ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652958 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◣ SRX13652958: HeLa

◢ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DUX4
DRAP1
C11orf68
ZNF143
POLR2J3
FRG2C
ZNF76
IL7R
GDA
PDXDC1
ARRDC4
NR4A1
HYAL2
KRT34
HSPE1-MOB4
HSPE1
HSPD1
ATXN7L2
HHIPL1
CCDC85C
MTRNR2L1
FAM53C
CDC25C
DAGLA
NNMT
SRI
HNRNPA2B1
CBX3
PSMC3
SLC39A13
HARBI1
ATG13
FGGY
TSR3
GNPTG
C11orf86
WDR74
STRBP
CSGALNACT1
PTGES
GPR137
BAD
ATR
BIRC7
CARD16
TBL1X
GBA
DYNC2I2
C5orf51
ASB2
NUDT3
COA1
TXNIP
RIN1
WASF2
BCAS1
SLC35E2B
SNX15
RAB22A
RCOR3
PLAU
ATG101
BIRC3
HMG20B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
KLRC2
CMSS1
OR10D3
KRT8
ERCC1
PSMA7
H4C14
RPN2
MROH8
PIK3R3
MAZ
TES
FHL2
IQCH
AAGAB
LIPK
NEK2
YY1AP1
DAP3
EIF2S3
OTULINL
FRG2
BRIX1
HAX1
HEXA
ATF7-NPFF
ATF7
FOS
GTF3C5
CETP
TEAD1
STX16
S100A2
SLC25A25
NAIF1
EIF3F
H4C12
NR6A1
EIF2D
CD55
KAT5
RHOT2
SPNS1
RFX1
TSC1
GFI1B
MAOA
H1-2
TXNRD1
CPA4
PLEKHA8
FKBP14
HNRNPF
ZNF687
WDR70
HAGH
FAHD1
POLG
PDE4D
AMDHD2
LAMP1
GLIS1
GFM1
UBE2B
CDKL3
OAS1
AGAP11
ADIRF
FAM156B
FAM156A
TSFM
NAGPA
PDK2
ALDH18A1
MFSD12
BRPF1
CDON
LOC102723996
ICOSLG
S100A16
USP2
IER3
FLOT1
RAPGEF1
SFSWAP
ARL8B
GPRC5A
RBM48
PEX1
PRKCZ
CDIPT
UBC
THEM4
DNAJC11
CITED4
KIF1C
INCA1
TEKT2
ADPRS
COA6
ISY1-RAB43
ISY1
GIT2
ANKRD13A
PRKCI
CUL2
ZC3H6
PPP1R13L
POLR1G
SCAND1
NOL8
CENPP
AURKAIP1
MRPL48
SETD1A
WDR43
ARFGAP2
STX1A
SLC41A3
P4HB
SPATA25
NEURL2
CTSA
TMEM185B
CLPTM1
POR
RAPGEF3
DNAJB12
TSN
NADK2
SURF6
KCTD5
ASB6
FBXO4
NYX
C1orf198
CAPN2
SEMA3B
ATL2
LRRC37A3
CYP1B1
NDUFS3
KBTBD4
FAM102A
ATAD2
CLTC
PPEF1
CDK1
CENPN
EIF3B
RPL37
NUP155
TIGD5
EEF1D
GATA2
ICE1
RASSF9
WASHC2C
GKN1
RPL26
ZNF341
SMYD3
POLR2J
UBE2I
MEAK7
PPIB
H4C15
PHF1
JUND
RHCG
SLC39A10
KLF1
GCDH
NDST2
MAIP1
LOC388282
KIFC3
AAAS
SQSTM1
SUMF1
STPG3
NELFB
SLC9A1
SSNA1
ANAPC2
DISP3
DOHH
RPS26
AMOTL1
RALGDS
TRMO
USP15
CRBN
USE1
INTS4
DDX17
MEF2D
MYL12B
ROBO1
TMEM222
SUPT7L
SLC4A1AP
GNAS
PTP4A1
TSEN54
CASKIN2
RIPOR2
TRIP13
BRD9
NDUFB1
CPSF2
PTDSS1
MTERF3
ZNF335
TSR2
TMC5
MRPS30
PIMREG
ATG16L2
DDX18
ATXN1
CLCN7
CDCA7L
DNAJC9
ASH1L
CIDEC
RELA
SLC8A1
WDTC1
DGAT2
CDIN1
LMNTD1
BAZ2A
ZFAND3
RPS20
TMEM95
KCTD11
MT1E
MT1M
CALM1
CDK5RAP2
INAVA
CEP295
CTCF
SNAPC5
QRICH1
LGALS9B
C8orf58
MYO9B
HAUS8
WARS2
NR2F2
SMIM12
SCAF11
H3C3
H2BC3
OSMR
TRUB2
COQ4
TMEM260
VIRMA
COG2
CFAP20
RNF103-CHMP3
RMND5A
EFCAB14
NSFL1C
CELF1
GYPC
SLC48A1
GIPC1
DIP2A
MMP13
AVPI1
ZBTB26
TPK1
SPATA46
C1orf226
RPLP0
ZZZ3
PMVK
LRRC20
C1orf174
SLC6A18
PHF19
HMCES
PRSS27
MGLL
OXR1
ARFGEF2
APOBEC3B
NAA60
SLC35B1
TMEM107
NMUR2
SYT7
POLA1
QSOX2
PCCB
ZBED5
HNRNPH1
MGST3
TTLL6
PPP2R5A
DPH7
INTS7
DTL
LRATD2
RHOBTB2
RETREG1
PPCDC
VPS33A
NPW
CMIP
CDK16
IBA57
PPP4R3A
GNL3L
VPS52
RPS18
PPWD1
CENPK
B3GALT4
S100A13
CHTOP
RBM8A
DAB2
PER1
LRPPRC
C6orf226
FUS
ITGB1
PPP6C
DOLPP1
ITGBL1
ZCCHC4
SYNC
MTCH2
DYNLL1
PRDM11
GRIPAP1
DDX46
ANKRD33B
DKK1
TSKU
NOLC1
MARCOL
PDHA1
AXL
SLC33A1
C21orf91
BRWD1
ZNF131
RPS14
LY6K
JUNB
PPP5D1
CALM3
KRT32
UBE3B
KCTD10
FZD1
NCBP3
SPRING1
RNFT2
ZNF219
TMEM253
NUF2
TBC1D13
VDAC2
ARID5A
ARL6IP1
MVK
CD59
ZER1
ZC3H10
RPL41
ATP6V0C
JRK
RALY
MMP24OS
MMP24-AS1-EDEM2
PDZK1
HES1
C19orf33
MTRR
FASTKD3
DHX8
ARHGAP17
NOCT
MARCHF8
TOR2A
CALM2
KRT80
TPRN
TMEM203
NDOR1
ETV6
CDKN1C
ATF3
FBXO46
PMF1-BGLAP
PMF1
MET
NEDD4
PEX3
ADAT2
H3C15
H3C14
H2AC19
H2AC18
AFF4
POLR1H
TMEM18
SRPRA
DNLZ
CHCHD5
ZFP64
INPPL1
XPO7
WDR25
WARS1
KLF4
NSUN4
DPY19L4
MAMDC4
KLHL15
FUT11
TINAGL1
DIDO1
TOR4A
PIP4K2B
PFDN4
TAMM41
VPS13C
C2CD4A
LIFR
EFCAB2
TARDBP
RNPS1
ASH2L
PAIP1
SEPTIN7
ITPRIP
PDE6D
COPS7B
PLIN3
SLC20A1
PLEC
CLCF1
LPIN1
HEMK1
C3orf18
USF1
ANK3
SDE2
DDX41
U2SURP
RXRA
YJU2
RFESD
PHKA2
USP36
NCOA5
RRNAD1
ISG20L2
WDR5
CCDC78
ANTKMT
NDRG1
LANCL2
BZW2
ANKMY2
ECT2
INKA2
DDX20
KIF27
RPL5
ZNF503
ACBD6
NTSR1
CHD2
PTGER4
DTWD2
AMOTL2
ARMC1
HIBADH
GUK1
MSTO1
SNAI2
UBQLN1
SUPV3L1
STK35
MRPL21
IGHMBP2
PIP5K1A
SMAD7
GATB
VPS72
TADA1
TPRA1
LRCH4
FBXO24
CREM
PLAAT2
ARMH3
TGIF1
TPM4
TMEM41A
EIF4A2
ERICH4
DMAC2
NUP214
DNAJC16
CASP9
HIF1AN
ZNF774
LOC100130520
CD300H
GIPR
COQ7
PCBP2
H2AX
DICER1
E2F8
DCLRE1B
AP4B1
OLFM1
NDUFS7
FAM72D
FAM72C
ACOT1
SSBP1
SKA2
PRR11
SMG7
PPP1R10
MRPS18B
CYP20A1
MUC13
WDR53
FBXO45
HACD2
BUD13
CYCS
FCHSD2
LRP6
CCDC97
UQCRC2
SLC25A45
FRMD8
ANKRD36C
ZFX
SCYL3
ZFPL1
TMEM262
CDCA5
THG1L
STAP2
MPND
TIAM2
ZC3H7A
PCIF1
CENPF
EPC2
SRSF3
XXYLT1
DDB2
UMPS
STARD7
EIF4G2
GTF2IRD2B
GTF2IRD2
HKDC1
CABLES2
ATMIN
TARS2
KDM5C
NUDT9
TOR1A
MTMR11
CCNL1
RAD23A
PDCD6
PSME3
RBM14-RBM4
RBM14
ALG10
ZDHHC6
VTI1A
POLE3
C9orf43
PUS10
PEX13
ALDOA
TLE1
RAD51AP1
C12orf4
C18orf63
SURF4
RCAN1
HASPIN
SMC3
OAZ3
NECTIN3
VPS11
SRSF11
HNRNPD
LRRC40
SLC25A53
TMEM9
NME1
KLF10
EXD1
CHP1
MAPK8
RCC1L
ARAF
NARF
PPOX
CCT5
ATPSCKMT
GALNT10
C2orf42
C22orf39
TMEM79
SMG5
LAMTOR1
BAZ1B
DCTN4
SF3B6
FAM228B
B4GALT7
PIM2
FURIN
THUMPD1
USP9X
AKIRIN1
AP3S1
PARVA
TMEM170A
PPP2R3A
SDC4
SLC6A9
PLCXD2
PAXIP1
NEDD4L
BBS1
PIH1D2
NKAPD1
EPRS1
PTCD2
MRPS27
SUMF2
MICAL2
TMIE
ALS2CL
HDAC6
ARID2
SIDT2
ELOB
RWDD1
RNASEK
C17orf49
COL16A1
SMAD3
MED23
UNC5B
SYNRG
SMARCD1
ZRANB3
R3HDM1
CCDC124
TRIM55
PEX11B
CSTF3
TIMM10
MINDY2
OSBP
ARL1
DLST
BNIP1
FOSL1
CAPRIN2
SRD5A1
NSUN2
ALDH3B1
ATXN7L3
SAMD9
ITGB3BP
EFCAB7
INA
IFT140
CRAMP1
ARHGEF1
ACOT9
MAPKAPK5
CDC23
TCF3
ZNF185
MTMR12
RNF214
PCSK7
IL4R
EIF4A1
PELP1
ARL4A
ZNF212
ZSCAN32
ZNF174
IFT52
TMCC1
NVL
LARP1
NPIPB8
SLC35A4
APBB3
SLCO4A1
STK17A
NBN
CACTIN
LRRC8A
KYAT1
PSMB7
NRAS
SLC25A10
PRDX1
TMEM221
SNRPG
PYCR2
YY1
RPL8
ZNF517
RCE1
MCOLN1
NOC4L
DDX51
DCXR
ATP8A1
LOXL4
AQP1
ABLIM1
SH3BP4
SECISBP2
ATF6
TACC1
PRKDC
MCM4
VEPH1
KLHL5
SELENOH
MFSD4B
TEX12
IL18
SMIM6
AKT2
MCM7
AP4M1
NDUFC2-KCTD14
NDUFC2
IL24
ZFAND2A
FAM71D
SMPD1
ELP5
CTDNEP1
NMNAT1
LZIC
ARNTL
PANX1
ZNF524
FIZ1
EIF3C
ZNF668
ZNF646
SIRT4
FLCN
USP12
TMEM247
SLC36A4
TAF4
TIMM50
TENT4A
TBL3
SKP2
LMBRD2
POU2F3
PYGO2
LOC101928120
UXT
CTSS
SAR1B
TMEM201
KLF13
SYPL1
SAC3D1
WFDC3
DNTTIP1
ETS1
KRTAP20-4
GABPB2
MSMO1
TCF19
CCHCR1
TFRC
C1QBP
PPP1R37
COPS7A
ANKRD2
MAGIX
LPCAT3
MEF2C
SFT2D3
FOSB
PRC1
KDM4D
CWC15
PHAX
DTNB
YTHDF1
ETFA
KNTC1
NTMT1
CXorf58
LIN7C
DPP3
SLC25A3
FAM25G
FAM25C
UBE2C
MSLN
SH3GL1
CHAF1A
GUCA2A
TM2D3
MXRA7
KDM3A
KRT78
STK4
SF3A3
STX18
TCTEX1D4
BTBD19
ZBTB38
C1orf115
B3GNT3
TOMM22
ATAD2B
GAPVD1
FRMD3
HSPA9
TK1
AFMID
RPL38
ZNF2
H4C3
H1-6
EPB41L1
XRN1
C1orf100
KMT2D
TCAF2
MBNL1
GCLM
TNRC18
TRMT61B
PFKP
PINX1
MAD2L2
INAFM2
LMNB1
C19orf53
SKIL
EPOP
MPV17L2
RBM4
TGFBR2
TM9SF3
ATXN1L
NR2C1
HMGCS1
TAS1R1
NOL9
PHRF1
NLE1
H3-3B
ARID3B
WDR13
MRRF
MRPL42
TMEM132A
AGTPBP1
FNTB
ADM
DIABLO
OPA1
CCL20
GABARAPL1
RBM24
RAB5B
GFOD1
SRCAP
LOC730183
SNAI1
UBE2Q1
ACAP2
FAM3C
RFWD3
DENND1A
USP54
EIF2S1
ATP6V1D
AQP5
CIZ1
KRT17
GATAD2A
SMN2
SMN1
LAMTOR5
LOC101928841
BCAS4
ABR
PDE12
UBALD2
C12orf43
SUSD1
H2AC16
H1-5
H3C11
CEP63
ANAPC13