ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652957 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◣ SRX13652957: HeLa

◢ SRX13652958: HeLa

◢ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
DUX4
SNX12
ZNF76
POLR2J3
ZNF143
FRG2C
HSPE1-MOB4
HSPE1
HSPD1
GDA
ATXN7L2
DRAP1
C11orf68
NR4A1
FAM53C
CDC25C
HYAL2
DAGLA
KRT34
IL7R
ARRDC4
PDXDC1
C11orf86
MTRNR2L1
WDR74
ERCC1
PSMC3
OTULINL
HNRNPA2B1
CBX3
C5orf51
CSGALNACT1
NEK2
PTGES
OR10D3
BCAS1
TSR3
GNPTG
SLC35E2B
ZNF687
LIPK
CALM2
CD55
MARCOL
RCOR3
FGGY
ATF3
SETD1A
RPN2
MROH8
NNMT
HHIPL1
CCDC85C
SRI
LAMP1
RAPGEF1
FRG2
PSMA7
WASF2
METTL25
CCDC59
SFSWAP
TBL1X
UBE2B
CDKL3
CARD16
RIN1
PHKA2
HMG20B
DNAJC11
TXNRD1
RIPOR2
ATG101
FOS
ASB2
TSN
GPR137
BAD
CUL2
BIRC3
PDE4D
CDON
STX16
PPP1R13L
POLR1G
SLC39A13
GKN1
CPA4
LOC388282
KIFC3
HARBI1
ATG13
SNX15
PPP5D1
CALM3
DYNC2I2
TSC1
GFI1B
RHCG
GLIS1
IER3
FLOT1
CRBN
DKK1
MRPL48
SLC25A25
NAIF1
EIF2D
NAGPA
CALM1
SUMF1
MFSD12
YY1AP1
DAP3
BAZ2A
PMVK
COQ7
FHL2
TXNIP
PAIP1
H4C12
GFM1
GBA
SENP1
PFKM
KLRC2
XPO7
TSFM
COA6
CETP
ATP6V0C
HES1
BRIX1
CYP1B1
WDR43
NADK2
CLTC
SLC25A29
MAZ
H4C14
H4C15
ZNF341
ARID2
RAB22A
ZDHHC6
VTI1A
FAM156B
FAM156A
PDK4
SAMD9
IL24
SLC39A10
BIRC7
UBQLN1
LOC102723996
ICOSLG
CMSS1
S100A16
KRT80
LIFR
BZW2
ANKMY2
SEPTIN7
PRKCZ
PTP4A1
PLAU
NR6A1
PPIB
OAS1
PLIN3
TNRC18
EIF3F
SPNS1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GIPR
S100A2
ITPRIP
GTF3C5
LRRC37A3
TAGLN2
NYX
AP1G1
DOLPP1
TIMM22
CITED4
WARS2
ROBO1
GCN1
IQCH
AAGAB
KIF27
DNAJB12
GNAS
WDR25
WARS1
PXK
POC1A
ATL2
CWF19L1
AGAP11
ADIRF
UBB
CHD2
LMNTD1
DGAT2
ARFGAP2
CDH13
LSG1
NRAS
PARK7
CD59
TMEM185B
AMDHD2
OSMR
GPRC5A
WASHC2A
LIMS1
TRUB2
COQ4
BRPF1
KMT2D
MGAT5B
TSR2
CDCA7L
FCHSD2
CDKN1C
ZNF408
ARHGAP1
HNRNPF
ZC3H6
LANCL2
MEF2D
ISY1-RAB43
ISY1
WDR13
CDIN1
EIF4A2
GIT2
ANKRD13A
FBXO46
SYBU
RIMBP3C
RIMBP3B
WDR70
NBN
ZNF335
CHMP7
KLF1
GCDH
PER1
H1-2
USP15
TEKT2
ADPRS
PLCXD2
BLM
PUS10
PEX13
BRWD1
UBC
CNOT6
NMUR2
DDX17
TIGD5
EEF1D
SURF6
ASPSCR1
SRSF3
CDKN2C
NUP155
MARCHF6
SSBP1
DPH7
KPNA7
CDIPT
S100A13
CHTOP
WDTC1
PTCD3
POLR1A
PLEC
LIN7C
ALG1
C19orf33
DUSP5
SSNA1
ANAPC2
NOL8
CENPP
ASB6
HNF4A
ERICH4
DMAC2
LRPPRC
STRBP
COA1
EIF2S3
SLC48A1
FOSB
ZFAND3
ETS1
CDK9
FUT11
BCL6
H3C15
H3C14
H2AC19
H2AC18
MYEOV
VPS33A
TRMO
HKDC1
KRT8
RBM24
VPS50
HEPACAM2
ATAD2
RPL26
ZNF668
ZNF646
PLEKHA8
FKBP14
MSLN
SPRING1
RNFT2
STPG3
NELFB
PDZK1
STK17A
RBM8A
VGF
GSG1
TADA1
ICE1
FBXO4
TMEM9
TSKU
SERTAD4
ELFN2
POR
INAVA
SURF4
DDX46
PI3
IBA57
ITGB3BP
EFCAB7
MAOA
DNAJC9
SLC9A1
PARVA
SPATA46
C1orf226
COG2
POLR2J
ATG16L2
KAT5
RELA
SLC25A53
AMOTL1
SLC6A18
PRRC2B
ACCS
TRIM44
TMC5
CIDEC
PPOX
CLCN7
YAP1
MYL12A
CDK5RAP2
NUF2
SH3BP4
TRIB1
LY6K
TMCC1
GABARAPL1
ROBO3
CENPN
E2F8
CIZ1
PLAAT2
NUDT3
ATF7-NPFF
ATF7
TRAM1
EIF1AD
BANF1
PHF19
SLC20A1
PDHA1
SMG7
PHF1
TES
RFX1
POLR3B
C21orf91
AAAS
HRH1
CCL20
CLPB
GSN
USP2
WNT1
THEM4
ARHGAP17
TMEM170A
PTPN6
C12orf57
PRDM11
FANCD2
OGA
SPINK1
CCNT1
CCT5
ATPSCKMT
ILF2
RALGDS
LMNA
INKA2
DDX20
DDX5
CEP95
ALDH18A1
CYCS
ZNF219
TMEM253
AVPI1
RPL37
STX1A
GPATCH3
JRKL
CCDC82
RASSF9
PRSS27
PIMREG
SMC3
RAPGEF3
HERPUD2
PIGO
AFF1
ZFX
FAM76A
TAS1R1
NOL9
KRBA2
CSTF1
AURKA
PMPCA
ENTR1
NUP160
AGTPBP1
TMEM107
TCERG1
STK35
MYL12B
ETV6
DPY19L4
H4C8
H2AC16
H1-5
DNAJB1
H3C11
LIMA1
SLC7A5
GYPC
ZBTB26
COMMD6
IRF2BPL
PDE6D
COPS7B
SEMA3B
TRIP13
BRD9
ARAF
CCDC97
ECT2
ZSCAN32
ZNF174
HDGF
ZC2HC1C
ACYP1
TSEN54
CASKIN2
CFAP20
CCDC124
SREBF1
EDC4
PTGER4
AKIRIN1
SRSF4
APOLD1
H3C12
H2BC17
H2AC17
EIF3C
HAGH
FAHD1
SLC8A1
INTS7
DTL
PYGO2
LOC101928120
IFT52
OXR1
NR2F2
LRP6
PPEF1
WDR5
GATA2
FUS
ARID3B
RNF103-CHMP3
RMND5A
DTWD2
ZCCHC4
RSAD1
RXYLT1
NDUFB1
CPSF2
KNTC1
ISG20
BNIP1
PPP1R37
STX18
CENPH
PPP1R10
MRPS18B
HPDL
FAM102A
POLA1
RPLP0
MRPL27
EME1
NVL
PFKP
SYNC
SP1
NQO1
HR
SLC33A1
USP36
INA
SIRT4
MRPL21
IGHMBP2
PLD6
MCOLN1
MARK1
DNM2
PHF23
GABARAP
NCOR2
NRM
PPP1R18
NFX1
NR1D2
NKIRAS1
ATR
CKAP2L
CLN3
APOBR
POLD2
VPS13C
C2CD4A
PTGES2
TACC1
CDKN1B
SIRT1
CKAP5
PPIL4
JUNB
DISP3
PRR5L
AURKAIP1
UQCRC2
EBAG9
SKA2
PRR11
FRMD3
UBE2C
SNAPC5
ADK
RDH5
ITGA7
BLOC1S1
TGM2
HAX1
CLPTM1
CDC14C
HSP90AA1
CRIP1
TEDC1
SYT7
ATAD3B
H2BC5
H1-4
HEXIM1
SCAND1
JUND
RHOBTB2
SCRIB
LMAN2
NDUFS3
KBTBD4
PRKCI
WASHC2C
NME1
GTF2IRD2B
GTF2IRD2
SDE2
THUMPD1
COMMD9
PCBP2
TEX12
IL18
PIP5K1A
GUCA2A
PPP3CB
DMPK
JMJD1C
SLC35B1
EFCAB2
USP9X
HNRNPH1
FZD1
MIA3
HMGCS1
CENPS-CORT
CENPS
SAMD4B
TMEM41A
RPS26
CCDC34
OXCT1
ATP8A1
SAYSD1
TEAD1
KIF1C
INCA1
P4HB
NARF
ALG10B
CACTIN
DNLZ
HIF1AN
UBE2I
DICER1
SLC41A3
LPIN1
CEP63
ANAPC13
DEDD
MAP2K1
ZNF239
MXRA7
PTDSS1
MTERF3
POLR1H
SREK1
CBLC
RUNX1
MRM3
GLOD4
NAP1L4
SYNRG
ZFYVE26
RAD51B
SLC2A6
ARL8B
MBTPS2
NDRG1
UNC5B
TM4SF19
ZNF131
HEMK1
C3orf18
KLHL15
SLC25A45
FRMD8
C8orf33
ACOT9
MAD2L2
TARS1
LOXL4
NAPA
CPA2
VPS52
RPS18
RAD9A
B3GALT4
GTPBP3
ANO8
PXMP2
POLE
DDX18
USP49
RPGR
CDC73
TLE1
RPL17-C18orf32
RPL17
C18orf32
NDST2
C1orf198
KIF21A
COPS7A
TTLL6
SMPD1
PREPL
CAMKMT
SRSF6
RTF2
JPT2
ZFAND4
PPRC1
RAB27B
MGLL
TOB1
MRPL33
RBM48
PEX1
RAD51AP1
C12orf4
UBIAD1
SRXN1
STK19
DXO
BBS1
TMEM267
PDE4DIP
RBBP5
MEX3A
HSD17B10
PRDM10
NIBAN2
PSMD4
NOL11
MAPKAPK3
CISH
FBXW2
U2SURP
TPM4
FAF1
RANBP2
RPL13
MKRN2OS
MKRN2
SLC44A1
PIP5K1C
DOHH
NPW
CNTRL
C5
RRP1
CTR9
PSRC1
MMP24OS
MMP24-AS1-EDEM2
UBP1
TM4SF4
TBC1D10C
PPP1CA
PUF60
TMEM138
CYB561A3
SLC25A10
LPCAT3
KRT7
GUK1
ZNF212
RHOT2
TMEM222
RPL5
FOSL1
MEAK7
RXRA
OTUB2
UTP18
MBTD1
ZBTB8OS
RBBP4
EIF4A1
VEZF1
VPS26A
MAPRE3
AP3S1
RCAN1
PRDX1
UQCC1
TTC5
MTRR
FASTKD3
VDAC2
LRCH4
FBXO24
CUL7
SLC24A1
PARP1
ANK1
POLDIP3
FBXO11
ZC3H7A
USE1
VPS37A
CNOT7
UPP1
SEC16A
C9orf163
ZNF438
KLRK1
FRAT1
C1orf174
HDAC6
SIDT2
NR1H3
ACP2
DPAGT1
C2CD2L
HNRNPA0
EEF1E1
ARAP3
CRKL
MT1X
NADK
PIM2
MYO9B
HAUS8
CENPF
HMCES
CELF1
CELSR3
SNRPC
GPKOW
MRPS22
POLG
TCAF2
KRT32
PCIF1
STAT3
SQSTM1
ARHGEF1
PPWD1
CENPK
CDKN1A
SAP30BP
RECQL5
HMBS
ATAD3A
VEPH1
G3BP1
RBM4
GPR156
IFT140
CRAMP1
ATXN1
PEX5
KRTAP20-4
AARS2
DPP3
CCDC200
SNX19
MRPS28
PICALM
DDB2
NOC3L
FDXACB1
C11orf1
ATP6V0D1
AGRP
ILF3
TMEM101
RNF13
PIK3R3
PAXIP1
PTPN14
NOC4L
DDX51
COL16A1
SNAI1
PRKAB2
CHD1L
ZNF503
RAB5IF
IFRD1
LRRC8C
DGKH
ZBTB45
SLC35E1
ASH1L
NUP214
KCTD5
ANKRD36
DENND4B
AQP5
JRK
TARDBP
TUBB
MDC1
FAM71D
TDP2
ACOT13
SAR1B
ATP5F1E
DNA2
CHEK1
ROCK2
H2BC21
H2AC21
H2AC20
VPS33B
SPATA25
NEURL2
CTSA
MBNL1
MAP2K3
MTBP
MRPL13
RWDD1
CIPC
TUFM
SH2B1
ABCC3
MADD
SLC25A23
CRB3
RPL7L1
H4C3
H1-6
OCLN
EIF3B
ITGBL1
AXL
PPP2R3A
MARCHF8
ZC3H10
RPL41
OSGIN1
TOR4A
CYB5R2
DUSP1
CTTNBP2NL
PPP1CC
IQANK1
FAM83H
VCPKMT
LOC102724265
H1-3
DCLRE1B
AP4B1
NPIPB8
TK1
AFMID
TTC31
CCDC142
CLYBL
MRPL3
HSPA5
AHCY
CLCF1
ARHGEF18
KLHDC10
DDX41
TRIM55
NDUFS7
C2orf42
TCTEX1D4
BTBD19
AIFM2
TET1
MMP13
TRMT61B
TTI1
RPRD1B
MRPS2
C9orf116
HLCS
GJD4
CENPE
MRPL39
TTC21B
SP6
NDUFA4
C1QTNF1
ALG13
RABGAP1
NYAP1
ZFP64
H2AX
BMF
CCDC130
TM9SF4
HTATIP2
MED28
DDX11
MORF4L1
DDX23