ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416194 | Embryoid Bodies
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◢ SRX7416180: Embryoid Bodies

◢ SRX7416181: Embryoid Bodies

◣ SRX7416194: Embryoid Bodies

◢ SRX7416195: Embryoid Bodies

◢ SRX7416203: Embryoid Bodies

◢ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Ackr4
Riox2
Srpx
Snrnp27
Mxd1
Ddx1
Gpr84
Efcab5
Alb
Hoxd4
Hoxd3
Nkx6-1
Prdm13
Hoxa4
Palld
Scube2
Ubl4b
Bend4
Rtl1
Aldh1a2
C1ql3
Gnat3
Met
Acsf2
Srsf6
Hoxb6
Hoxb5
Hoxc4
Hoxc6
Hoxc5
Cacna1c
Rarb
Mafa
Ndnf
Gm973
Pdgfc
Il20rb
Dcbld2
Dnah5
Efnb2
Pdlim5
Map4k5
Atl1
Eps8
Epb41l4b
Hoxc8
Dmrta1
Gas1
Nrg1
Dtx4
Hdx
Clvs2
Lsamp
Pou3f2
Hoxa2
Hoxa1
Atp5g2
Crkl
Cep128
Hoxb4
Hoxb3
Zfp330
Tox
Lrp12
Pkdcc
Atp1b4
Cacna2d1
Zc2hc1c
Tbc1d22a
Dph5
Ccdc33
F11r
Ccdc171
Vwf
Lrrc18
Kif13b
Utp11
Marchf3
Vta1
Pou2f1
Hoxa6
Hoxa5
Cldn34d
Epha5
Hoxd8
Tra2b
Lhx1
Nkx2-2
Rnf220
Smad1
Ttc30a1
Pou3f3
Fam174a
Gucy1a1
Dll1
Cacnb2
Kcnip1
St3gal2
Zfp503
Hoxa7
Hoxa3
Lrrn1
Otp
Zfp326
Hoxb8
Hoxb7
Gtf2a1
Foxn3
Pknox2
Synpo
Fam181a
Zdhhc2
Olfr1441
Ptger2
Mllt3
Prkar2b
Krtap19-2
Krtap19-1
Neurog2
Mrpl36
Csrp3
Plxnc1
Slc31a2
Pbx1
Rab19
Slc37a3
Lrfn2
Abca16
Sox21
Rasgrp3
Tle3
Arglu1
Hsdl2
Map1b
Pbx3
Tob1
Dnajb13
Cnga3
Polr3gl
Lix1l
Ankrd34a
Dbx2
Arfgef1
Gfra3
Slc27a4
4933424G06Rik
9430069I07Rik
Plcb4
Csrnp3
Sptssa
Spag17
Mcub
Ffar4
Ifrd1
Nr2f1
Pgm2
Cited2
Lpar6
A530016L24Rik
Hoxd9
Foxp1
Tecta
Tmem144
Sdc1
Grm5
Sgcd
Hipk3
E030030I06Rik
Raet1e
Raet1a
Sesn1
Cxcl12
Cox7a2l
Hnrnpa1l2-ps2
Ugcg
Ccn1
Gm14092
Ece1
B3galt1
Niban1
Myo10
Mecom
Wdr47
Zadh2
Tshz1
Mbp
Tnfsf8
Ociad2
Hibadh
Olfm2
Rtn1
Pik3cg
Bahcc1
Enpp3
Lep
Myo1d
Cradd
Lrguk
Sv2b
Notch1
Nrp1
Brd1
Calcrl
P4ha3
Neurod4
Tnfrsf21
Uap1
Cemip2
Tmem200b
Rgs3
Copz1
Usp15
Skap2
Wdr49
Htr3b
Bard1
Olfr1024
Atp9b
Ptger4
Txndc11
Maml2
Dthd1
Olfr646
Frg1
Psd3
Gda
Apela
Ogfod1
Nudt21
Prmt3
Zc3h12c
Exoc4
N4bp2l1
Ncoa7
Krt222
Rap1gds1
Ankrd6
Gprc5d
Fgd3
Nfib
Ncoa5
Wnt5a
H2-Q9
H2-Q7
Glp1r
Angptl7
Prop1
Olfr1378
Gtf2h4
Clasp2
Trib2
Mier1
Wdr78
Tspan5
Fgfr2
Fscn2
Actg1
G2e3
Gcnt2
Tmem263
Fhl4
Slc22a1
Cntnap2
Tjp2
Wdr95
Hhat
Mapk8
Mrvi1
Fbxo28
Lemd2
Ndufc2
Gsx2
Capn8
Slitrk6
Epb42
Mad2l2
Draxin
Pou1f1
Hnmt
Plpp6
4430402I18Rik
Oacyl
Irx5
Uchl4
Trio
Mbnl1
App
Map6
Slc6a1
Lysmd3
Tmtc4
Ubqln2
Vapb
Prss48
Hand1
Scn1a
Srprb
Nfia
Myh10
Fbxw7
Mei4
Tmco5
Krtap13-1
Zfp663
Cd47
Dad1
Abhd4
Pgbd5
Trim59
Olfr298
Calm1
Trim2
Asxl3
Colca2
Phf6
Slc5a12
Ubtd1
Mms19
Gna13
Hsd17b3
Ammecr1l
D430041D05Rik
Krt23
Rps6kc1
Kcnt2
Gpc6
Zbtb20
Sox2
Ppp2r2d
Mapk1ip1
Arid1b
Phlpp1
Pkd2l1
Olfr898
Rbp2
Slc32a1
Lce1h
Lce1g
Cadm1
Adtrp
Lpp
Tox2
Pax8
Atp8a1
4933402D24Rik
D6Ertd527e
1700012A03Rik
Arsj
E130308A19Rik
Radil
Cmss1
Gp1bb
Runx2
Mnx1
Xpr1
Crp
Crb1
Eif2ak4
Gpr176
Angpt2
Lpo
T2
Gdf10
Tle1
Tmem268
Atp6v1g1
Mdga1
Rhbdd1
Rpgrip1
Gbx2
Tub
Mrps33
H6pd
Btg2
Adh5
Atp8a2
Teddm3
Akain1
Map4
Tnfsf13b
Kcnip2
Tspyl5
Ptprd
Sall1
Kifc3
Treml4
Klhl5
Prickle2
Ufsp1
Trip6
Srrt
Cpsf1
Sp9
Shisa3
Erc2
Gm527
Zfpm2
Naaladl2
Jakmip2
Plcz1
Capza3
Scrn1
Cubn
Tmem260
Gpr45
Fgf13
Krtap28-13
Mta3
Camk4
Pof1b
Rara
Txlng
Sybu
Kitl
Mpzl3
Comtd1
A430057M04Rik
Nap1l4
Spen
Atic
Elf5
Cul3
Tox3
H4c11
H2bc14
Adgrl2
Foxp2
Grid2
Abcc4
Art3
Med13l
Nlgn1
Unc93a2
Stxbp6
Olfr572
Olfr571
Lratd2
Flrt1
Cxxc4
Phactr3
Ptn
Hhip
Prickle1
Esrrg
Etfbkmt
Olfr1037
Nap1l1
Rfk
Frmd4b
Gm5544
Nrxn3
Rnase12
Rnase11
Tmem184a
Psmg3
Cdx2
Bcar3
A930009A15Rik
Rgmb
Syk
Gria4
Ebf3
Gjc1
Arl4c
Cct8
Frem1
Ezh2
Dhx8
Mgat5b
Kpna1
Gm5127
Zfand3
Manbal
Pla2r1
Gpx2
Dach1
Rbfox2
Gm4951
Phox2b
Hs3st3b1
Aff3
Mapre1
Nin
Ppp2r3a
Lrrc15
Rasal2
Zfp710
Rab22a
Fyn
Celf4
Olfr891
Nebl
Lars2
Baz2b
Gpr160
Med27
Mfap3
Fam114a2
Mtif3
Dap3
Ebf1
Ebag9
Ntn1
Cd3g
Cd3d
Nme6
Pitrm1
Slc26a8
Mapk14
Pdzph1
Map2
Gse1
Prkar2a
Slc4a8
Atrn
Myom3
Gca
Hoxb2
Zfhx4
Nav2
Lpar4
Higd1c
Smug1
Gm4737
Crabp1
Ccdc187
Lrrc66
Phc2
Schip1
Arpp21
Dach2
Crybg3
Smim11
Kcne2
Sobp
Gm9949
Adrb2
Itsn2
Arhgap26
Zfp811
Hs3st4
Il1rn
Tmem53
Thumpd2
Kpna2
Lrrn3
Vamp9
Golgb1
Eaf2
Bicd1
Dnm3
Angptl4
Msrb2
Vmn2r23
Sstr2
2700062C07Rik
Pcdh19
Man1a2
Rab27a
Pde10a
Gm21698
Gm21671
Gm21663
5031410I06Rik
Rnf125
Arid3b
Ech1
Hnrnpl
Kazn
2510009E07Rik
Zyg11b
Nxpe4
Tbc1d5
Jam2
Ksr1
Zfp143
Mafb
Grik4
Rbm20
Ptprr
Hspa14
Cdnf
Nostrin
Apbb2
Trerf1
Evx2
Cyp19a1
Rapgef6
Ncam2
Cpb2
Skida1
Cd9
Mllt10
Git2
Ankrd13a
Bmpr1a
Rorb
Mad2l1
Pik3r4
Nkx2-6
Otor
Runx1t1
Hlcs
Fcer1a
Fam71e2
Tnpo1
Il31ra
Fzd10
Cyp4f17
Lrrtm2
Dip2c
Tnrc6b
Cntn1
Serpinb8
Pik3r1
Fam222a
Twist1
Dtna
Pou4f1
Tcf12
Fstl5
C2cd4a
Rag2
Iftap
Ttc39b
Ccdc182
Tbc1d9
Aktip
Celf2
Alox5ap
Txk
Olfr519
Bcap29
Entpd5
Bbof1
Ythdf3
Kank1
Katnal1
Olfr960
Hapln1
Zfc3h1
Thap2
Fzd8
Pde1a
Kansl1l
Cyp27a1
Vgll1
Pcgf5
Lman1
Pabpc1
Gtf2ird2
Plpp7
Tpbg
Zfp703
Cryzl2
Purb
St7
Fgf10
Tcim
Elf2
Arid5b
Srsf9
Clstn2
Fam171b
4930550C14Rik
Smc4
Ift80
Stra6l
Gli2
Tshz3
Rgs21
Plch1
Itgb8
Pik3c2g
Dcc
Thbs1
Elavl4
Spink1
BC005537
Fasn
Megf10
Cyren
Fgfr3
Lect2
Mab21l2
Mtx2
Pdzd3
Nlrx1
Mmrn1
Mdm2
Slc17a6
Olfr1034
Serpinb2
Invs
Erp44
Gm14137
Gchfr
Dbx1
Olfr1
Ubqln5
Ubqln3
Adh1
Clmn
Igsf9
Adamtsl3
Gm29797
Meis2
Med4
Slc44a3
Zfp9
Dmrt3
C6
Nipsnap1
Sema6d
Tbx15
Reln
Spg21
2810006K23Rik
Mn1
4930447A16Rik
Ciao3
Lyrm9
Ccl7
Ccl2
Epdr1
Skap1
AB010352
Asic4
Nxph1
Cavin4
Ldlrad3
Fam241b
Pitpnc1
Psmd12
Uri1
Rhcg
Ccdc174
Spag9
Map3k7cl
Ctnna3
Sema4b
Zc2hc1a
Arhgap15
Gdi2
Elovl5
Psme4
Tph2
Hpdl
Sncaip
Gm4791
Wnt1
Ddn
Zeb2
Fam126a
Rprml
Lyzl6
Smim8
Stk33
Xlr3b
Pkp2
Uts2b
Crb2
Neu2
Ngef
Mettl2
Pdzk1ip1
Trim27
Stk32a
Hagh
Fahd1
Wipf1
Spink7
Irx1
Dlk1
Nedd9
Ddi2
Pakap
Acot7
Kcna4
Megf9
Pkhd1l1
Fam124b
Pax3
Sfi1
Eif4enif1
Abr
Zfp608
Rffl
Nepn
Gopc
1700113H08Rik
Rnf165
Nnmt
Ppp1r9a
Lrrc4c
Dct
Pccb
Meox1
Mrgbp
Bcas1
Phf10
Slc25a39
Nipbl
Rundc3a
Bbs2
Uaca
Ing3
Mtnr1a
Prkab2
Ccbe1
Stk38l
Olfr172
Tanc1
Ap3b1
Cited4
Lyz1
Wfdc6a
Eppin
Greb1
Slc24a1
Ints14
Foxb1
Tlk1
Mtnr1b
Klhl1
Ascl1
Pde7b
Oxnad1
Dph3
Agtr1a
Dcp1b
Gja1
Skil
Dpyd
Extl3
Olfml2a
Nr6a1
Wt1
Olfr599
Olfr598
Olfr597
Zup1
Aldh1a3
Mmp28
Iqsec1
Ajuba
Id1
Lama5
Zfp933
Ccdc162
Cdh12
Lrch3
Lhfpl3
Bzw1
Cep85l
Pde9a
Adgrl3
Gpr37
Atxn7l3b
Muc4
Apob
Iglon5
Fezf2
Ubl3
Opcml
Uncx
Qsox2
Sc5d
Kcnj16
Zdhhc7
Nup107
Ncaph
Itpripl1
Stxbp5
St18
Micu1
Gnb5
Galr3
Cwc27
Fau
Lrrc70
Unc93a
Atp10b
Bcl2l10
Kctd4
Gabrg1
Mrpl23
Trhde
Hepacam
Gm28729
Mysm1
Mpv17l
Pdxdc1
Cfl2
Nipal1
Cnga1
Tia1
Eya1
Smim18
Abl1
Rab28
Sox5
Lpin2
Bicral
Mroh5
Mib1
Qrfp
Bcor
Havcr2
Dab1
Nbdy
Kcnj3
Fis1
Erich6b
Camsap2
Sytl2
Glrp1
Cxcr4
Pcnx
Ptf1a
Got2
Exoc2
Tmigd1
Mycl
Zfp423
Slc26a7
Ndn
Drc7
Ireb2
Pla2g12b
Olfr1337
Rgcc
Ror2
Cobll1
Msl2
Muc16
Nsfl1c
4921509C19Rik
Tcaf1
Paip1
Socs6
Stard13
Fam107a
Clec7a
Dctd
Olfr1385
Hdac9
Tmem156
Kmt5a
Nek7
Rbm25
Armc5
9130023H24Rik
Samd5
Tes
Ttr
Meis1
Unc13c
Rb1
Psmd7
Prtg
Trmt2b
Gpn3
Fam216a
Ccdc136
Kbtbd12
Rps10
Tbce
Rcan2
Gna12
Myo1b
Cblb
Sgms1
Tfap2a
Actn4
Madcam1
Odf3l2
Dcdc5
Zfp473
Vrk3
Plcxd1
Cdh7
C330018D20Rik
Arg1
Pkd1
Meis3
Polr2m
Usp4
Gpx1
Prrxl1
Rgs8
Dennd5a
Tpst2
Srbd1
H2bc1
H2ac1
Nptx2
Tubb6
Ccdc167
Snca