ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9450552 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◣ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Denr
Qrich1
Styxl1
Mdh2
Kmt2a
Scamp5
Cdk12
Wdr77
Atp5pb
Rbm39
Ireb2
Slc26a8
Mapk14
Eif4a3
Mcts2
Akap11
Psmd5
Cutal
Banp
Naa35
Rraga
Ube2d3
Arf3
Hspa4
Dnajb4
Fubp1
Golm2
Stxbp4
Cox11
Ankfy1
Ercc6l2
Tigd2
Micos10
Efs
Nsun3
Herc1
Zzz3
Dph1
Rtn4rl1
Dhrs3
Marchf7
Eif5a2
Mrpl28
Slc10a7
Rbmxl1
Smarca5
Srek1
Tspan17
Zkscan2
Slc25a11
Rnf167
Zcchc14
Supt5
Rabl3
Gtf2e1
Zbtb2
Ell2
Rspry1
Psme3ip1
Myef2
Btbd10
Stk11ip
Arfip1
Rpl7a
Med22
Abcf2
Calr3
1700030K09Rik
Spdl1
Zfp623
Uhrf2
Adnp
Lsm14a
Tipin
Epb41l5
Spsb3
Nubp2
Edrf1
Rps19
Pou2f1
Ccdc30
Puf60
Surf6
Eif1ad
Banf1
Homer3
Tdrd9
Atp5mpl
Polr2e
Lrtm2
Vinac1
Ttl
Ssbp4
Ttc14
Polr3k
Tprgl
Tmem47
Ddhd2
Nudt1
Nfkbiz
Prmt1
Creld2
Alg12
Sacs
Nptn
Phc2
Stk38
Cpsf6
Zfp960
Ska2
Prr11
Mbd6
Ddit3
Fam76a
Chek2
Khsrp
Mob1a
Coq9
Ciapin1
Mettl8
Dcaf17
Tubgcp5
Adgrv1
Slc16a3
Lmln
Smim10l1
D1Pas1
Map3k7
Tmem88
Naa38
Cyb5d1
Gtf2ird1
Get4
Ppard
Caprin2
Myd88
Acaa1a
Uspl1
Dynll1
Upf3a
Slc1a5
Tomm20
Virma
Gm7762
Drg1
Dhx32
Cstf3
Rps7
Ttc41
Hsp90b1
Zfp91
Lpxn
Gdf5
Trappc2
Ofd1
Dgke
Dlc1
Vdac3
Ccz1
Zfp574
Grik5
Tmem200b
Rif1
Wdr27
1600012H06Rik
Drosha
6030458C11Rik
Prdx1
Rab6a
Hip1
Lima1
Znfx1
Mfsd8
Rnf4
Zfp979
Ypel2
Pfkfb2
Yod1
Snrpd3
Gucd1
Srsf10
Lamp1
Tmem209
Ssmem1
Zfand3
Tmem134
Aip
Prss48
Rims3
Tmco1
Gpx4
Dennd2a
Kazald1
Zfp980
Med16
Dalrd3
Ndufaf3
Wdr6
Ifrd2
Cs
Trim35
Ctnnb1
Xxylt1
Frzb
Npepps
Cep170b
Eif5
Gpc2
Stag3
Tysnd1
Msh2
Gm5165
Fam135a
Mcfd2
Sf3a2
Plekhj1
Shroom3
Tmem181a
Rnpc3
Nifk
Socs3
Atf7
Abhd18
Rbm26
Smim7
Gm3173
Dnmt3a
Asxl1
Rab43
Mrps14
Tardbp
Nupl1
Mreg
Zyg11b
Fam214b
Cdc5l
Zfp260
Zfp566
Zfand2a
Mllt6
Mtf2
Ptpn4
Phf23
Gabarap
Dvl2
Srsf11
Lrrc40
Trim11
Uqcrq
Gdf9
Cul5
Zmym4
Slc29a1
Mymx
Vezf1
Tmem191c
Trp53bp2
Seh1l
Gm3411
Mrps28
Rnf220
Tmem135
Chuk
Zfp386
Bcat1
Anp32e
Psmb2
Etfa
Relch
Pign
Gja1
Ptrhd1
Cenpo
Fam219a
Dnaic1
Mindy4
Zbtb40
Clec11a
Shank1
Slc25a4
Tnip2
Sfi1
Zfp78
Dars
H2aj
H4f16
Accsl
Erich1
Tmem79
Smg5
Npc1
Huwe1
Clba1
Cwc25
Stk38l
Sap30bp
Recql5
Zfp180
Gamt
Dazap1
Lrrc2
Tdgf1
Dbr1
Ncoa4
Dnajc7
Klf2
Map1b
Kdm2b
Ryr2
Atf2
Tlk2
Tomm7
Siva1
Sp1
Donson
Rps3a1
Dut
Zfp600
Zscan22
Cic
Ankrd40
2610528J11Rik
Rmnd5b
Pop7
Larp4b
Ccdc88b
Kif2a
Exo5
Rab33b
Ggnbp2
Naaa
Lta4h
Cox6b2
Tpmt
Kdm1b
Vps28
Psma1
Mmut
Cenpq
Micu2
Actn2
4930447C04Rik
Cd9
Lrrc36
Kctd19
Krr1
Asph
Zmym3
Optc
Thada
Efnb3
Rtn4
Ankhd1
Ncoa2
N4bp2l2
Riok2
Mapk8
Slc5a6
Atraid
Fam25c
Mob1b
Gpr157
Clasp1
Tcf3
Porcn
Sap18b
Sap18
Glcci1
Rc3h2
Dzip3
Cip2a
Stk35
Rfesd
4833439L19Rik
Pum3
Znrd1as
Znrd1
Wdfy3
Tmem143
Syngr4
Arl2bp
Fzd6
Supt16
Thrb
Nt5e
Myo10
Cul3
Cox7a2l
Slc38a9
Ube2e3
Slc39a9
Erh
Cnot3
Mars1
Hells
Mettl3
Rbks
Babam2
Cep85
Pih1d1
Aldh16a1
Lman2
Mysm1
Pmm1
Spsb4
Zfp53
Ints6
Etfrf1
Casc1
Sspn
Yif1b
Mtmr9
Vmn2r12
Zfp622
Zfp609
Thap7
Haspin
Rpl10a
Tcf25
Msi1
Kctd7
Heatr1
Pcca
Tcam1
Smarcd2
Lypla1
Plekhb1
Nkx3-1
Idh1
Pikfyve
Ear10
Nsmce3
Ptgr2
Tdrd1
Ccdc186
Nup205
Ube2m
Chmp2a
Trim24
Rpl26
Lrba
Ms4a10
Pibf1
Dis3
Rnh1
Ksr2
Klhl18
Kif9
Npm1
Rictor
Ccr4
Slc15a1
Osbpl2
Spr
Rps28
Idh3b
BC107364
Bambi
Rpusd1
Chtf18
Gm3667
Rpl12
Lrsam1
Add1
Utp3
Mad2l1
Fnbp1
Gm51425
Tab1
Ppp2r2d
Mapk1ip1
Rab7
Spp1
Ostc
Pcyt1b
Ing2
Tmeff1
Utp6
Topors
Smim27
Pcmtd1
Luc7l2
Trrap
Sec23ip
Mcmbp
Glce
Gas1
Nktr
Septin7
Pigo
Os9
Ifitm1
Ssbp1
Gabarapl2
Slc30a6
Pheta2
Smdt1
Exosc10
Arl15
Alpl
Zfp13
Pradc1
Cct7
Cdiptos
Cdipt
Spag16
Ints12
Gstcd
Poc5
Nsd3
Letm2
Flcn
Tmem218
Vcl
Gps2
Cep70
Taf1b
Cenpb
Spef1
Tpr
Odr4
Csnk1g3
Fgfr2
Otub2
Lrrn2
Ogn
Dnajc27
Pemt
Prrt3
Fnbp4
Med13
Nt5dc3
Id3
Rbm14
Gm21992
Mettl16
Sec62
Elovl5
H4c2
H4c1
H3c1
H1f1
Sde2
Hnrnpu
Agl
Cactin
Tbc1d14
Smc1b
Nhp2
Slc4a5
Hck
Zfp286
Hvcn1
Ybx1
Gm3696
Psma6
Med23
Tspyl1
Tmem18
Prr19
Pafah1b3
Crb2
Lyg2
Mterf1a
Scg2
Mplkip
Nodal
Sirpa
Il18
Bco2
Epop
Ankle2
Zc3h4
Atad1
Sft2d1
Fbrsl1
Cldn34d
Fbxo27
Magi1
Lrif1
Olfr1342
Ndufa12
Gm3448
Gm3417
Gm3435
Psph
Cct6a
Trim59
Grb2
Dad1
Abhd4
Sufu
Actr1a
Slc35b1
Cnot6l
Casq2
4833420G17Rik
Pcnt
Imp4
Ccdc115
Thoc3
Jdp2
E030030I06Rik
L3mbtl2
Zfp523
Chmp4c
Stil
Raver1
Kin
Atp5c1
Phf10
Nsun4
Rps8
Samd14
Mbtps1
Ppp1r9a
Zfyve19
Dnajc17
Tcte3
Ermard
Gdi2
Ahctf1
Gpbp1
Polr2h
Clcn2
Kcnb1
Ikzf5
Acadsb
Tcf7l1
Rps6
Tal2
Nrf1
Phyhipl
Tmem129
Tacc3
Mre11a
Ankrd49
9030025P20Rik
Ppp3ca
Rtkn2
Aftph
Ranbp3
Slc44a5
Esrrg
Kat7
Cfap298
Sgk1
Prdm10
Zswim1
Spata25
Usp53
Tmx3
Snx11
Aptx
Rnf212b
Ska3
Mrpl57
Fzd10
Sec61b
Alg2
Cox16
Dusp6
Slc25a36
Copb2
Zfp428
Tep1
Khk
Eml2
Zbtb22
Tapbp
Jade1
Mib2
Tymp
Sco2
Odf3b
Ubr3
Sh3gl1
Chaf1a
Lonp2
P3h1
AU022252
Msrb2
Ctbp2
Tecr
Lin28a
Lrpap1
Cenpu
Nrbf2
Tmem183a
Mrtfb
Capn1
Rhbg
Dgka
Plxdc1
Gtf2a1
Pym1
Luzp1
Tjp2
Dcp1a
Fbxo11
Kmt2d
Rex2
Guca1a
Sf3b4
Snx18
Kbtbd8
Olfr1358
Kif5a
Dctn2
Cdrt4
Zc3h6
Papolb
Sash1
Men1
Por
Tas1r1
Nol9
Ccno
Gins1
Abhd12
Slc15a4
Pifo
Lactb
Rnf103
Gpr19
Asf1b
Rpl13a
Rps11
Mppe1
Actn4
Gba
Nop14
Grk4
Tbc1d32
Zfp808
Terb2
Patl2
Snrpc
Camsap1
Ccdc63
Yy1
Atp6v1fnb
Atp6v1f
Med6
Araf
Leprot
Zdhhc17
Hmgb2
Gm3558
Ikbip
Apaf1
Smim26
Chmp5
Bag1
Isl1
Ccnb1
Gapdh
Spata13
Txlng
Ramac
Txnl4b
Dhx38
Rpl9
Lias
U2af1
Ppp2r3a
Prcp
Ddias
Ap1g2
Degs1
Armcx1
Zfp972
Zfp978
Zfp991
Cadps
Fbxo15
H2bc4
H2ac6
Ppp2ca
Slc27a1
Nxnl1
2610042L04Rik
Dppa5a
Tcea1
Etfbkmt
Galnt16
Trip4
Csnk1g1
Acbd4
Plcd3
H2-Ke6
Slc39a7
Rxrb
Prepl
Camkmt
Prdx6
Setx
Rnf11
Spata33
Chmp1a
Cdk7
Polr3b
Paxx
Clic3
Rai1
Ube2cbp
Dop1a
Slx4ip
Mkks
Nrtn
Dus3l
Wfs1
Tnrc18
Itfg2
Ppp1r2
Rrs1
Adhfe1
Cry2
Glmp
Hmgxb3
Dguok
Trpc1
Thyn1
Acad8
Sergef
Grcc10
Nsd1
Adam17
Mrpl40
Hira
Polr1b
Tbc1d10b
Mylpf
Wnt10a
Smim40
Rad54l
Rpf1
Zfp219
A930007A09Rik
Trh
Agrp
Pfkfb4
Tmem253
Trp53bp1
Ctdsp1
Cdk19
Pex14
Gpcpd1
Polr2b
Noa1
Wwox
Lats2
Tbp
Psmb1
Inpp5a
Gjc1
Mad2l1bp
Pnn
Mafb
Nbeal1
Gpr89
Cep350
Rax
1700113H08Rik
Stn1
Abhd17c
Supt6
Sdf2
Scaf4
Ints9
Hmbox1
Gripap1
Rap1gap
Carmil1
Zcrb1
Pphln1
Pnpla6
Pdlim1
Eef1a1
Eefsec
Ccdc194
Hnrnph2
Gla
Gpr160
Pard6b
Cops4
Snx5
Mgme1
Rab5c
Rfx1
Chrm4
Dtx2
Eif4a1
Kbtbd3
Ccnyl1
Evi5l
Trim37
Marchf9
Ezh2
Rpp38
Acbd7
Mis18bp1
Rab38
Mpv17l2
Slc39a14
Vav3
Fam161a
Zfp605
Gtpbp6
Ogdh
BC004004
Ppil1
Srsf1
Gsc2
Ess2
Abi1
D5Ertd579e
Lrrc4c
Matr3
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Lsm4
Brf1
Nfkbil1
Atp6v1g2
Map4k1
Eif3k
Pou3f1
Pard3
Xrra1
Spcs2
Tab3
Nudt2
Kif24
Nanog
Prcc
Rbm48
Pex1
Steap3
Nkap
Tma7
Ccdc51
Map3k12
Sec63
Cdkn2aipnl
Rapgef6
0610040J01Rik
Atp6v0d1
Prdm4
Ubxn6
Hdgfl2
Gabpb2
Vps4b
Twistnb
Pou4f1
Zfp317
Gas8
Dbndd1
Mtss2
Rhod
Ifnar1
Taf12
Snrnp70
Icam5
Icam4
Gm7244
Cd2ap
Qk
Cenpt
Zc3hc1
Thap11
Abcb1b
Mettl15
Kif18a
Mterf1b
Zkscan5
Zkscan14
Ccpg1os
Ccpg1
Arhgap28
Kctd5
Col13a1
Dmtn
Itpa
Ddrgk1
Pakap
Cct5
Atpsckmt
Syce3
Tcp11
Enpp3
Gata2
Arx
Fgd4
Tnrc6b
Zfp512b
Zfyve28