ChIP-Atlas: Target genes

Potential target genes for CPSF6

Query protein: CPSF6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CPSF6 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CPSF6's Target genes

◣ CPSF6: Average

◢ SRX13652927: HeLa

◢ SRX13652928: HeLa

◢ SRX13652929: HeLa

◢ SRX13652930: HeLa

◢ SRX8945050: U2OS

◢ SRX8945056: U2OS

◢ CPSF6: STRING

FRG2C
DUX4
MTRNR2L1
ARL4D
FRG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
POLR2J3
SLC39A13
LOC102724770
DGCR6
ZNF839
RS1
PPEF1
PAIP1
DPH7
AMACR
MARCHF6
ZER1
POLG
FBXW2
CHD2
SECISBP2
CKS2
ASB6
CYB561D1
ATXN7L2
IRF2BP2
PRSS27
LRRC37A3
FBXO4
POLR3E
MTMR12
TRIP13
BRD9
AURKAIP1
IBA57
NIFK
LIFR
MUC1
TBC1D13
BRIX1
MPZL1
THEM4
MRPS16
DNAJC9
QSOX2
TRIM44
C5orf51
NCOA5
NEMF
STPG3
NELFB
FAM166A
ZNF341
NDST2
CELF1
PDCD6
MTCH2
POLE4
ART1
WFIKKN1
METTL26
MCRIP2
RICTOR
TMEM267
CCDC34
RPL27A
WDR70
NUP155
ARAF
KPNA1
PCCB
SSNA1
ANAPC2
CCDC200
OSMR
DAP
SLC36A4
PRKAA1
CPLANE1
NOTCH2
TMEM185B
SUB1
SCAND1
DGKZ
ROM1
EML3
B3GAT3
SELENOS
RAPGEF1
NTMT1
C9orf50
GOLGA6L4
PPP6R3
MAPK8IP3
PDE4DIP
COA6
NADK2
OTULIN
XRN1
RPL37
CARD6
CENPBD1
TMEM79
SMG5
JRK
TARS3
POFUT1
PLAGL2
PCIF1
ICE1
RWDD3
PDXDC1
MAPKAP1
LEKR1
NDUFS7
NDUFS3
KBTBD4
FAM180B
DNAJC21
NOXA1
FAM156B
FAM156A
CCT5
ATPSCKMT
SLC27A4
KIF27
PDZD2
SDE2
CNTRL
C5
FAM149B1
ECD
NARF
CYBC1
TEAD1
RHBDL1
SETX
GCLM
GTF2IRD2
ETS1
SYNRG
SRD5A1
NSUN2
DNAJB12
NBPF1
ZWILCH
SNAPC5
RPL4
EGLN1
DIP2B
USP21
UFC1
CNNM4
CLCC1
PHF20
PPP6C
PHKA2
MAP1LC3B
FBXO31
TMEM222
GTF2IRD2B
PRSS22
DIDO1
TTC9C
HNRNPUL2
TRIM65
TAF1D
POLR2D
MRPL38
C11orf54
MRPS5
GSTA4
CTR9
PPOX
RELA
KIF21A
LDLRAD3
ATP6V0C
AMDHD2
DRAP1
C11orf68
SKP2
PPIB
LMBRD2
IPP
TUT7
NUF2
CCDC88A
SEMA3C
DPY19L4
SMCO4
MTRR
FASTKD3
C6orf226
TAF4
DNAJC11
ANKRD36C
TMEM41A
RPS29
RAB11A
TM2D3
RNF7
CNBP
CXorf58
ADK
GUK1
GJC2
ARHGEF5
NYX
TP53BP2
CDC73
UXT
ELK1
HNRNPH1
PRELID3B
ATP5F1E
DAB2
PPP1R3F
FOXP3
STXBP3
RPAP3
NR1H3
ACP2
NCOA4
SRSF6
CCDC153
CBL
TARBP1
CCDC138
SEC61A1
RNF220
HMBS
CERS5
TRPC4AP
ANKH
ARHGEF11
SYP
CHMP7
EDC4
TTC33
S100A13
S100A1
CHTOP
GOLGA1
C1orf115
TPRN
TMEM203
NDOR1
KRT10
WDR25
WARS1
SCAI
DPP9
DTWD2
SNX19
NCBP3
TVP23B
ZNF131
RRNAD1
ISG20L2
CHAMP1
TRAP1
TOR2A
NGRN
RPL35
ARPC5L
NAT10
WDR38
TSKU
COQ7
LIN7C
FAM162A
CCDC58
OTUD7B
ASH1L
RSAD1
CHAD
MRPL3
LRRC58
ISCA1
CENPH
ANKRD36
DISP3
FPGS
UBAC1
STOM
GOLPH3
MYO10
PRCC
MKRN2OS
MKRN2
RPLP0
GCN1
PCBP2
EIF2D
ECI1
UQCC2
SFT2D3
UNK
PRDX4
H3-3B
ZBTB26
RABGAP1
BMS1
ABL1
LPCAT1
NBN
DGAT2
TWF1
PARVA
MTMR9
TTLL11
SLC35C2
CLPTM1L
TENT4A
SLC27A3
STX16
NIPBL
DYNC2I2
DEDD
CZIB
ARFGEF2
GXYLT1
RUVBL1
EEFSEC
TMEM199
SEBOX
POLDIP2
ADPRHL1
ZYG11B
SERP1
EIF2A
MADD
UBQLN1
SNAPIN
PRDM11
ZNF622
TOR1A
RHOT2
MDM4
GCFC2
BCAR3
ATR
HMGCS1
FAM102B
POR
RINT1
PUS7
USP2
CLYBL
TMEM250
FAM3C
SURF4
LOC100287896
LIPT2
VPS4A
SURF6
MXI1
PHF2
DYNC1LI2
RPS3
THAP12
GVQW3
DHX35
CDK5RAP2
RCE1
PSMD4
DDI2
SPIN1
ATG16L2
TMEM141
CPPED1
CCDC183
C6orf89
WDR74
TMEM68
TGS1
STX5
NDUFAF6
LUC7L
FAM234A
PPIA
TSC1
GFM1
GFI1B
GLIS2
SELENOT
SMIM41
DHX36
ATG101
PRRC2A
NLRX1
AIF1
VDAC2
SMARCB1
USP15
SH2D3C
RABL2A
GMPS
EIF2S3
SPOUT1
YTHDF1
PHF19
NCOA3
IQGAP1
RAB22A
PACSIN3
ARFGAP2
H4C12
H4C11
H2BC15
H2AC15
EBAG9
CHD1L
WDR13
PDCL3
PUF60
CIZ1
CSRNP2
TIMELESS
OXCT1
MYO9B
MIP
HAUS8
EI24
EED
AARS2
PROC
PRKAB2
ZFAND4
SLC35E2B
EXOC3
AVPI1
ZNF33B
TTC23
LRRC28
TXNDC11
RPGR
GET4
PANK3
LHX9
C1orf53
SPTAN1
RAC3
DCXR
PREX1
SLC44A1
SHC1
SENP1
PYGO2
PFKM
PBXIP1
LOC101928120
H4C14
H3C15
H3C14
H2AC19
H2AC18
MMP24OS
MMP24-AS1-EDEM2
EIF6
SLC35A3
HMCES
BICD2
THOC3
TAS1R1
REXO4
NOL9
ADAMTS13
YAP1
FUBP3
PXYLP1
OR1F1
FAM133B
STRBP
DESI2
ITGB5
SNAP47
JMJD4
AKIRIN1
ZNF143
MTF2
CREBZF
MANBAL
HNRNPF
TAF10
SDHAF2
RRP8
ILK
GHITM
CPSF7
YY1AP1
DAP3
TIPRL
SYS1
PSMD9
HPD
GTF2A2
CIAO3
GDF5
CEP250
PTGER4
MAN2C1
KLHL15
NUDT4B
NUDT4
SACM1L
CSE1L
TKFC
DDB1
CEP126
ANGPTL5
ANGEL1
SLC2A8
CROCC
USE1
MED10
MAPRE1
USP20
C9orf78
HOXC12
ABCD3
ZNF202
SEC24A
HPS6
ARMH3
SNRPD2
PRC1
FXN
DET1
TOR1B
ALDH1A3
TMEM109
TAF1B
PRPF19
GEMIN8
ZC3H7A
VPS52
SIRT1
RPS18
GPSM1
DNLZ
CARD9
B3GALT4
OSER1
COG2
TEKT2
ADPRS
SVBP
POLA1
NUP160
MRPL48
ERMAP
ARL6IP1
ZMPSTE24
PSMA7
IQCH
FCGR3A
DNM1
AAGAB
ZNF239
CIPC
SYAP1
CTPS2
C7orf25
TAF15
JRKL
CCDC82
FAM76B
CEP57
CEP295
CDKN2AIPNL
CASK
GOLGA5
RXYLT1
LIMS1
KIFBP
ARHGEF35
SDHA
RAB14
GSN
CCDC127
CREM
ZNF487
FBXO28
ARHGAP29
EFCAB2
IPO13
ERCC6
PSMD3
CRBN
PWP2
LOC102724159
INKA2
DDX20
CDC16
ZNF774
FBXO22
ERCC6L2
TSPAN10
TMEM9B
SPPL2A
NPLOC4
GAPVD1
BCAP29
UBE2V2
SENP5
PGPEP1L
NUP133
SAMD8
MRRF
H3C13
H2BC18
DUSP13
NAA60
BASP1
TPP1
PSRC1
DTX2
SCYL1
FAM228B
CLTC
ADO
FUT11
CHCHD1
SEC11A
PARK7
ITGB1BP1
CPSF3
BRMS1
TMEM87B
UNC50
CREG1
COA5
DOLPP1
ZBTB34
TRIM33
ZNF124
TMEM14B
GPSM2
SP1
PPIL1
HENMT1
RNF19A
NAXE
LINS1
GPATCH4
DSTYK
ASB7
ABCA3
PHF8
TMED9
NOS1AP
MSTO1
EPHX1
B4GALT7
SREK1
POLD2
ANKRD40
SRSF4
KCTD5
FBF1
ZFX
SEC13
CD79A
ARHGEF1
ZNF697
GINS4
RALGDS
PANX1
COA7
TSNAX
TEX46
SPECC1L
NIPA2
METRN
KDM1A
HAGHL
CCDC78
ANTKMT
MICU2
DYNLRB1
TMEM167B
CLASRP
ZNF652
ST3GAL3
SLC20A1
RBM6
MON1A
LEMD2
H2BC21
H2AC21
H2AC20
ARL8B
ZNFX1
ZNF408
GRSF1
ARHGAP1
TP53I3
SF3B6
SF3A1
HSPA6
EXOSC6
CCDC157
FCHSD2
RNPS1
KLHL12
PTGES2
DBNDD2
SARAF
PSMF1
MARK1
FAM227B
DTWD1
PTPN1
TRIM7
MCU
VPS37C
SMARCD1
ENDOD1
DCUN1D2
CHMP4B
CFAP410
VPS26A
UNC45B
NLE1
GK5
ZBTB6
RC3H2
H4C15
FH
SMC1A
RIBC1
POMZP3
DLGAP4
TMCO2
NDUFAB1
ACER3
TSN
PLXNA1
C9orf16
ZNF195
SPDYE14
SPDYE10P
PRKAG1
NUDT15
NDUFS6
NBPF15
MRPL36
FRA10AC1
ZMIZ2
UBQLN2
TSPYL2
RTF2
CBWD5
CBWD3
ROPN1L
HLCS
FDX1
CATSPERE
AGL
ADSS2
PDHX
PARP1
ASNS
APIP
ZNF181
FAM118A
CLPB
TMEM41B
SNRNP200
COX5A
TEX261
TBC1D10C
RAD9A
PPP1CA
TMEM170A
SRPRA
SPATA33
RELT
MPP5
LCNL1
CLIC3
ATF3
SUMF2
STAG1
PTAR1
PPARD
RPN2
MROH8
IER3
FLOT1
NCAPH
ITPRIPL1
SLC25A10
NOMO3
MRPL12
ABCC6
OLFML2A
NR6A1
CDK5RAP1
NPIPA3
NPIPA2
DNPH1
UHMK1
AMOTL2
AGK
MRPL40
HIRA
ZNF438
UAP1
TAB3
AHCYL1
RPS5
ASH2L
TRAF6
SRP9
RAG1
ADI1
TUBA1C
PSMG1
MOSPD2
FANCB
EEF2K
SRRM2
CAPN2
UPF1
CEP63
ANAPC13
AMOTL1
POGK
MYBPC3
EEPD1
TRAF3IP3
PIP4K2B
ANKRD36B
SRGAP1
PURA
NME2
ACOT7
URGCP
UBE2D4
SLC35F3
GMEB2
APPL2
AHRR
UGCG
DR1
AFF4
SDC4
HACD2
DDB2
TNS2
SNAPC4
BRD3OS
TMEM126B
DLG2
CARMIL1
ATMIN
SLC30A5
CBWD6
B4GAT1
PRSS33
ERI1
ELOB
ZBTB45
VDR
RNF14
KATNBL1
ATF7-NPFF
ATF7
TFAM
JAGN1
GALNT18
FAM207A
COMMD2
LANCL2
CRLF3
ATAD5
MBTPS2
TOMM34
TECPR2
STK4
SSU72
PMPCA
ENTR1
CINP
ANTXRL
SNF8
CAPRIN2
C16orf87
AHCY
ZDHHC17
RAB8A
OVCA2
ZNF326
PSEN2
CMBL
FKBP9
ZNF488
DDX46
TARBP2
RAP1A
OPN3
MAP3K12
GNPTAB
CHML
GTF2H2C_2
GTF2H2C
CUL2
ZNF485
MYLK
XPNPEP1
MTCH1
PRSS23
H2AX
DPAGT1
ANKRD39
POLR3GL
LIX1L
ANKRD34A
SRCAP
LOC730183
ZFR
DPH6
CA5B
ANKRD33B
SAYSD1
ACAD9
INPP5E
EIF1
CCDC91
ASPSCR1
NFYC
XYLB
TRAM2
SAR1A
BOLA3
TTC4
RASA2
PRDM10
NIT2
PON2
MRTO4
EMC1
CDON
AAAS
SART1
NAA35
TM7SF3
TERF2
RNASEH1
PIK3CB
NMNAT1
MED21
LZIC
FTH1
EDF1
RGPD8
RGPD5
MTHFS
ZNF76
MED13L
CTNNAL1
CDIP1
ACACA
SYF2
OLFM1
GTF3C5
BAG2
RNASEH2C
KAT5
TMEM106B
NXF1
MTIF2
HS1BP3
EPRS1
ASCC1
ANAPC16
ZNF41
TMEM132A
PIGV
IMMP2L
ADCK1
RRP15
PGBD1
TNPO1
PIGX
HPS5
GTF2H1
CEP19
RETREG1
GATAD2A
FITM2
CCDC14
VARS2
TMEM47