181: Embryonic brains

◢ SRX8694182: Embryonic brains

◢ SRX8694183: Embryonic brains

◢ Rai1: STRING

Sorbs1
Gm51573
Sfi1
Gmeb2
Ddx39b
Impa2
1700071K01Rik
Herc2
Tomm20
Nkap
Tmem115
Slc22a3
Col9a3
Rpl14
Ehbp1
Scoc
Eif5
Hoxa2
Wdr20
Mrpl52
Mmp14
Pip4p1
Lgmn
Ski
Zfp638
Tent2
Strn3
Ap4s1
Ptpn12
Rab43
Tmem267
Fsd1l
Etv3
Jazf1
Msl2
Klhl14
4930426D05Rik
B230219D22Rik
Birc6
Rab5if
Plcl1
Msh4
Naa20
Trim13
Tmem210
Lrrc26
Tuba1b
Rps17
Clstn2
Tnpo1
Tmem88
Naa38
Cyb5d1
Siah1b
C1qbp
Btaf1
Gpam
Alas1
Tusc2
Abtb2
Tmem125
Shox2
Fbxl19
Tox
Smad6
Zfp52
Rnf26
Olig1
Itga3
Rptor
Wdfy3
Osbpl2
Slc26a8
Mapk14
Fgfr2
Btbd17
Gm4846
Card19
Hmgxb4
Lsm14a
Zdhhc6
Vti1a
Atp5g3
Ppig
Kcng2
Rbm15b
Klc1
Gtf2a2
Rrs1
Adhfe1
Mtmr14
Macrod1
Tmem123
Runx1
Slc25a42
Tnpo2
Cep131
Prkaa2
Ppl
Nphp3
Gfi1
Fam71a
Spindoc
Tbcel
Slc6a7
Sertad2
Specc1l
Fbxw4
Ube2s
Dlgap1
Tbx4
Kcnmb2
Baz1a
Serp1
Eif2a
Slc4a8
Pgm5
Kcnh4
Hcrt
Fgf2
Enpp1
Pum1
Crk
Uimc1
Lyrm2
Wwtr1
Gsx2
Ezh1
Papss2
Homer1
Map2k2
Arhgap44
Kbtbd8
Phyhipl
Lrrn1
Peli2
Trabd2b
Txndc9
Eif5b
Runx2
Ism1
Chn2
Acvr2a
Srp14
Fam217a
Zbtb44
Srm
Ddx59
Specc1
Frmd6
Csmd1
Hoxb8
Hoxb7
Dnaja4
Nr2e1
Gm11213
Tmem135
Fubp1
Dnajb4
Dym
Pdss1
Epha7
Wwc1
Lypd1
Abhd17a
Rab1a
Evi5
Dennd5a
Morc3
Coro1c
Chst2
Zc3hav1l
Wnt11
Ttc14
Gm1979
E2f1
Zbtb45
Tbc1d20
Ppp1r9b
Slc35e3
Mamld1
Ltbp4
Ky
Fam89a
Zfp358
Slc35a1
Ppp1r12a
Spire2
Ablim1
Mcoln1
Kcne2
Elavl1
Rpsa
Ppp2r5a
Phf20
Cpe
Sap30
Tnfaip2
Mrpl33
Mfsd13b
Lats2
Gpr88
Cib2
Cdr2
Srf
Btbd1
Mindy2
Nxf1
Eif3a
Haus1
Atp5a1
Rab22a
Cnnm3
Zbtb38
AI593442
Csf1
Kctd5
Hmga2
Ccna2
Abtb1
Arfgef1
Rpl31
Elmod2
Ccnyl1
Fmnl1
Rnf220
Papolb
Il31ra
Brd1
Arf3
Lmtk2
Pikfyve
Idh1
Shisa4
Prkca
Erbb4
Dleu7
Gm4981
Dux
Cacul1
Tbca
Scmh1
Stip1
Tmem178
Srfbp1
Snap91
Uvrag
Fubp3
F8a
Dgki
2300009A05Rik
Kcnt1
Fbxo42
Pkp4
Ccdc148
Ube2r2
Sh3gl1
Chaf1a
Nfat5
Stk40
Jag2
Prdm4
Il6ra
Galnt9
Uhmk1
Arcn1
Pigl
Ncor1
Pcmtd1
Glrx2
Tmcc3
Ntm
Herc3
Slc10a4
Pgrmc2
Mfsd14a
Esyt2
Sap18b
Sap18
Pwwp3a
Sybu
Ppm1d
Samd10
Prpf6
Smox
Cdc5l
Taf4b
Slc16a3
Shisa2
Igfbp7
Dzip1
Atp1b1
Srsf6
Fbxl14
Abi2
Fbrsl1
Qsox2
Coq9
Ciapin1
Slitrk5
Tsr1
Sgsm2
Stim2
Fbl
Cav2
Slc15a4
D030056L22Rik
Sycp1
Loxhd1
Hjv
Dnajc25
Ube2w
Rfxap
Abca5
Rae1
Exoc5
Ap5m1
Efr3b
Naglu
Camk1d
Arl4c
Slc35d3
Notum
Kdm3b
Mpc2
Dcaf6
Sacm1l
Tcte2
Trim24
Slc35a3
Uba52
Rex1bd
Noct
Csrnp2
Magi3
Osbpl10
Plekhh3
Ccr10
Pou3f3
Lrp10
Fem1al
Cntnap1
Cdkn2a
Prrc2c
Phc2
Secisbp2l
Phax
Aldh7a1
Pde8b
Iqsec1
Zfp786
Wdr75
Tmem132e
Ppp1r26
Dact1
Uri1
Mpdz
Arl8b
Map2k5
Egln2
Unc13b
Pam
Ltk
Bclaf1
Ppp3cb
Rgl1
Iars2
Bpnt1
Ip6k1
Sema4f
Arhgef12
Paip2b
Fam13b
Crlf3
Nudt9
Klf7
Adad1
App
Kdm5b
Tprgl
Irs2
Unc5b
Pim1
Lhfpl4
Hoxd1
Sult4a1
Chuk
Xpo4
Ppp1ccb
Cnih4
Elovl5
2210016F16Rik
Mllt11
Lrrc32
Cdc42se1
Ccdc194
Acads
Reep3
Pdik1l
Frs2
D5Ertd579e
Slc25a33
Srrd
Hps4
Plcb4
Nomo1
Atp1b2
Abcc6
Nenf
Tlk2
Pitpna
Ica1
Uhrf2
Atxn2l
Tmem158
Slc9a8
Nde1
Marf1
Ap1b1
Mideas
Hectd2
Zc3h15
Ralgps2
Cd47
Txndc5
Ier5
Abcc8
Reck
Nanos2
Mypop
Fam53b
Foxp1
Ldb1
Nefh
Pth1r
Washc1
Stk35
Opn3
Chml
Mlf2
Vps4a
Kifbp
Atp6v1h
Arl2bp
Cfl2
Tgds
Gpr180
Dmxl1
Ddhd2
Il6st
Slc4a7
B4galt4
Spg7
Pank2
Celsr2
Kcnk2
Tcf3
Tex12
Tac4
Med13l
Gbx2
Cdx2
Cdc20b
Bag2
Srsf10
Tfap2c
Lamc2
Gdf7
Esr1
Ube2i
Osgin2
B3galnt1
Ptpmt1
Rpl35
Arpc5l
Wasf1
Cdc40
Patl1
Rps19
Gnai2
Ndfip2
Srd5a1
Rps3a1
Nsun2
Foxi3
Ccser2
Wnk2
Zfp654
Cggbp1
Gskip
Atg2b
Lrfn4
Plekha8
Fkbp14
Htt
P3h4
Fkbp10
Syndig1
Rassf10
Lepr
Cnn3
Arih1
Hspa4
Hnrnpf
Tbc1d15
Focad
Gm20346
Anp32a
Ero1a
Slc4a4
Slc39a13
Usp25
Mmp17
Suclg2
Sez6
Plekhg3
Slc30a5
Chd1l
Ugcg
Ahcyl2
Wapl
Zfp280d
Prrc2b
5730455P16Rik
Sema4b
Lacc1
Hs3st2
Hoxa4
Dpf1
Ccdc122
Bmf
Ppp1r14c
Irf2bp2
Arf6
Coro2b
Barx1
Rp9
Ube2q2
Socs5
Mrps30
Gas6
Aebp2
Arhgap20
Ccdc71l
Marchf8
Prrc2a
Tacc2
Mcrip2
Klf3
Frrs1l
Acbd6
Rnaset2b
Rnaset2a
Ptgr2
Camk4
Ube2a
Tcf7l2
Ryr3
Ptprz1
Ptgfrn
Gjd2
Bcar3
Mast4
Zbtb21
Ndufa10
Slc7a13
Tprkb
Nat8f1
Lipt2
Brf1
Parp1
Btbd6
Tmc7
Acot4
Tmem165
Fam160a1
Synj1
Tvp23a
Sclt1
Samd4
Mest
Hsd11b2
Gm13090
Gdf10
D3Ertd751e
Car8
Bmp2k
B3glct
Acot6
Tmem229b
Sesn3
Trim7
D430041D05Rik
Zxdb
Dlx6
Dennd6a
Guf1
Ets2
Galnt7
Lims1
Ascc3
Fam214a
Zfp867
Lonp1
Catsperd
Herc1
Cavin3
Adap1
Ctu1
Kdm4b
Zfp800
Skida1
Ube2j2
Ypel3
Tbx6
Rmi2
Nxn
Met
Lrrc1
Isoc1
Iqcf5
Garem1
Hspe1
Hspd1
Ints8
Atp9a
Nupr1l
Lsm6
Ipo11
Grik4
Prkci
Magi1
Klf14
Atp2c2
Asic2
Ube3a
Fbxl3
Rb1cc1
Mtx2
Camkk2
Snta1
Pou3f1
Fryl
Rsbn1
2510009E07Rik
Cspp1
Cops5
Snap29
Pi4ka
Trim33
Tmem62
Tcf12
Gars
Large1
Sun2
Rundc3b
Isyna1
Ephb1
Xylt1
Vax2
Susd5
Slc9a3r2
Slc25a25
Nebl
Naif1
Lrrfip2
Isl1
Cachd1
Cnr1
Trpc4ap
Zfp422
Ptpn9
Bnip2
Rims1
Pclo
Nptx2
Cpeb1
Tomm70a
Ckap5
Tspan3
Smg1
Zfp598
Polr3e
Evl
Tmem8b
Fam221b
Gid4
Gpbp1
Pgr
Rps8
Tmem268
Kcnn2
Zfp575
Tsc22d1
Rgs12
Mki67
Ethe1
Barhl1
Asah1
Lrp6
Tnrc6a
Scaf4
Naa25
Ppp2r3a
Zxdc
Ss18l1
Psma7
Lin7c
Trmt2a
Ranbp1
Ccm2
Prdm2
Spcs3
Tnks
Spata5l1
Sema7a
Twf2
Ppm1m
Pms1
Ormdl1
Rab6b
Slco3a1
Tab3
Trp53rka
Sh3rf1
Efcc1
Urod
Tspan17
Tcf23
Sox1
Hoxc9
Hectd3
Dclk3
Phlpp1
Foxf2
2810459M11Rik
Rc3h1
Lrrc58
Coq2
Chchd6
Zmym5
Stat5b
Spg21
Tnk2
Ranbp17
Rnf24
Asnsd1
Asdurf
Abl1
Hmgxb3
Ankrd9
Snai3
Sh3d19
Prr5
Piezo1
Nkx2-4
Nfib
Nfatc2
Mtfr1
Igfbpl1
Fnbp1
Carnmt1
Bhlhe41
Tmem11
Spast
Gpr25
Mcur1
AA414768
Cldn34d
Slf1
2210408I21Rik
Cpsf6
Zfp622
Kcnma1
Slc7a5
Amer2
Rala
Rap2b
Isca1
Gpr63
Kctd1
Slc39a11
Cog1
Spata5
Nudt6
Pde10a
Optc
Hsf5
Grasp
Fbln1
Foxj2
Rabgap1l
Lmln
Ptprm
Tnrc18
Mapkapk5
Hoxd8
Gsx1
Gstt1
Fam3c
Bean1
Msh6
Nek9
Fbrs
P3h1
AU022252
Gdi2
Arid1a
Nptxr
Spata18
Sgcb
Pdp1
Casc3
Tssk3
Odc1
Mael
Fam229a
Vcp
Setd2
Rgmb
Maml1
Usp13
Map9
Atad2b
Slc36a4
Dpp8
Rad54l2
Amigo1
Eid1
Pard3
Ddost
Dcakd
Zfp385b
Ralbp1
Rcn1
Sri
Myo5b
Col27a1
Cdca7l
Tnks2
Kansl1
Slc30a1
Usp34
Fem1c
Wnk1
A430005L14Rik
Snx25
Pbx3
Fgf18
Epc2
Chd6
Ccdc102a
Cacna2d3
Pja2
Cbl
Vezt
Fgd6
Dagla
E130309D02Rik
Ttc3
Slc16a1
Pigp
Errfi1
Prxl2c
Tmem248
Ccng2
Tomm40
Sptb
Zfp609
Mmp1a
Zfyve28
Cfap99
Wt1
St8sia6
Smtnl2
Rest
Pld5
Pdzd2
Nt5m
Ephb3
Atr
1700065D16Rik
Pskh1
Wdr41
Smap1
Ccni
2010109A12Rik
Rbm17
Ado
Rbfox2
Gpr146
Pard6b
Plec
Ube2z
Pik3cd
Arnt2
Eri1
Txnrd3
Rbms1
Pkmyt1
Htr1d
Fignl2
Efna4
Adamts8
1700001C19Rik
Tbx1
Spen
Npas3
4933428G20Rik
Rpl17
Fbxo4
Mier1
Kmt5b
Rras2
Rmdn3
Lbr
Fam184a
Apbb2
Slc30a9
Zdhhc2
Raph1
Elmo1
Zbtb7c
Suox
St6galnac2
Sfrp2
Prrx2
Notch1
Nectin3
Hoxd13
Ggta1
Foxe3
Aggf1
Actl10
1700003F12Rik
Pitx3
Gbf1
Gpx4
Hif1a
Ldlrad4
Fnip1
Nck2
Znrf1
Smurf2
Smim4
Nt5dc2
Ccnj
Fam189a1
Aspdh
Lrrc8a
LOC547349
H2-L
H2-D1
Rbfox3
Smarca2
Rffl
Stox1
Slc37a1
Hs6st3
Cebpd
Bcl2l11
Atrn
C1ql1
Cdc16
Sox10
Pou3f2
Mccc2
Cebpa
Dnm1l
Ythdc1
Cyld
Rhob
Arl4a
Tmem106b
Stox2
Zmat3
Srsf2
Mfsd11
Tapt1
Klhl21
Mapk8
Skil
Plxdc1
Marcks
Tlnrd1
Mesd
Hlcs
Ddx43
Cpne2
Ube2l3
Pkd1
Pcmt1
Lats1
Dock7
Hcn3
Gm45927
Clk2
Ube2n
Rap1gap
Fbxo30