ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652959 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◢ SRX13652958: HeLa

◣ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
FRG2C
DUX4
DRAP1
C11orf68
ZNF76
ZNF143
HYAL2
ATXN7L2
HSPE1-MOB4
HSPE1
HSPD1
POLR2J3
GDA
HNRNPA2B1
CBX3
IL7R
DAGLA
MTRNR2L1
HHIPL1
CCDC85C
ARRDC4
WDR74
PDXDC1
C11orf86
CSGALNACT1
FAM53C
CDC25C
ALDH18A1
SLC39A10
KRT34
FRG2
SLC35E2B
SLC39A13
WDR70
WASF2
SRI
OR10D3
DNAJB12
OTULINL
SETD1A
ATG101
ZC3H6
RPN2
MROH8
NNMT
PSMC3
ZNF687
CUL2
FOS
NR6A1
CD59
STRBP
FHL2
GLIS1
LIPK
ZNF408
ARHGAP1
SNX15
XPO7
NUDT3
GPR137
BAD
NR4A1
YY1AP1
DAP3
ATAD2
MYO9B
HAUS8
GKN1
DGAT2
CARD16
TSC1
GFI1B
METTL25
CCDC59
HARBI1
ATG13
DKK1
SPRING1
RNFT2
FAM156B
FAM156A
NEK2
GTF3C5
RHCG
RASSF9
DDX17
KAT5
TSR3
GNPTG
TBL1X
TSN
COX20
ATR
PAIP1
KLRC2
LOC388282
KIFC3
TEAD1
BCAS1
MRPL48
ATF3
ISY1-RAB43
ISY1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
WDR43
KLF1
GCDH
RALGDS
RAB22A
GYPC
WNT1
RAPGEF1
CDK5RAP2
MTCH1
TMEM41A
ERCC1
LRRC37A3
BRIX1
DNAJC11
PRR5L
PDK2
USP15
FGGY
NDST2
CRBN
GNAS
TSR2
C5orf51
PHKA2
BRPF1
EIF3C
SFSWAP
EIF3F
RELA
CD55
PER1
UBE2B
CDKL3
USP36
CALM1
PIK3R3
MARCOL
LOC102723996
ICOSLG
TBC1D13
EIF2D
CDON
GFM1
SEPTIN7
NUF2
UBB
C1orf174
WARS2
PSMA7
PDZK1
ARL8B
DYNLT3
LAMP1
KLHDC10
FUS
CYCS
NTMT1
HNF4A
BIRC3
IBA57
NADK2
STPG3
NELFB
CYP1B1
MAOA
PCBP2
JRK
SLC25A25
NAIF1
LANCL2
CALM2
SUMF1
METTL1
EEF1AKMT3
CYP27B1
C1orf198
NYX
TSFM
MRPL42
ARID3B
TIMM22
KRT80
DICER1
HRH1
PMVK
TES
CPA4
DNAJC9
SLC33A1
PRDM10
RRP15
PPP1R13L
POLR1G
HAX1
SSNA1
ANAPC2
GIPR
C21orf91
SDE2
ZNF674
EFCAB14
SLC25A53
USP2
POLG
TRMO
RPS14
FOSB
SAMD9
TADA1
DYNLL1
AMDHD2
TXNIP
ZER1
SSBP1
CDIN1
ZNF131
ATP6V0C
BIRC7
KRT32
KIF1C
INCA1
EIF4A2
NAGPA
GPRC5A
UBIAD1
FAM149B1
ECD
CDCA7L
TCAF2
VPS33A
CITED4
ASB6
GCLM
RCE1
BAZ2A
OGA
CEP295
TARDBP
TMC5
SPATA25
NEURL2
CTSA
TIGD5
EEF1D
SCAND1
CHMP7
PRKCZ
RPL26
LMNTD1
PARK7
LRP6
NUP155
RBM48
PEX1
SLC8A1
INA
PER3
WASHC2A
PPIB
SPNS1
DPH7
COA6
LRRC20
TRIM55
DISP3
AVPI1
UQCRC2
DYNC2I2
STK17A
ASH1L
ZNF219
TMEM253
FAM102A
NR1H3
ACP2
SPINK1
RIPOR2
FBXO4
ARAF
HAGH
FAHD1
AKR1B1
KAT8
TMEM9
PCIF1
IFT52
TCP11L2
NFX1
KIF21A
ICE1
AURKAIP1
PYGO2
LOC101928120
RRN3
MFSD12
COQ7
ZNF668
ZNF646
EED
TEX2
AAAS
PIP4K2B
UBE3C
TMEM132A
ETFBKMT
OSMR
PDK4
GUK1
TPRN
TMEM203
NDOR1
SOWAHC
SEPTIN10
MRPL44
MBNL1
MTRR
FASTKD3
SIDT2
DEDD
ATF7-NPFF
ATF7
EIF4G2
TMEM185B
NDUFS3
KBTBD4
HES1
FRAT1
FAM133B
U2AF1L5
U2AF1
TEKT2
ADPRS
PTDSS1
MTERF3
DOHH
ITGB3BP
EFCAB7
CFAP20
NDUFAB1
KMT2D
PRC1
SRPRA
ATXN2
H4C12
WASHC2C
USP49
TTC33
COPS4
CETP
NBN
KNTC1
MYL12B
ZSCAN32
ZNF174
SECISBP2
SSU72
IL24
TRIP13
BRD9
PCCB
GABARAPL1
PRPSAP1
NDUFS7
ING4
ATG16L2
STX16
H4C14
POR
ZNF335
RAD51AP1
C12orf4
RIN1
PPP5D1
CALM3
NME1
MARCHF6
PDE4D
DOLPP1
ZC3H7A
TMEM222
FBXW2
CNTRL
C5
CACTIN
UBE3B
KCTD10
PDCD6
SRCAP
LOC730183
COG2
CLPB
PINX1
EBAG9
SLC35E2A
MTBP
MRPL13
DAP
CPT1A
LPIN1
AP3S1
ATP5MC2
H4C15
CLTC
RAB27B
THAP12
GVQW3
GOLGA1
HSPA9
GBA
OAS1
RBM8A
PSMD5
GTF2H3
EIF2B1
GTPBP8
PRKCSH
CCDC151
S100A13
CHTOP
RRNAD1
ISG20L2
PRDX4
ASB2
PRKCI
STX1A
ISG20
RPAP3
ATL2
UBE2I
PLEKHA8
FKBP14
AARS2
ZNF367
PGBD2
SLC35B1
NIFK
NCOA5
POLA1
ZNF212
GRIPAP1
EPC2
FAM25G
FAM25C
IQCH
AAGAB
CCDC97
SLC25A45
FRMD8
C8orf33
NEGR1
ATP5MPL
TTC9C
HNRNPUL2
YIF1B
KCNK6
ARFGAP2
NARF
MTCH2
MRRF
EPYC
TATDN3
NSL1
PLCXD2
USP42
PRMT3
TMEM199
POLDIP2
GGA1
PDE6D
COPS7B
EFCAB2
RPL5
COA1
CENPF
POLR3B
SRSF4
USP11
PTGER4
CDKN1A
C19orf33
CAPN2
STAT3
NUDT9
GIT2
ANKRD13A
CHD2
USP9X
NR2F2
P4HB
ZBED5
TUBB4B
HMCES
SCAI
RARB
ZFAND3
TRIB1
MRPS23
HASPIN
STK19
DXO
LIMA1
MTMR12
UBQLN1
CEP63
ANAPC13
TPR
ODR4
ITGB1
ZDHHC6
VTI1A
SENP1
PFKM
ANKRD36C
ELOB
PGAP2
FCHSD2
EIF1AD
BANF1
IARS1
YTHDF2
MRPL3
TMEM14B
ITPRIP
PEX5
RNPS1
TRMT61B
DCXR
ZNF341
SLC48A1
LARP1
CAPNS1
QSOX2
PEX11B
LETMD1
YARS1
S100PBP
THEM4
RAB5B
GABPB2
ZNFX1
SH3BP4
TIMM10
TTC31
CCDC142
GTF2IRD2B
GTF2IRD2
DDX41
CPLANE1
CDIPT
TMEM107
MSTO1
TAMM41
TRUB2
COQ4
TSEN54
CASKIN2
VIRMA
PARVA
WDR5
ENSA
TTI1
RPRD1B
PEAR1
RPS26
INAVA
TRAM1
ECT2
MUC13
PTGES
RCOR3
HMG20B
NOL8
CENPP
NDUFB1
CPSF2
FBXO46
CCDC124
CLPTM1
CCL20
INPP4B
FOSL1
LIFR
SURF4
PPP4R3A
KDM4D
CWC15
PTGES2
AMN1
EIF2S3
RHOT2
TNRC18
SNX19
LZTR1
WDR25
WARS1
SPATA46
C1orf226
SERTAD4
SREK1
CLN3
APOBR
TMEM267
CTDSP1
SDHAF3
MEF2D
KLF10
CLUH
WASHC5
NSMCE2
NCBP2AS2
NCBP2
TAGLN2
PPOX
POC1A
MCOLN1
QRICH1
POLD2
ARID5B
SLC9A1
WDR13
AMOTL1
ARHGEF1
TMEM9B
GIPC1
NIBAN2
MRTO4
EMC1
TIMM17B
PQBP1
MAP3K1
DDX18
ETS1
VPS37A
CNOT7
BMS1
SCAF11
CCDC174
BRWD1
MRPS30
MRPS28
EPSTI1
S100A16
BACE2
SLC25A3
ZYG11B
CDK1
SUPT7L
SLC4A1AP
PRRC2A
AIF1
NCDN
KIAA0319L
WEE1
HNRNPAB
ZRANB3
R3HDM1
MAPRE3
OXCT1
HSP90AA1
SLC41A3
INTS7
DTL
DDX46
ASCC1
ANAPC16
RACGAP1
CIDEC
FZD1
LRRC8A
KYAT1
ARFGEF2
USP12
DDX59
SCYL3
CTNNAL1
SELENOS
POLR2J
CDK9
SMIM12
CCDC200
KATNB1
POLR2D
PXK
LMNA
OAZ3
C2orf49
MTF2
DGKZ
MLH1
EPM2AIP1
MELTF
RPRD2
TSKU
PFDN4
PTPN6
C12orf57
DPP3
BCO2
RPL24
USE1
SNRPD1
THUMPD3
TNPO3
NKD2
PTP4A1
AGAP11
ADIRF
CXorf58
C18orf63
PRSS27
OGFOD3
HEXD
PRRC2B
FEM1A
PHRF1
PAXBP1
S100A2
EIF3B
STK40
SUB1
POC5
UBC
CWF19L1
MDM4
STOM
PLIN3
NRM
PPP1R18
SQSTM1
ADK
RPGR
TOP3A
SMCR8
GPBP1
MFN2
JUND
RPL37
THUMPD1
TCF3
NOCT
SRP9
SNRPG
NIP7
COG8
DHX35
ATXN1
RNF103-CHMP3
RMND5A
COPS7A
CCNT1
PTPN14
KRT17
RPL38
RICTOR
RNF7
ZNF620
EPRS1
SH3GL1
CHAF1A
SLBP
IER3
FLOT1
PHF19
RCAN1
NSFL1C
CEP126
ANGPTL5
LOC100509620
SPIN1
CTCF
BMF
RSF1
AAMDC
OSBP
MSL2
IFT140
CRAMP1
SIRT4
MRPL27
EME1
TMEM170A
TMEM14C
ASNS
TBX3
DYNC1LI2
LY6K
NUP214
SRXN1
LSG1
AMHR2
CDKN2AIPNL
CRY2
TMEM39A
CCDC34
EPB41L5
TPRA1
GFOD1
ZNF181
UQCRH
LRRC41
NNT
BICD2
RHEBL1
HDAC6
HSPA8
C8orf58
NDUFS6
MRPL36
PPIA
ST6GALNAC4
DLX4
ACTR1B
HKDC1
CDH13
CSTF1
AURKA
CABLES2
FBXO33
SLC25A36
TMEM126A
MUL1
HEMK1
C3orf18
HNRNPH1
DCLRE1B
AP4B1
SF3A3
RXRA
LOC100287896
LIPT2
ST3GAL4
INTS1
ZSCAN16
DTWD2
DHX8
ARMH3
ATP8A1
ARMC8
GRN
GET4
PEX19
PAK6
MAP2K3
KCNK9
RUNX1
PHAX
BROX
AIDA
PBX3
MRI1
PDCL
EGLN1
GSTA4
C1orf53
INPP5E
SIVA1
TMC1
MRPL17
MMP13
LIMS1
ZFP64
PAXIP1
RALY
UBE2C
SRRM2
IPO11
ENAH
UMPS
PLAU
CIZ1
SMG7
TMEM18
PUSL1
ACAP3
KLHL15
H2AX
COA8
BAG5
LARS2
CLDN16
TXNRD1
SUPV3L1
HPS5
GTF2H1
CDIP1
PDE7A
HERPUD2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
MYBPC3
SLC25A23
CRB3
ZNF286A
MITF
MAZ
BNIP1
CTSS
RUVBL1
SMAD3
CLUAP1
C16orf90
TUFM
SH2B1
ABCC3
SH2D3C
PDCD6IP
MAPK1IP1L
XRRA1
SPCS2
ZFAND2A
TPK1
LIN7C
POLE3
C9orf43
MARCHF8
ZFP14
KAT6B
PIAS3
ZBTB40
TEX46
KDM1A
ASAH1
SLC20A1
INKA2
DDX20
TCERG1
RIMBP3C
RIMBP3B
MBTPS2
ALDOA
HACD2
NCOA4
RSAD1
USP32
KDM3B
TMCC1
INTS4
PMF1-BGLAP
PMF1
BLM
NDUFB3
FAM126B
FAM76A
RAD9A
CCN2
C12orf65
LSM2
KRTAP20-4
GTF2H4
PPWD1
CENPK
AHCYL1
PUM1
BDP1
SLC16A1
MGST3
KLF4
SLC35A5
ATG3
DNMBP
SEC13
FHL1
VKORC1
FLCN
PI3
CIPC
H2AZ2
ZNF165
NXF1
PC
RAD51AP2
NR4A3
KRR1
TRIM44
COL16A1
TIMM23
ACAD9
ANKRD39
BHLHE40
TBC1D2
RPLP0
PDHA1
PPP1R37
MRM3
GLOD4
TCF19
CCHCR1
FBRS
SMYD5