ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416204 | Embryoid Bodies
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◢ SRX7416180: Embryoid Bodies

◢ SRX7416181: Embryoid Bodies

◢ SRX7416194: Embryoid Bodies

◢ SRX7416195: Embryoid Bodies

◢ SRX7416203: Embryoid Bodies

◣ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Pdzd3
Nlrx1
Cacna1c
Slc25a1
Chn1
Syt17
Prr30
Vwf
Mtf2
Uap1
Lrrc18
Cdh5
Adnp
Ptpre
Atp4a
Kctd3
Gdnf
Phc2
Asprv1
Chst14
Heg1
Osbpl2
Usp26
Ubl4b
Ncoa5
Lsmem2
Ifrd2
Tfrc
Ascc2
Fgf2
Lvrn
Epb42
Alpl
Lpar1
Pipox
Ackr4
Ankrd6
Abca16
Ehf
Fhdc1
Ebag9
Mfap1b
Mafa
Glra1
Tm9sf4
Txlng
Irgm2
Smc4
Ift80
Zfp407
Srprb
Bin2
1700024G13Rik
Zfp72
Nedd9
Tcf20
Olfr24
Cmss1
Slc1a3
Ush2a
Krtap3-3
Krtap3-2
Krt40
Trim38
Map10
Zfp11
Naaladl2
Gm5771
Lbh
C1d
Ptger2
Fbp1
Marchf3
4921536K21Rik
Scube2
Rai14
Scamp2
Mpi
Edn1
Pmp22
Cited2
Cd59a
Evc2
Evc
Rab38
Prkar2b
Pam
Hes1
Laptm4b
Scn1a
Zfp330
Plekha5
Prickle1
Zfp677
Ets1
2810006K23Rik
Mphosph9
Serinc5
Gm829
Rcbtb1
Lin28a
Gng4
Krt8
Ccdc38
Amdhd1
Lrrc72
Sf3b1
Zkscan1
Slc6a5
Med27
Ppp1r7
Pask
Arhgap10
Acyp2
Spz1
Oxr1
Abhd17b
1110059E24Rik
Tcf7l2
Spatc1l
Inpp4a
Tmcc1
Ube2cbp
Dop1a
Cald1
Adipor2
Serhl
Mrpl20
Ankrd65
Ccdc171
Cbll1
Pcgf5
Vgll1
Nkx3-2
Bbs5
Mark2
Pim2
Map3k20
Strap
Mettl16
Prss48
Eps8
Prss1
Ccm2l
Scap
Il1b
BC016579
Cgnl1
Fgfr3
Hipk1
Spata2
Rnf114
Morf4l1
Pknox2
Plcxd1
Tnfaip8
Rps19
Dmrtc2
Lypd4
Zfp710
Rgs3
Fem1al
Jam3
Tenm4
C1galt1c1
Wnt16
Pcdhac2
Phox2b
Mbp
Krtap31-1
Plcxd2
Acsm2
Acp5
Gfra3
Arfgef1
Maco1
Zfp609
Slc22a1
Gpr135
Epb41
Pla2r1
Lrrfip1
Zbtb10
Pttg1ip2
Kat6b
Arx
Lamc2
Lrrc4
Olfr435
Olfr434
Olfr715
4921504E06Rik
Snx32
Gm5108
Srcin1
Myl4
Cdc27
Scn7a
Lrrc10
Rbm34
Prxl2a
Aldh1a2
A530016L24Rik
Rprm
Crkl
Grik3
Kazald1
Tarm1
2210010C04Rik
Gmnc
Sugct
Mplkip
Frs2
6430571L13Rik
Lsamp
Lonp2
4930447A16Rik
Rock2
Nf2
Rtl8a
Dcp1b
A4gnt
F11r
Abtb2
Nt5e
Apold1
Gnai2
Cystm1
Lrrn2
Rag2
Iftap
Id1
Olfr1250
Bmi1
Tmem169
Pecr
Bmpr1a
Schip1
Cltb
Rdx
Plin3
Taldo1
Krt39
Gm4861
Erfl
Spty2d1
Klhl5
Mical1
Hoxa4
Sox5
Cpsf4l
Mrvi1
Greb1
Gm2511
4931406B18Rik
Wnt1
Ddn
Ldhb
Apoh
Gm973
Zfp335
Ctdsp2
Avil
Angptl7
Ccr2
Slc9a9
Gm51263
Megf10
Olfr1024
Msantd3
Peli3
Pabpc1
Lhpp
Mgat4c
Gtf2a1
Ppfia1
Gtf2ird2
Esrrg
Ccdc88c
Abl1
Sowahd
Alb
Mcub
Cog6
Ncf1
Svs3b
Elavl4
Ndnf
Adcy3
Tex21
Ythdf2
S100g
Zfp33b
Mfn1
Prkci
Klf9
Zc2hc1c
Acyp1
Gse1
Plcl1
Pgap4
Gja1
Frat2
Cdk7
Nt5c2
Ina
Hoxc6
Hoxc5
Zfp808
Bard1
Marf1
Acbd3
Ptk7
Stat3
Camk1d
Dennd2c
Ski
Pbx3
Glp1r
T2
Fgfr2
Zkscan2
Ubxn4
Myh10
Ing4
Acrbp
Bglap2
Bglap
Gm13271
Psd3
Prkag2
Smim11
Kcne2
Fgf8
Msra
Chrna7
Fbxw7
Rnase12
Rnase11
Cyp1b1
Gmfb
Zw10
Cldn25
Ptgdr
Pex5l
Cstf2t
Erc2
Ptprd
Manbal
Stx17
Usf3
Bcap29
Arap2
Pex2
Frem2
Vta1
C2cd5
1700001C19Rik
AI661453
Rybp
Acpp
B4galnt2
Cdrt4
Atp8a1
Map2k6
Mier1
Wdr78
Tom1l1
Mtmr7
Slc35e2
Enpp1
Hoxb4
Hoxb3
Sod3
Hsf2
Foxa2
Htt
Morc4
Tcp11l1
Pin1rt1
Tas2r118
Daam1
Ndufaf4
Yap1
Zfp580
Ccdc106
Hesx1
Olfr126
Upp1
Pabpc1l
Zcrb1
Pphln1
Sohlh2
Gm29733
Uba3
Arl6ip5
Tubgcp5
Gli2
Spag6l
Rpl31-ps12
Slc25a4
Xrn2
Trim2
Smim8
Csmd2
CK137956
Cachd1
Tbc1d22a
Ifitm1
Trpm3
Lce6a
Gpr84
Abcc4
Tnks2
Rnf43
Adk
Olfr1335
Pmaip1
Dhx8
Megf9
Rpia
Dlgap1
Gm5134
Imp4
Ccdc115
Apol7b
Amacr
Nfat5
Mfsd4b1
Gbp3
Trappc1
Kcnab3
Cntrob
Pdlim3
Atp1a2
Efna5
Hnrnpr
Csta1
Brinp1
Acvr1b
Slc4a7
Hsd17b3
Osmr
Pitrm1
Herc2
Nprl3
Hba-x
Gnrh1
Zfp937
Efcab5
Fam214a
Pde6h
Arhgdib
Khdc1b
Plxnc1
Ahcyl2
Cldnd1
Stra6l
Grsf1
Zdhhc1
C1ql1
Pik3ap1
Slc26a8
Mapk14
Olfr535
Zfp146
Psma5
Yes1
Zdhhc7
6430548M08Rik
Foxp1
Pctp
F2rl1
Rbbp7
Hcn4
Pdgfc
Nectin3
Dact1
Zgrf1
Larp7
Ppef2
Prdx6
Fam126a
Fmo4
Mrps23
Lmo7
3300002I08Rik
Mrm3
Glod4
Rcan1
Hhat
Eya1
Fgl1
Cacna2d1
Rffl
Kpna1
Il17rd
Xpo6
Cnn3
Sgcd
Kat7
Slc25a17
Slc16a2
Pla2g12b
Wipf1
Mapre1
Rtl8c
Plcb4
Slco4c1
Cdyl
Olfml3
Extl3
Smim3
Neurog2
Csnk1a1
Arhgef37
Sez6
Piwil4
Gsx2
Wnt8a
Arid3b
Npy
Hoxb8
Hoxb7
Tor3a
Zfp442
Ext1
Ankrd61
Ccno
Entpd6
Polr2m
Chmp2b
Mapkap1
Cdca7l
Vcam1
Tox4
Rab2b
Map4k4
Pnliprp1
Dnah5
Dusp14
Pkdcc
Smoc1
Pik3r4
Ncf2
Olfr794
Rnf220
Adh5
Clcn5
Eno1
Tbc1d32
Palld
Parvb
Phyhipl
Pigm
Plac1
Snrnp27
Mxd1
Tle3
Wsb2
Etfbkmt
Hoxc4
Srp19
Igdcc4
Atoh7
Exoc5
Ap5m1
Med16
Sparcl1
Sesn2
Gpr85
Cryzl2
Noc4l
Ddx51
Defb10
Heatr3
Ppp1r9a
Pgghg
Lacc1
Ccdc122
Spred1
Rnf213
Rassf4
Cemip2
Jam2
Olfr731
Olfml2a
Nr6a1
Irx1
Tex55
Vps54
Mfsd4b5
Skida1
Man1a2
Aven
Etv1
4930558K02Rik
Coq10a
Ankrd52
Prelid2
Mycn
Med12
Il2rg
Gm614
Ptpdc1
Tiam2
Ppfia4
Gfi1b
Gpr146
Fam71e2
Nrg1
Myo1h
Gdf10
Sh2d4a
Pkig
Exoc6b
Pomt1
Sema6a
Gabrr3
Rbmy
Gm21708
Gm21704
Gm21693
Gm21677
Mtss1
Tmem185a
Rrp36
Mea1
Klhdc3
Shroom4
Arid4a
E030030I06Rik
Raet1e
Raet1a
Lgi1
Hoxb6
Hoxb5
Epha5
Adcy5
Zfp446
Tbcel
Zfp64
Map7d3
Krba1
Sh3bp2
Lama1
Ccnt2
Radil
Txnl1
Foxd3
Lpar6
Xkr4
Ank3
Mbtps2
Zfp292
Cga
Abcg2
Olfr1350
Zeb2
Macroh2a1
Prtg
Slc3a2
Gm12789
Igsf3
Asxl3
Cxcl12
Taar7f
Zfp111
Myef2
Rom1
Eml3
B3gat3
Zfyve27
Fry
Epha2
Pbk
Cyp1a1
Tbx19
Slc25a36
Hpdl
Krtap7-1
Tgfbr3
Minar2
Cox8b
Parp16
Mrpl23
Gm7932
Lman1
Rgs22
Zfp60
Ptprz1
Synm
Ssu72
Rbm12
Cpne1
Crb2
Igf1
Trim59
BC107364
Slc6a3
Dram1
Gm29797
Rnf125
Nsg2
Wdr47
Ccdc33
Glod5
Pvrig
Il1rap
Dpp6
Slc5a3
Mrps6
Qrfpr
Tmco5
Map7
Slc10a6
Cntnap3
Spata31
P4ha3
Lrguk
BC048679
Ap3b2
Mettl7a1
Ank2
Gm4559
Dnd1
Wdr55
Eri3
Ino80
Nufip2
Gprc5a
Anxa3
Ankrd22
S100a11
Zfp800
Usp31
Cpa2
Neo1
Sybu
Stk32b
Tcf7l1
Irf2bp1
Meis2
Olfr572
Olfr571
Fgfbp1
Cdca7
Vmn1r1
Cyp11a1
Naf1
Sgms1
Sprr2a2
Sprr2a1
Txndc16
Gpr137c
Dnajc6
Faah
Gpr119
AB010352
Serpinb3c
Irgq
Fzd10
Ero1b
Aff1
Pla2g4d
Hip1r
Sptbn4
Mrgbp
Defb11
Ube2l3
Papss1
Il1a
Mroh2b
Ireb2
Aard
Srbd1
Lrif1
Zfp428
Dus4l
Cog5
Ccdc174
Chrna9
Utp4
Derpc
Chtf8
Olfr1034
Olfr1328
Kif15
1110059G10Rik
Cldn10
Gtsf1l
Plekha7
Pdpn
Themis3
Itprip
Htr3b
Agmo
Scube1
Trerf1
Ufsp1
Trip6
Srrt
Tigd4
Tex26
Aff3
Snurf
Snrpn
Grhl1
Ccdc58
Gm4791
Zfp316
Wdr49
Hnf1a
Cib2
Plce1
Fam160b1
Mical2
Arhgap12
Tmem92
Osbpl6
Bhlhe22
Pcdhgc5
Pcdhgc4
Pcdhgc3
Krtap4-9
Krtap4-8
Gm11595
Smarca2
Cdx2
Slc39a14
Psmd7
Znrf3
Il13
Phactr1
Nol4l
Cuedc2
Bicd1
Col4a2
Zfp503
Btn2a2
Cdc42ep4
Smap2
Cds2
Krt72
Olfr891
Fbxl5
Epha1
Phf24
Rtl8b
Cyp2b10
Eva1c
Wdr91
Stra8
Pinx1
Poli
Ikzf4
Rif1
Chrna2
Sertad4
Slc36a1
Apol7e
Npy2r
Pigyl
Npc2
Isca2
Glipr1l2
Cx3cl1
Wdpcp
Mdh1
Fam181a
Gm4064
Gm10352
Gm10256
Frem1
Snrpa1
Selenos
Ffar4
Eif3a
Runx1t1
Scn8a
Sh3bgr
Lca5l
Grip1
Kif21a
Smad2
Ankrd13c
Lnpk
Irx2
Hsd11b1
Esrrb
Nodal
Tanc1
Wfdc21
Heatr6
Tmem35a
Cenpi
Vps33a
Syncrip
Rlim
Tmem135
Fzd4
Zfp119a
Hoxa2
Hoxa1
Tmem91
Tgfb1
B9d2
Ghr
Zic5
Zic2
Shoc2
Bbip1
Taar8b
Taar8a
Ifna5
Ifna4
Ifna1
Rab12
Cntn1
Nepn
Gopc
Os9
Arl4a
Olfr616
Olfr615
Ptprg
AI413582
Higd1c
Mettl7a2
Methig1
Atf1
Acsf2
Gm5414
Susd6
Cd83
Arhgap17
Slc22a8
Pdx1
Phc1
Cds1
Galnt1
Tubb5
Mdc1
Phactr2
Usp51
Cdh20
Sirt2
Nfkbib
Ccer2
E2f6
Nin
Golga5
Tbc1d31
Ptpn18
Reg4
Fxn
Ndufb4
Gas1
Vamp9
Olfr414
Bcl6
Amd2
Amd1
Ccdc194
Acsm1
Barx2
Pptc7
Krtap19-2
Krtap19-1
Ifitm5
Ifitm2
Tmed10
Arsg
Clec4b2
Mfsd14a
Wdr82
Niban1
Ly6m
Sdc3
Pias1
Spock3
Bcr
Lemd2
Tll1
Gabra3
Cradd
Vav3
Dtwd2
Tab1
Exoc4
Prdm10
Gm7244
2810021J22Rik
Uqcc2
Exoc2
Nat8
Smim34
Fam243
Map3k5
Palmd