ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9450558 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◣ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Denr
Qrich1
Cdk12
Wdr77
Atp5pb
Styxl1
Mdh2
Kmt2a
Scamp5
Rbm39
Slc26a8
Mapk14
Ireb2
Akap11
Eif4a3
Mcts2
Banp
Arf3
Hspa4
Psmd5
Cutal
Dnajb4
Fubp1
Ube2d3
Rraga
Ercc6l2
Naa35
Zzz3
Micos10
Ankfy1
Herc1
Supt5
Stxbp4
Cox11
Rps19
Smarca5
Nsun3
Golm2
Edrf1
Zbtb2
Btbd10
Tipin
Puf60
Zcchc14
Lsm14a
Slc25a11
Rnf167
Ddhd2
Tigd2
Rpl7a
Med22
Marchf7
Eif5a2
Myef2
Spdl1
Zkscan2
Dhrs3
Ssbp4
Uhrf2
Nudt1
Mrpl28
Dgke
Spsb3
Nubp2
Nptn
Rabl3
Gtf2e1
Huwe1
Ttc14
Tmem88
Naa38
Cyb5d1
D1Pas1
Mfsd8
Zfp91
Lpxn
Mob1a
Coq9
Ciapin1
Gm7762
Srek1
Rab6a
Creld2
Alg12
Tspan17
Fam135a
Pfkfb2
Yod1
Wdr27
1600012H06Rik
Tardbp
Fam76a
Map3k7
Atf7
Eif1ad
Banf1
Tmem200b
Nktr
Tmco1
Get4
Ell2
Dph1
Rtn4rl1
Calr3
1700030K09Rik
Mettl8
Dcaf17
Rnf4
Tubgcp5
Kazald1
Tmem134
Aip
Abcf2
Drg1
Cstf3
Kif2a
Polr2e
Zfp623
Slc10a7
Rbmxl1
Rnpc3
Srsf10
Smim10l1
Ccdc30
Adnp
Abhd18
Drosha
6030458C11Rik
Efs
Stk11ip
Vdac3
Tmem47
Thap7
Mbd6
Ddit3
Pou2f1
Wdr6
Trappc2
Ofd1
Dzip3
Cip2a
Tmem209
Ssmem1
Relch
Pign
Nfkbiz
Idh1
Pikfyve
Zmym3
Tcf25
Rps3a1
Eif5
Lrrc36
Kctd19
Rspry1
Psme3ip1
Asph
Ube2e3
Atf2
Tpr
Odr4
Cdc5l
Tcf3
Prmt1
Dbr1
Polr3k
Zfp960
Npm1
Sf3a2
Plekhj1
Dhx32
Sfi1
Gpc2
Stag3
Surf6
Rps7
Micu2
Nhp2
Dars
Trim24
Slc29a1
Mymx
Sacs
Homer3
Rab33b
Gtf2ird1
Cnot3
Tlk2
Khsrp
Accsl
Lamp1
Topors
Smim27
Prdx1
Arfip1
Rbm26
Epb41l5
Slc1a5
Septin7
Tdrd9
Atp5mpl
Adgrv1
Upf3a
Caprin2
Tprgl
Stk38l
Sec23ip
Mcmbp
Asxl1
Shroom3
Cpsf6
Zfp574
Grik5
Dynll1
Fzd6
Lrtm2
Ccdc88b
Tmem79
Smg5
Cldn34d
Npepps
Arl2bp
Ptpn4
Nsd3
Letm2
Gm5165
Phc2
Polr2b
Noa1
Clba1
Sspn
Ncoa4
Stk38
Tomm20
Hells
Haspin
Luc7l2
Snx5
Mgme1
Sap30bp
Recql5
Rps28
Zdhhc5
Dlc1
4833439L19Rik
Psmb2
Tspyl1
Srsf11
Lrrc40
Mettl16
Vinac1
Ttl
Nop14
Grk4
Glcci1
Exosc10
Supt16
Slc25a4
Donson
Kin
Atp5c1
Tysnd1
Seh1l
Chek2
Xxylt1
Cul5
Rif1
Ttc41
Hsp90b1
Usp53
Tmem191c
Rfesd
Mbtps1
Npc1
Ska2
Prr11
Pcmtd1
Zmym4
Zbtb40
Rc3h2
Csnk1g3
Lsm8
Rims3
Pum3
Zfand3
Lima1
Prss48
Lmln
Zyg11b
Zfp386
Rpl26
Gamt
Dazap1
Yif1b
Zfand2a
Smim7
Map1b
Cul3
Matr3
Siva1
Cep170b
Slc5a6
Atraid
Med16
Dennd2a
Ksr2
Trp53bp2
Exo5
Tnip2
Ptgr2
Cs
Myd88
Acaa1a
Utp3
Cwc25
Actn2
Gm51425
Tpmt
Kdm1b
Cenpb
Virma
Cep85
Pheta2
Smdt1
Yipf3
Polr1c
Erich1
Mrps14
4930447C04Rik
Gtf2a1
Dalrd3
Ndufaf3
Nupl1
Tmem129
Tacc3
Rnf220
Mre11a
Ankrd49
Pibf1
Dis3
Hip1
Flcn
Pih1d1
Aldh16a1
Idh3b
Larp4b
Slc38a9
Fam214b
Tmem18
Uqcrq
Gdf9
Mob1b
Glce
Pradc1
Cct7
Dnajc27
Jade1
Mcfd2
Osbpl2
Grb2
Mllt6
Tcam1
Smarcd2
Zfp78
Krr1
Ppp1r9a
Ggnbp2
Mysm1
Etfa
Ifrd2
Gdi2
Slc15a4
Sipa1l1
Gpx4
Smc1b
Chuk
Lta4h
Zscan22
Dusp6
Mrtfb
Grcc10
Uspl1
Phf23
Gabarap
Dvl2
Ctnnb1
Sh3gl1
Chaf1a
Mrps28
Dut
Rpl12
Lrsam1
Socs3
Riok2
Spata13
Cox7a2l
Anp32e
Gdf5
Znfx1
Ankrd40
Snrpd3
Gucd1
Tomm7
Zfp219
Trim11
Tmem253
Rictor
Sec63
Bclaf1
Lman2
Nrbf2
Hck
Tmem183a
Ranbp3
Sufu
Actr1a
Clec11a
Shank1
Ptrhd1
Cenpo
Ssbp1
Mrpl40
Hira
Gpr19
Kdm2b
Fnbp1
Rab5c
Rmnd5b
Gja1
H2aj
H4f16
Stn1
Rfx1
Mapk8
Rab43
Zfp622
Rpusd1
Chtf18
Ints6
Tmx3
Ppard
Ube2m
Chmp2a
Tmem181a
Trim59
Pop7
Kif5a
Dctn2
Zfp260
Zfp566
Spp1
BC004004
Ppil1
Ankhd1
Gabarapl2
Sugp1
Mau2
Lonp2
Pbld2
Hnrnph3
Frzb
Cox6b2
Stil
Mtf2
Bcat1
Hmgb2
Ccz1
Nsmce3
Brf1
Gm3448
Gm3417
Tcte3
Ermard
Slc39a9
Erh
Sap18b
Sap18
Ubr3
Ints13
Fgfr1op2
Pcnt
Snx12
Mars1
Itfg2
Ralbp1
Sec62
Rpl10a
Fam219a
Dnaic1
H2-Ke6
Slc39a7
Rxrb
Abi1
Cct5
Atpsckmt
Nt5e
Psma1
Etfrf1
Casc1
Rbks
Babam2
Rapgef6
Dnmt3a
Alpl
Rpl35
Arpc5l
Ahctf1
Ikzf5
Acadsb
Nudt2
Kif24
Rps6
Ccnb1
Zfp180
Nifk
Kctd7
Clasp1
Usp37
Srcap
Cnot9
Tas1r1
Nol9
Thada
Taok1
Papolb
Slc16a3
Spsb4
Rpl9
Lias
Ska3
Mrpl57
Ncoa2
Ehd1
Rpl13a
Rps11
Nup205
Porcn
B230219D22Rik
Sp1
Med13
Plekhb1
Trim35
Pik3c3
Ppm1g
Suv39h1
Mpv17l2
Zfp53
Yy1
Ints12
Gstcd
Vezf1
Cd2ap
Adpgk
Cd9
Xrra1
Spcs2
Myo10
Gins1
Abhd12
Gm2237
Zfp980
Efnb3
Vps28
Klhl18
Kif9
Gas1
Klf2
Rbm14
Gm21992
Add1
Rpp38
Acbd7
Asf1b
N4bp2l2
Ncapg
Prdm10
Vmp1
Ptrh2
Adss
Mib2
Gm3173
Mtmr12
Ncapg2
Abhd11
Txlng
Ctbp2
Zfp523
Prr19
Pafah1b3
Olfr1342
Kcnb1
H4c2
H4c1
H3c1
H1f1
Ikbip
Apaf1
Ergic2
Tbc1d14
Nbeal1
Me2
Gclm
Ncl
Zc3h4
Gpr157
Xpc
Lsm3
Fnbp4
Sde2
Optc
Pcm1
Wdfy3
9030025P20Rik
Tab3
2610528J11Rik
Actn4
Zfp609
Ndufa12
Med1
Mettl3
Gps2
Gjc1
Zfp428
Mreg
Mtmr9
Taf1b
Fbxo27
Rbm15
Cic
Pigo
Eef1a1
Fbln5
A930007A09Rik
Rbpj
Pmm1
Heatr1
Agl
Mmut
Cenpq
Ryr2
Zfp512b
Trrap
Nanp
Tmem218
E030030I06Rik
Tab1
Zdhhc17
Lrif1
Tbc1d32
Ostc
Lypla1
Gsc2
Ess2
Psph
Cct6a
Gpbp1
Fem1b
Otub2
Fadd
Lrba
Nt5dc3
Ptges3
Camk2d
L3mbtl2
Arl15
Zfp978
Spr
Zfp991
Nbeal2
Ccdc12
Hlf
Slx4ip
Mkks
Ddx20
Rtn4
Dctn1
Sgk1
Mindy4
Cbx1
Rps8
Gid8
Dido1
Gpr160
Tmem135
Pnpla6
Trp53bp1
Tmem143
Syngr4
Ell
Leprot
Megf8
Slc30a6
Hsbp1
Snx11
Men1
Jdp2
Ppm1d
Copb2
Polr2h
Clcn2
Khk
Msi1
Chmp4c
Miga1
Znrd1as
Znrd1
Qk
Sash1
Zkscan5
Zkscan14
Smad2
Zcwpw1
Mepce
Mterf1b
Zfyve28
Cfap99
Imp4
Ccdc115
Capn1
Stk35
Isl1
Cdk7
Thrb
Cactin
Rtkn2
Cct8
Wwc2
Tep1
Rnh1
Ino80
Mafg
Prpf4
Cdc26
Cdk1
Ramac
Lrrc2
Tdgf1
Timm17a
Tmem116
Nprl3
Erp29
Ddx4
Ypel2
Thyn1
Acad8
Kat7
Zfp317
Gm3411
Csde1
Sac3d1
Spint2
Vps50
Hepacam2
Ppp2r2d
Mapk1ip1
Adam17
Zfp972
Lats2
Rnf11
Plekhm3
Tubd1
Rps6kb1
Mthfs
Mmaa
Slc35b1
Tmem87a
Ganc
Shprh
Ing2
Aftph
Cdkn2aipnl
Spata33
Chmp1a
Usp20
BC005624
Wwox
H2bc4
H2ac6
Utp6
Zfp57
Ranbp17
Fcgr3
Prcc
Tcea1
Snrnp70
Atad1
Vps4b
Ppp1r12a
Vamp3
Rpf1
Ear10
Gm3667
Prcp
Ddias
Vcl
Lhpp
Cdc20
Tcf7l1
Cdiptos
Cdipt
Nrf1
Fgfr2
Mgat3
Spats2
Rab7
Zbtb22
Tapbp
Col13a1
2410141K09Rik
Zfp184
4931414P19Rik
Rnf212b
Slc25a36
Mphosph6
Olfr1358
Esrrg
Nsd1
Tssc4
Snrpc
Rmi1
Hnrnpk
Usp48
Laptm4a
Kmt5b
Poc5
Phf10
Vamp4
Prdm4
Cenpt
Thap11
Lactb
Scg3
Nanog
Pef1
Gm14393
Bet1
Crb2
Ybx1
Mppe1
Nup133
Magi1
2610042L04Rik
Spag16
Recql4
Lrrc14
Dtx2
Med23
Rad54l
Pnn
Mob3a
Izumo4
Trim37
Med6
Prepl
Camkmt
Bcl9
Srp19
Fam25c
Tecr
Trpc1
Polr2f
1700088E04Rik
Hdac6
Fbxo15
Cry2
Vmac
Ndufa11
Igsf21
Zswim7
Ttc19
Dhrs13
Nmb
Zfp13
Naaa
Mtfp1
Hspa2
Ift46
Arcn1
Os9
Prxl2b
Cers4
Ppp1r2
Mpp5
Mrps7
Gga3
Id3
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Arhgef17
Ppp2r1a
Zfp398
Hyou1
Xlr5b
DXBay18
Zfp286
Dnal4
Rpe
Tcf20
Coq8a
Mad2l1bp
Cnpy2
Dpp4
Ctdsp1
Akap1
Qsox2
Mtfr1l
Nepro
Fzd10
Eml2
Sirpa
Pak1
Polr1b
Wnk1
H3c15
H3c14
H2ac19
H2ac18
Eml5
U2af1
Tmem41b
Fmr1nb
Zfp600
Plekhg2
Synm
Tmem43
Chchd4
Rrnad1
Isg20l2
Pds5a
Nufip2
Etfbkmt
Rai1
Rax
Mis18bp1
P3h1
AU022252
Kansl1
Cep350
Nkx3-1
Tcf12
Arhgap12
Nfe2l2
Degs1
Rangap1
Lyrm7
Ost4
Gpr155
Kbtbd3
Bambi
Gm3739
Ep400
Supt6
Sdf2
Cfap298
Scaper
Rarres1
Ifitm1
Vmn2r12
Dnajc7
Sc5d
Bfsp1
Akap13
Ndrg3
Pdcl3
Ptpmt1
Ccdc194
Gm3435
Por
Tdp2
Acot13
Rad23a
Txnrd1
Mme
Cep70
Cep170
Sdccag8
Bricd5
Pgp
Dad1
Abhd4
Ubxn6
Hdgfl2
Cox16
Crot
Dguok
Zfp819
Nsun4
Foxp2
Polr3b
Erf
Gpcpd1
Ppp2r3a
Ercc5
Insr
Dppa5a
Fbrsl1
Psme2b