ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416181 | Embryoid Bodies
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◢ SRX7416180: Embryoid Bodies

◣ SRX7416181: Embryoid Bodies

◢ SRX7416194: Embryoid Bodies

◢ SRX7416195: Embryoid Bodies

◢ SRX7416203: Embryoid Bodies

◢ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Crkl
Pdlim5
Hdx
Alb
Snrnp27
Mxd1
Riox2
Gm973
Zfp330
C1ql3
Palld
Map4k5
Atl1
Ubl4b
Ackr4
Prdm13
Srpx
Gnat3
Fam174a
Cacna1c
Gpr84
Plxnc1
Rarb
Bend4
Ddx1
Ece1
Rab19
Slc37a3
Otp
Ifrd1
Slc5a12
F11r
Zc2hc1c
Eps8
Foxp1
Dmrta1
Hoxc6
Hoxc5
Hsdl2
Synpo
Pou3f2
Hoxa4
St3gal2
Nkx6-1
Dnajb13
Cemip2
Vmn2r23
Pou1f1
G2e3
Mllt3
Acsf2
Tmem268
Atp6v1g1
Efcab5
Rtl1
Slc27a4
Hoxb6
Hoxb5
Mmrn1
Prmt3
Ndnf
Tox
Atic
Ccdc187
Hoxc4
Gtf2h4
Lpp
Cacnb2
Hoxd4
Hoxd3
Lsamp
Pdgfc
Foxn3
Scube2
Trio
Trib2
Pik3r1
Dcbld2
Aldh1a2
Cpsf1
Hoxb4
Hoxb3
Arfgef1
Rtn1
Zfp503
Myo10
Pou2f1
Slc31a2
Efnb2
Lrp12
Atp8a1
Lratd2
Il20rb
Ffar4
Krt222
Cacna2d1
Cxcl12
Pbx3
Smad1
Pkdcc
Cep128
Cdca8
9930104L06Rik
Aff3
Hoxc8
Ccdc33
Lrrc18
Nrg1
Atp1b4
Dph5
Dnah5
Alyref2
Prkar2b
Lep
Pgbd5
Pax8
Cul3
Zadh2
Tshz1
Neurod4
Fyn
Rap1gds1
Epha5
Angptl7
Kif13b
Gp1bb
Dtx4
Met
Pbx1
Marchf3
Copz1
Mafa
Mecom
Rnf165
Crp
Gdf10
Jakmip2
Scmh1
Gpx2
Pgm2
Ubl3
Psd3
Olfr298
Bicd1
Cntnap2
Hoxa2
Hoxa1
Dll1
Thumpd2
Rab22a
Zdhhc2
Sstr2
Rbfox2
Adtrp
T2
D6Ertd527e
Phc2
Mcub
Adh5
Abcc4
Olfr646
Slc4a10
Gapdh
Esrrg
Rara
Dbx2
Cxxc4
St8sia2
Baalc
Hipk3
Tbc1d22a
Wt1
Tecta
Lrguk
Kifc3
Pitpnc1
Psmd12
Adgrv1
Prickle2
Nap1l1
Fgd3
Lyrm9
Tjp2
Hpf1
Fam160a1
Olfr172
Cradd
Tshz3
Glp1r
Epb42
Polr3gl
Lix1l
Ankrd34a
Ccdc182
Dach1
Map6
Srsf6
Dmrt3
Prickle1
Runx1t1
Csrnp3
Mrpl36
Higd1c
Uncx
Asxl3
Mnx1
Plpp6
4430402I18Rik
D1Pas1
H6pd
Dhx8
Kcnip2
Shisa3
Lhx1
Map3k7cl
Lrrn1
Mtif3
Slc22a1
Epb41l4b
Ppm1e
Ermn
Pde9a
Map4
Tmem184a
Psmg3
Dctd
Hpdl
Toe1
Mutyh
Sgcd
Tnfsf13b
Pde10a
Arglu1
Ociad2
Gm14092
Hoxb8
Hoxb7
Clvs2
Olfr572
Olfr571
Grik4
Clasp2
C6
Ptprd
Dusp5
Btg2
Clmn
Niban1
Foxp2
Slc25a41
Slc25a23
Grpel2
Crb1
Rbp2
Ttc30a1
Myo1d
Mab21l2
Grid2
Itga4
Lemd2
Dennd5a
Csrp3
Grap2
Nme6
Robo2
Uri1
Cited2
Gtf2a1
Hs3st3b1
Hagh
Fahd1
Ankrd6
Skil
App
Krtap19-2
Krtap19-1
Mpzl3
Nkx2-2
Fam78b
Msrb2
Fgf13
B3galt1
Radil
Meis3
Pcnx
Olfm2
Ppp1r3e
Bcl2l2
Oxnad1
Dph3
Nxpe4
Olfr898
Ror2
Gas1
Pitrm1
Ogfod1
Nudt21
Prdm6
Rptor
Tra2b
Dst
Zfp608
Psmd7
Rab27a
Mdm2
Ksr1
Tmem144
Gucy1a1
Tmco5
Gfra3
Hoxa6
Hoxa5
Gria4
2610528A11Rik
Spag17
Ncf1
Vps41
Slc44a3
Ccdc174
Mbp
Lect2
N4bp2l1
Asic4
Gpc6
Pkhd1l1
Mgat5b
Itgb8
Abca16
Atp5g2
Sesn1
Acyp1
Ufsp1
Trip6
Srrt
Nfia
Mbnl1
Schip1
Nin
Zic5
Frg1
Evx2
Lrrc66
Drc7
Brd1
Pknox2
Myh10
Mapk8
Maml2
P4ha3
Hoxd8
Slc6a1
Mapre1
Greb1
Phactr3
Rhbdd1
Cpsf4l
Fzd8
Map1b
6820408C15Rik
Calm1
Iglon5
Cnot2
Olfr1024
Nebl
Tox2
Olfr1037
Notch1
Ptn
Spink1
Dock3
Oacyl
Rasgrp3
Tmigd1
Wdr18
Elavl4
Arhgap15
Cd83
Dnm3
Tpbg
Ivd
Fam234b
Tmem200b
Ncoa5
Rasal2
Vwf
Fau
Nps
Lrrn3
Speer4a
Slain1
Dap3
Katnal1
Mfap3l
Tnfsf8
Cd47
Art3
1700010B08Rik
Tcim
Phf6
Gm4791
Kcnip1
Lama5
Lpgat1
Sprr2i
Gpr45
Zfp710
Dach2
Skap2
Slc32a1
Ubqln2
Exoc2
Arpp21
Tbc1d9
Lrrtm2
Neu2
Ngef
Nlgn1
Stk10
Nr0b1
Lrmp
Mink1
Wdr47
Irx1
1700012A03Rik
Crppa
Gcnt2
Scn1a
Ppp2r2d
Mapk1ip1
St8sia4
Rapgef6
Pik3c2g
Fbxw7
Tub
Cbfa2t3
Slc6a5
Gprc5d
Cited4
Tanc1
Grm5
Ccdc162
Vta1
Frem1
Armc5
9130023H24Rik
Cldn34d
Krtap13-1
Gm527
Atp8a2
Pdzph1
Olfr1098
Ammecr1l
Sox21
Mapk9
Nr2f1
Mpv17l
Pdxdc1
Actr3
Tmem156
D430041D05Rik
Arid5b
9430069I07Rik
Ddi2
Stxbp5
Sptssa
Pkd2l1
Ptpn6
Grcc10
Bzw1
Coq10a
Ankrd52
Gm5127
Gja1
Vapb
Rph3al
Tmem53
Hoxa7
Hoxa3
Slc25a39
Xpr1
Tph2
Mmp28
Myom3
Cox7a2l
B3galt2
Bmp1
Ncoa7
Mitf
Tle3
Myo5a
Stk33
Sv2b
Galr3
Snca
Gse1
Scgn
Fign
Eif4e3
Maml3
Neurog2
Zfp516
Sox2
Tmem126b
Tmem126a
Stxbp6
A530016L24Rik
Elf5
Rprm
Cubn
Gm27021
Emc8
Cox4i1
Barhl1
Pex5l
Ins1
Slc39a2
Mettl17
Olfr1034
Etfbkmt
Mad2l1
Fam241b
Ush2a
Rprml
Lyzl6
Zfp663
Nfib
Lpar6
Cybc1
Narf
Eya2
Hhip
Tmem260
Hmcn1
Uchl4
Prrc1
Prop1
Olfr1378
Olfr806
Prkar2a
Nol4l
Ap3b1
Srsf10
Pnrc2
Dad1
Abhd4
Vdac2
Tob1
Cdx2
Arhgap28
Sobp
Gpr160
Ntn1
Srsf9
Ptger2
4930447A16Rik
Olfml1
Utp11
Nedd9
Slc18a2
Rab28
Pax6
Usp4
Gpx1
Bmpr1a
Med27
Zyg11b
Abhd6
Plcb4
Unc93a
Angptl4
Rab37
Crybg3
Percc1
Ccdc154
Wnt5a
Meiob
Pou3f3
Man1a2
LTO1
Dpysl3
Dcc
Gsx2
Lysmd3
Dpf3
Morf4l1
Ugcg
Unc93a2
Adgrl2
Pccb
Ebf1
P4ha1
Tubb6
Pla2g2d
Foxb1
Pigw
Myo19
Ggnbp2
Lrfn2
Cdk17
Ngdn
Polr2m
Qsox2
Celf4
Ccno
Nap1l4
Stk38l
Nrp2
Rgs3
Irx5
Mad2l2
Draxin
Sema4b
Treml4
Gtf2ird2
Ubtd1
Mms19
Atp9b
Nkx2-6
Tspan5
Snx7
Hs3st4
Dct
Ccdc171
Fscn2
Actg1
Rhcg
Arid1b
Apela
Srprb
4930550C14Rik
Mprip
Cd40lg
Ccl7
Ccl2
Fam181b
Megf10
Map2
Tal2
Gna13
Smarcal1
Fam181a
Olfm1
Sox5
Pard3
Trim59
Slc38a2
Sdc1
Pla2g2e
Gm13030
Trim2
4933424G06Rik
Slc4a8
Zfp473
Vrk3
Ddx6
Akap8l
Hsbp1l1
Wwox
Hoxd9
Meox1
Tcl1
Cmtr1
Alox5ap
Mrvi1
Ing3
Ccn1
Zfp326
Susd1
Rnf220
Cntf
Zkscan1
Kcnip4
Manbal
Cd9
Lama3
Ccdc60
Degs1
Ttyh3
Ivl
Smcp
Hspa14
Cdnf
Zfp703
Stn1
Ust
Srgap2
Fam72a
Parm1
Lars2
Adnp2
Dip2c
Smim11
Kcne2
Kazn
Spred1
Flrt1
Cyp51
Rps29
Ormdl3
Lrrc3c
Aebp1
Hivep2
Lce1h
Lce1g
Lmo4
Zc2hc1a
Gga2
Kbtbd12
Piwil4
Tmem132d
Cda
Stk32a
Ccdc167
Gm14137
Gchfr
Hnmt
Extl3
Gm12657
Plaa
Mycl
Casz1
Thbs1
Spink7
Ttr
C8b
Uap1
Pitx2
Lipo4
Lrig1
Rab30
Ndfip1
Id1
Tcf12
Entpd6
Smim8
Plch1
Ctif
Stab2
Top2b
Lpo
Actr3b
Fgfr2
Sp9
Unc13c
Tti2
Atrn
Hapln1
Ttc39b
Gm3985
Irs2
Nmnat3
Nrxn3
Glis1
Arhgap36
Fbxo16
Gphb5
Clptm1l
Bahcc1
Ttc21b
Acot7
Golgb1
Eaf2
Nek7
Havcr2
Setd4
Cbr1
Spp2
Sema6b
Lrg1
Mgat5
Rab20
Skida1
Mllt10
Gsg1l2
Glp2r
Slc39a11
Ppp1r9a
Vamp9
H4c11
H2bc14
Ptger4
Rnf125
Nup107
Gnb5
Mtnr1b
Plcz1
Capza3
Pik3r4
Hoxb9
Slc30a5
Trhr
Slc17a6
Mettl2
Smg9
Emcn
Marchf10
Slc14a2
Plppr1
Fam107a
Myoc
Ago1
Arfgef3
Naa11
Gm4737
Klhl5
Eya1
Acsl5
Pdia5
Dpyd
Plpp7
Tbcel
Clstn2
Rundc3a
Itpk1
Ezh2
Gtsf1l
Col25a1
Rbm25
Fam135b
Ascl1
Zfp42
Sh2d3c
Cdca7
Aadacl2fm1
C330018D20Rik
Taar2
Zup1
Zfhx4
Olfr891
Nr3c2
Olfr1441
Scrn1
Gm18905
Gm15517
Acp4
Slc9a9
Lrp4
Reln
Dact2
Cog6
Crb2
Med13l
BC005537
Nipal3
Purb
1700019D03Rik
Nrp1
C1qtnf2
Fstl5
Fhdc1
Cdh7
Exoc4
Tox3
Nxph1
Myf5
Fam110a
Tnfrsf21
Foxd3
Tubb2a
Pdzd3
Nlrx1
Gm5544
Zbtb20
Nsmce3
Gucy1b2
Nxpe2
St7
Dlk1
Atp10b
H2-M11
Macrod1
Gtf3a
Cox20
Akap6
Hhat
Lhfpl2
Hlcs
Il31ra
Atxn7l3b
Washc4
Aldh1l2
Kpna1
Rpgrip1l
Fto
Jam3
Cwc27
Tlk1
Apcs
Jazf1
Pex2
Megf9
Mrps36
Adamts16
Git2
Ankrd13a
Izumo3
Rps10
Mdh1b
Fastkd2
Lrrc4
Gal3st1
Vmn1r53
Ccbe1
Zfp143
Baz2b
Lpin2
Dpysl2
Nipsnap1
C2cd4a
Agmo
Rps14
Cep85l
Arg1
Gpatch2l
Slc1a3
Kbtbd11
Tcirg1
Phox2b
Cyp1b1
Cibar2
Nell2
Pakap
Zfp397
Apold1
Runx2
Dnaja3
Coro7
Tent5c
Zfhx2
Thtpa
Thsd4
Skap1
Traf3
Rere
Ajm1
Neurog3
Rasgrp2
Lrrc15
Dthd1
Ajuba
Fbxo8
Cep44
Erg
Acvr1c
Tle1
Krt9
Pik3r5
Pcgf5
Ddx20
Inka2
Cfl2
Arsj
Sybu
Camk4
Iqca
Olfr1097
Capn8
Kcnt2
Lrch3
Lhx4
Kcng4
Irx6
Krt13
Ythdf3
Sall1
Tom1l1
Jam2
Sema6d
Tmem255a
Etv3
E130308A19Rik
Sav1
Rag1
Slc43a1
Ptprr
4933402D24Rik
Elmo2
Gm1979
Ireb2
Poglut3
Trerf1
Armcx1
Hand1
Zc3h12c
Ppp1ccb
Wdr49
Cnga3
Trmt2b
Pcnx3
Map3k11
Zdhhc7
Lrrc4c
Nnt
Fam171b
Ifna9
Sstr5
Nptx2
Hibadh
Enpp3
Rtn4rl1