ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21482114 | Ganglion cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◣ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Tal2
Ms4a10
Kcng3
Slc10a7
Rbmxl1
Dph1
Rtn4rl1
Dhx32
2610528J11Rik
Aqr
Gpn1
Zfp980
Slc45a3
Rspry1
Psme3ip1
Zfp979
Wdr89
Pmvk
Phc2
Zfp600
Polr3k
Stk11ip
Rhof
Fam50b
Neurog1
Otop1
Cryba2
Zbtb8a
Cbx4
Snrpn
Snurf
Thap4
Frzb
Il18
Bco2
Anp32e
Homer3
Kpna1
Pou5f1
Zfp623
Mplkip
Vkorc1l1
Lin28a
Mindy4
Epb41l5
Tac4
Sacs
Dnmt3a
Slc16a3
Zfp960
Cyp51
Prmt1
Lrtm2
Gpx4
Zfp658
Syce3
Sash1
Stk38
Gdf5
Fgf6
Sox2
Ttc41
Hsp90b1
Rabl3
Gtf2e1
Khsrp
Myo10
Calr3
1700030K09Rik
Klf2
Esrrg
Optc
Alpl
Phc1
Lypla1
Trh
Scaf4
Tmem154
Clec12a
Foxd4
Ccdc194
Sfxn1
Myh9
Hsbp1
Mbtps2
Usp37
Plcd4
Mrpl28
Rex2
Pcyt1b
Nifk
Setx
Tomm20
Irgm2
Plekhg1
Lrrc2
Tdgf1
Chek2
Kat7
Ell2
Zfp219
Pdgfra
Nfkbiz
Ccno
Lrrn2
Nanog
Fgf15
Prex1
Ifitm1
Etfbkmt
Fzd8
Ear10
Abcf2
Fam25c
Mtch1
Surf6
Mllt6
Tmem218
Cxxc5
Zcrb1
Pphln1
Gpr1
Lima1
Rps19
Shmt2
Zmym4
Polr2e
Myd88
Acaa1a
Tmem143
Syngr4
Abca4
Car14
Slc2a1
Prcc
Trim2
Sap30bp
Recql5
Itga5
Sgk1
Zfp180
Dmtn
Ppp2r2d
Mapk1ip1
Fsbp
Ska2
Prr11
Jakmip1
6720489N17Rik
Rab43
Mmut
Cenpq
Virma
Gba
Plch2
Nrf1
Trp73
Lce6a
Zfp972
H2-Ke6
Ring1
Gm3604
Zyg11b
Zfp9
Ncoa2
Hip1
Gm5165
Zfp574
Grik5
Ing2
Eif5a2
BC107364
Srek1
Phyhd1
Sfi1
Sufu
Actr1a
Ifrd2
Soat1
Gse1
Gtf2ird1
Rif1
Cotl1
Mcf2
Tstd1
Tspan9
Tma7
Ccdc51
A930007A09Rik
Fgf5
Nfkb1
Dhrs7b
Tmeff1
Otud7a
Gpc6
Fgl2
Ccm2
Zfp605
Gtpbp6
Shroom3
Prss30
Zfp791
Cdk5r2
Prickle1
Odaph
N4bp2l2
Epp13
G6pc2
Cdh1
Casq2
Tgfb3
Ift43
Epop
Galnt16
Zfp97
Ptrhd1
Cenpo
Pla2r1
Nufip2
Arhgap32
Ogn
Kctd7
Fgfr2
Lrrc4c
Sulf1
Mtf2
Med16
Txlng
Bcl9l
Eif1ad
Banf1
Podxl
Magi1
Ypel2
Trim35
Zfp386
Itgb8
Foxa1
Rpl22
Vrtn
Hvcn1
Cpsf6
Pifo
Poc5
Psmb8
Id3
Wnt7b
Tef
Zfp622
Fabp12
Rbm44
Calml4
Irgm1
Tmem88
Naa38
Cyb5d1
Zfp36l1
Supt6
Sdf2
Zfp946
Slc35b1
Cox7a2l
Cldn34d
Adgrv1
Mrps28
Raet1e
Raet1a
Tcf7l1
Hs6st1
Trpm7
Trim33
Mdm4
Ctdsp1
Alg8
Npcd
Cbx6
Pkdcc
Zfp985
Uqcrq
Gdf9
Arhgef26
Slc19a3
BC052040
Inppl1
Men1
Ephx2
Slc7a3
Sall4
Gm3411
Heatr1
Cybb
Lmln
Tnrc6b
Ctxn2
Olfr995
Tprgl
Rps23rg1
Znfx1
Ppp1r1a
Cwc25
Dlx1
Os9
Xxylt1
Lclat1
Prrx1
Fzd10
Oas1g
Tbc1d5
Pklr
Ramp2
Kdm2b
Pcdhgc5
Pcdhgc4
Rgs22
Polr3b
D7Ertd443e
Riok2
Tmem125
Vps8
Btbd17
Gpr142
Dusp6
Sox12
Zfp729a
Hk1
Smim7
Snx11
Rere
Gm38396
Anxa11
Banp
Car5a
Pik3r4
Rfx4
Nipbl
Pnpla6
Qser1
Cep170b
Fxn
Mthfs
Zfp871
Qrich1
Ccnd2
Sdhb
Olfr1358
Zkscan5
Zkscan14
Ccn2
Smim26
Olfr1312
Gm51425
Rcn3
Zscan22
Klf16
Nkx3-1
Mettl15
Kif18a
Tigd2
Lhx9
Irf2bpl
Fgd4
Fgf4
Dusp4
Barhl1
H2aj
H4f16
Marchf9
Ctcf
Parp10
Grina
Camk2n1
Rnf32
Imp4
Ccdc115
Mettl3
Gja1
Crb2
Sall2
Lsm4
Otub2
Dnah3
Add1
Tmem159
Septin4
Hspa9
Pip4k2a
Arfip1
Drosha
6030458C11Rik
Ppp1r16b
Pigo
Vmn2r12
Tob2
Porcn
Miga1
Cngb1
Tepp
Zfp317
Prtg
Thyn1
Acad8
Pitx2
Kcnmb2
Ssbp3
Olfr806
2810021J22Rik
Idh1
Cstf3
Pikfyve
Yipf1
Lta4h
Hnrnph2
Gla
Igsf10
Prr19
Pafah1b3
Mis18bp1
Armcx1
Plxdc1
Mcl1
Cep120
Efs
Plin3
Stk35
Tomm7
Ube2h
Npc1
Rpusd1
Chtf18
Rdh12
Cdan1
Npepps
Rbbp7
Sh3bp4
Enpp3
Caprin2
Srsf11
Lrrc40
Slc39a14
Smim19
Slc20a2
Gbx2
Mars1
Tjp2
Ldlrap1
Cdiptos
Cdipt
Duxbl3
Duxbl2
Duxbl1
Mecp2
Nupl1
B4galt1
Oscar
Ndufa3
Phf23
Gabarap
Dvl2
Bcar3
Lrp2
Ptpn4
Slc36a3
Pex14
Thoc3
Prdm10
Map3k12
Sft2d1
Usp3
Tarbp2
Sobp
Epb41l1
Hnrnph1
Med6
Alad
P2rx7
Tmem255b
Grasp
Slc38a9
Coq8a
Emc7
Cdyl
Ccz1
Dcaf12
D1Pas1
Prss48
Sp2
Rnf157
Pax6
Cd14
Tmco6
Gbp6
Arnt
Dennd2a
Bod1l
Pfkfb4
Serinc5
Cux2
Hsd11b2
Gng2
Nectin1
Gm3558
Rrs1
Adhfe1
Gnmt
Glrx2
Igfbp2
Slc44a5
Zfp36
Ubxn6
Hdgfl2
C1qtnf12
Akr1e1
Pla2g1b
Zfp428
Ifitm2
Ogdh
Zfp808
Ptpn13
Htr2a
Gripap1
Zbtb7b
Cbx1
Tor4a
Olfr1065
Cnn3
Olfr794
Klhl18
Kif9
Mas1
Ago2
Fbxo11
Ppp2r1a
Myh14
Defb1
Slc4a5
Acbd4
Plcd3
Cd160
Pdzk1
Ptch1
Naaa
Lmo2
Gdf15
Rps27a
Clhc1
Dpp6
Cs
Dapp1
Car2
Dpp10
Gas1
Diaph1
Snrpc
Atp6v1fnb
Atp6v1f
Gucy2g
Zswim4
Nt5e
Mbp
Dmbx1
Abcd2
Ccdc30
Wrap53
Trp53
Utp6
Plxnc1
Fam178b
Sult2a3
Srgap2
Fam72a
Bphl
Acin1
1700123O20Rik
Pcna
Aqp4
Abhd6
Slc5a11
Ptgr2
Gamt
Dazap1
Best2
Lrrc18
Scg2
Ubp1
Hells
Chd9
Zfp934
Zfp128
Gcnt2
Mycn
Ndufs8
Plxnb1
Gabarapl2
Gm3696
C130073F10Rik
Sephs1
Erbb4
Tdrd9
Atp5mpl
Gsc2
Ess2
Hoxc13
Spef1l
Ctbp2
Grm4
AB010352
Rnh1
2410137M14Rik
Cipc
Ppp1r15b
Smim43
Fam214b
Tescl
Trim62
Osbpl2
Zfp955a
Tspan31
Mettl8
Dcaf17
Pcnx3
Map3k11
Slc30a6
Il31ra
Naa16
AI661453
1700001C19Rik
Glmp
Ppp1r10
Mrps18b
Flt4
Slc7a7
Meis2
Tnrc18
Rhod
Mreg
Lrpap1
Zmynd8
Tmem107
Svopl
Chmp4c
Numa1
Slc25a44
Tdrd3
4930550C14Rik
Slx4ip
Mkks
Phf10
Tnfrsf8
Trip12
Fbxo36
Asap2
Plk3
9230112D13Rik
Mrps14
Zfp65
Slc1a5
Tpd52
Cnpy2
Nqo1
Ubxn4
Nrde2
R3hdm2
Dspp
Rnf220
Thada
Sptbn4
Gpr89
Blvrb
Tcea3
Dll1
Rab3ip
Evl
Gbp9
Zfp13
Pnn
Upp1
Ndufa12
Ppp3ca
Mxd4
Znrd1as
Znrd1
Gm3173
Slc18a1
Atp6v1b2
H2bc4
H2ac6
Vps18
Arhgef17
Rab7
Tyro3
Dmrta1
Ccdc63
Zscan10
Nip7
Cog8
Dchs2
Gm10710
Nop53
Sox4
Zfp217
Donson
Tlx3
Wdr34
Ror1
1700122O11Rik
Tnnt1
Kmt5c
Pes1
Zfp955b
Dnal4
Lhpp
Ctc1
Sntg2
Hgh1
Zfp935
Ccnc
Dpysl3
Sspn
Zfp608
Zfyve19
Dnajc17
Rhbg
Pcsk1
Cops9
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Nampt
Hoxa1
Ssc5d
Nat14
Kif22
Slco4c1
Actn4
Hjurp
A730008H23Rik
Ubap1
Npr1
Apool
G2e3
Pop7
Mup4
Ints12
Gstcd
Rab34
Chchd3
Rpl23a
Tlcd1
Emb
Pde4b
Rin2
Leprot
Hmgb2
Glul
Snx15
Atg4c
Gls
Meioc
Esrp2
0610040J01Rik
Tmem139
Casp2
Rtn4rl2
Ankle2
Bcat2
Terf2ip
Kars
Eloc
Trim11
Taf12
Rasl2-9
Gnpnat1
Rbm42
D830030K20Rik
Mrps23
Vmn1r1
Ybx1
Glyctk
Slc4a2
Cdk5
Rnase9
Nt5c3
Tyk2
Cbl
Bbx
Pih1d1
Aldh16a1
Tbc1d32
Ephb4
Coro1b
Pou2f1
Sp1
Rbm15
Mob1b
Zfp184
Il1rapl1
Mthfsl
Tfr2
Mtss1
Fam76b
Cep57
Ube2m
Chmp2a
Smim14
Gmeb1
Ptma
Msl1
Ric8b
Chsy1
Sergef
Cobll1
Tiam1
Msi1
Msra
Stap2
Mpnd
Ankrd40
Mlf2
Yeats4
Flrt3
Zc3h13
Dmkn
Erich1
Smarca2
Actn2
Zbtb45
Mad2l1bp
Kbtbd8
Pmaip1
Baz1a
Araf
Cntfr
Megf8
Fam181b
Hnrnpf
Fam227a
Cby1
Eml2
Nup107
Slc44a1
Fgf21
Fut1
Ankhd1
Fem1b
Bet1
Adamts1
Coq10b
Adnp
Ptprj
Gm973
Atp5g1
Rreb1
Dpep3
Kmt2a
Txnl4b
Dhx38
Lurap1l
Tmem87a
Ganc
Prps2
Polr2f
1700088E04Rik
Dppa3
Tmem37
Chst15
Stil
Gins1
Abhd12
Setd5
Gm6712
Tyr
Zfp532
Pipox
Gnai2
Crot
Mvb12a
Cdh7
Scn7a
Cubn
Gpx1
Pcbp4
Ccdc136
Abhd14b
Abhd14a
Prxl2b
Efemp1
Nr6a1
Fundc1
Kpna6
Rpl3l
Msrb1
Tuba1a
Pitx3
Gbf1
Rpl13a
Mphosph6
Rps11
Nat10
Ube2t
Plcxd1
Snapc5
Ldhb
Zbtb6
Olfr812
Agbl3
Hadh
A2m
Cd300ld3
3300002I08Rik
Taf6l
Relch
Pign
Mafb
Ints9
Hmbox1
Guca1a
Prkar1b
Dnaaf5
Synm
Zfp292
Adssl1
Spry2
Pex5l
Ovol2
Akp3
Grcc10
Ptpn6
Pcdh8
Hdac9
Chm
Mcf2l
Prox2
Dlst
Itpa
Ddrgk1
2410141K09Rik
Gm11634
Npat
Atm
Zfp280d
Rgs20
Fbrsl1
Kansl3
Fer1l5
Zfp936
Tdrkh
L3mbtl3
Rad9a
Glcci1
Igsf8
Zzef1
Cyb5d2
Mcts1
Zfp62
Etfb
Cldnd2
Dixdc1
Slc25a40
Dbf4
Lrrc71
Ppard
Trrap
Mpv17l2
Btbd19
Evi5l
Ficd
Dnm1l
Ptprn
Rpf1
Fbxl19
Ubl5
Fbxl12
Dll3
Fgfbp1
Chrm1
Asb1
Zdbf2
Tbcd
Ezh1
Utf1
Ufl1
Ccnyl1
Zswim8
Chchd1
Hlf
Itfg2
Sac3d1
Klhl7
P3h1
AU022252
Tmcc3
Pcsk9
Galnt12
Gpd2
Gpatch8
H4c2
H4c1
H3c1