ChIP-Atlas: Target genes

Potential target genes for CPSF6

Query protein: CPSF6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652930 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF6's Target genes

◢ CPSF6: Average

◢ SRX13652927: HeLa

◢ SRX13652928: HeLa

◢ SRX13652929: HeLa

◣ SRX13652930: HeLa

◢ SRX8945050: U2OS

◢ SRX8945056: U2OS

◢ CPSF6: STRING

DUX4
FRG2C
MTRNR2L1
ARL4D
FRG2
LOC102724770
DGCR6
POLG
NEMF
POLR2J3
WDR74
STX5
RS1
PPEF1
ZNF839
FCGR3A
NDUFS7
DPH7
POLR3E
BRMS1
B4GAT1
NOTCH2NLC
NOTCH2
PRMT5
SLC39A13
MPZL1
ZNF285
TRIP13
BRD9
SACM1L
CCDC200
QSOX2
STPG3
NELFB
FAM166A
HSPA6
LRRC37A3
GSTA4
KNL1
NOTCH2NLB
NOTCH2NLA
LTA4H
SHF
CYB561D1
ATXN7L2
JRK
WFIKKN1
METTL26
MCRIP2
NPR1
ILF2
NADK2
RRN3
KIFBP
METRN
HAGHL
CCDC78
ANTKMT
BRIX1
POLR2D
TIA1
PCYOX1
NDST2
ICE1
HMGN4
OR6S1
RPL37
CARD6
PAIP1
PRSS27
RPS29
TRIM41
ZNF184
COA1
SELENOT
FBXO4
RAPGEF1
NOXA1
SRD5A1
NSUN2
NUF2
ISY1-RAB43
ISY1
CENPBD1
C8orf37
NME1
TRIM44
FCGR3B
MARCHF6
ZBED9
CCT5
ATPSCKMT
PRRC2A
AIF1
AURKAIP1
PCCB
TWF1
BORCS6
SUB1
HES7
ALOXE3
CLPTM1L
SENP5
GTF2H2C_2
GTF2H2C
UXT
ELK1
CREG1
TRIM7
CNBP
SURF6
ALG10B
FANCD2
MAP1LC3B
FBXO31
MTF2
SNRPD1
PRCC
TSPYL2
SEC16A
C9orf163
CDK5RAP1
XYLB
DAZAP2
H2BC17
H2AC17
OR2B2
GUK1
GJC2
TBCCD1
DNAJB11
DAP
DNAJC11
PSMD9
HPD
PLXNA1
NBPF15
PRDM10
POFUT1
PLAGL2
GTF2IRD2
GTF2IRD2B
ZER1
FAM156B
FAM156A
ECI1
MDM4
PAIP2
FBXW2
NUDT15
TUBGCP5
ZC3H10
RPL41
ESYT1
LUC7L2
WARS2
FMC1-LUC7L2
FMC1
FUS
SERP1
EIF2A
TMEM185B
MRPS30
PPA1
AHCY
POLE4
PPP6R3
ATP5MC2
EIF2S3
GPSM1
DNLZ
CARD9
CASK
INPP5E
RPS14
PPP6C
BMS1
RAB22A
PUF60
OR1F1
NDUFS3
KBTBD4
FAM180B
RAB11A
RPL35
ARPC5L
WDR38
H4C14
H3C15
H3C14
H2AC19
H2AC18
MAPRE1
MRRF
H4C15
MYH7B
GSS
DNAJB12
RUVBL1
EEFSEC
RRP15
MARCHF5
CPEB3
RAP1B
SSNA1
ANAPC2
TP53BP2
RAB14
GSN
ZNF326
ATN1
PTPN6
C12orf57
TMEM267
TPRN
TMEM203
NDOR1
CDKN2AIPNL
RELT
WDR33
LDLRAD3
PRDM11
EXOSC10
IMP4
CCDC115
CELF1
PHKA2
REV1
YRDC
C1orf122
TADA3
ARPC4-TTLL3
ARPC4
C5orf51
IQCH
AAGAB
RNF227
OTULIN
CNNM4
RELA
HMBS
UBQLN1
SMIM41
ATG101
H2AX
DPAGT1
BCAR3
DLST
TMEM126A
JUP
ZNF84
HTATSF1
BRS3
ZNF622
CHD1L
ANGEL1
DPH6
DCT
NCOA5
HNRNPH1
CHMP7
SFT2D3
TAF10
RRP8
ILK
TPP1
IMMP2L
NUP214
RAE1
MTRNR2L3
STX18
ATP6V0C
AMDHD2
MTRR
FASTKD3
CIAO3
SLC66A3
EIF1AD
CST6
BANF1
RBM28
RHBDL1
TARBP1
ATR
WDR24
STUB1
JMJD8
NFYB
PXYLP1
ZNF124
PGAP2
RBM15B
MANF
TSACC
CCT3
MRPS16
DNAJC9
WDR70
NUP155
MRPS5
SLC44A1
SPSB3
NUBP2
MRPS34
EME2
NME3
ZNF107
NIFK
SCAND1
ZNF33B
ZNF341
PRKAB2
RPGR
DBNDD2
SLC25A10
MRPL12
SCRIB
TIMM23
CNTRL
C5
NUP160
EEPD1
CRY2
TGFBRAP1
C2orf49
TOR2A
PSMD3
EXOSC6
MTMR12
TBC1D13
SLC36A4
TVP23B
TMEM68
TGS1
SNAP47
JMJD4
ZNF143
UTP18
MBTD1
CSTF1
AURKA
TAS1R1
NOL9
MTARC2
NDUFC2-KCTD14
NDUFC2
TTC9C
HNRNPUL2
PPP1R3F
FOXP3
RNF220
GOLGA1
TMEM170A
KATNBL1
RICTOR
USP21
UFC1
CXorf58
GCFC2
RABL2A
ZBED8
HILPDA
MTCH2
RSAD1
CHAD
PACSIN3
ARFGAP2
SHC1
PYGO2
PBXIP1
LOC101928120
SNAPC4
MPHOSPH6
MBTPS1
PRMT6
POMZP3
NOD1
EMILIN1
OST4
ETNK1
RMND5B
ELAC1
ASB6
ROM1
EML3
B3GAT3
TAF4
BRPF1
FAM168B
TUBGCP3
CDK20
MMUT
CENPQ
KPNA1
FUBP3
SDHAF2
CPSF7
NIPA2
TRIM3
TIMM10B
TATDN3
NSL1
RPS20
RABL6
MRPL17
WDR36
SELENOS
DPY19L4
NCOA4
GOLPH3
PDCD6IP
PDZD2
TMEM167B
C9orf16
NOC3L
HCCS
RPP25
CXCL2
UBC
YAP1
DOLPP1
NME2
DCPS
NOL3
KIAA0895L
EXOC3L1
E2F4
ATG16L1
PDE4DIP
PRDX4
C6orf89
PPIL1
TARBP2
MAP3K12
NPFF
ZNF593
CNKSR1
C1orf232
ADK
TRAP1
UQCC2
TMEM199
SEBOX
POLDIP2
YTHDF1
KLHL35
URB2
TAF5L
ROMO1
PPIF
B2M
SLC35A3
DSTYK
PHF8
BUD13
WDR5
ZBTB33
TMEM9B
SARAF
ALKBH3
SLC38A5
FTSJ1
C18orf25
NBPF1
TENT4A
ALDH1A3
HOXD8
TM2D3
MKRN2OS
MKRN2
ZNF697
FKBP9
MEF2A
USP47
PLXDC1
PRKAR1B
MICALL2
ABCD3
HENMT1
SETD3
CCNK
RNF114
LTN1
MAPK8IP3
MYO9B
HAUS8
POLR3GL
LIX1L
ANKRD34A
STARD7
PMF1-BGLAP
PMF1
LRIF1
TTC13
ARV1
ZBTB45
TRIM28
DCP1A
VPS45
EXD1
CHP1
AMZ2
TBK1
ANKS6
RPLP1
CTTNBP2
EXOC3
EIF4EBP2
MRPL55
UBXN2A
SMC1A
RIBC1
CEP295
PARP1
SPATA33
TRAPPC3
MAP7D1
PYCR2
MRPL44
ANKRD36C
SPDYE14
SPDYE10P
CASTOR2
TNKS
UBE2G2
CEBPA
OSMR
TAF1B
NAA60
LIN9
COMMD1
CCT4
ZNF286A
SNX11
CBX1
MAP3K2
PDE7A
TMEM126B
DLG2
SKP2
LMBRD2
GAPVD1
F8
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
KNTC1
PPOX
CCDC83
CHERP
IPPK
AHRR
NDUFAF3
IMPDH2
DALRD3
TOPBP1
TF
THEM6
TRIM65
MRPL38
SRSF6
RCE1
DDX46
PNMA1
TRIP6
SRRT
MSTO1
WDR4
SECISBP2
CKS2
BICD2
FAM228B
TP53I3
SF3B6
MRPL21
IGHMBP2
CAND1
LIFR
MPP5
TMCC1
SMARCC1
MTMR9
MRAS
ERCC3
SPAG9
MYO10
TEX46
KDM1A
GOLM1
FUNDC2
ZNF79
ZNF574
CKAP5
TSTD2
NCBP1
PRR25
GNG13
NOS1AP
SUV39H1
TAF9
RAD17
AK6
DCLRE1B
AP4B1
RBM14-RBM4
RBM14
PRPF8
ATP6V0A2
PDHA1
CRYBG3
PDE2A
AMACR
CHD2
IRF2BP2
IBA57
MUC1
THEM4
PDCD6
ART1
CCDC34
RPL27A
ARAF
PRKAA1
CPLANE1
DGKZ
NTMT1
C9orf50
GOLGA6L4
COA6
XRN1
TMEM79
SMG5
TARS3
PCIF1
RWDD3
PDXDC1
MAPKAP1
LEKR1
DNAJC21
SLC27A4
KIF27
SDE2
FAM149B1
ECD
NARF
CYBC1
TEAD1
SETX
GCLM
ETS1
SYNRG
ZWILCH
SNAPC5
RPL4
EGLN1
DIP2B
CLCC1
PHF20
TMEM222
PRSS22
DIDO1
TAF1D
C11orf54
CTR9
KIF21A
DRAP1
C11orf68
PPIB
IPP
TUT7
CCDC88A
SEMA3C
SMCO4
C6orf226
TMEM41A
RNF7
ARHGEF5
NYX
CDC73
PRELID3B
ATP5F1E
DAB2
STXBP3
RPAP3
NR1H3
ACP2
CCDC153
CBL
CCDC138
SEC61A1
CERS5
TRPC4AP
ANKH
ARHGEF11
SYP
EDC4
TTC33
S100A13
S100A1
CHTOP
C1orf115
KRT10
WDR25
WARS1
SCAI
DPP9
DTWD2
SNX19
NCBP3
ZNF131
RRNAD1
ISG20L2
CHAMP1
NGRN
NAT10
TSKU
COQ7
LIN7C
FAM162A
CCDC58
OTUD7B
ASH1L
MRPL3
LRRC58
ISCA1
CENPH
ANKRD36
DISP3
FPGS
UBAC1
STOM
RPLP0
GCN1
PCBP2
EIF2D
UNK
H3-3B
ZBTB26
RABGAP1
ABL1
LPCAT1
NBN
DGAT2
PARVA
TTLL11
SLC35C2
SLC27A3
STX16
NIPBL
DYNC2I2
DEDD
CZIB
ARFGEF2
GXYLT1
ADPRHL1
ZYG11B
MADD
SNAPIN
TOR1A
RHOT2
HMGCS1
FAM102B
POR
RINT1
PUS7
USP2
CLYBL
TMEM250
FAM3C
SURF4
LOC100287896
LIPT2
VPS4A
MXI1
PHF2
DYNC1LI2
RPS3
THAP12
GVQW3
DHX35
CDK5RAP2
PSMD4
DDI2
SPIN1
ATG16L2
TMEM141
CPPED1
CCDC183
NDUFAF6
LUC7L
FAM234A
PPIA
TSC1
GFM1
GFI1B
GLIS2
DHX36
NLRX1
VDAC2
SMARCB1
USP15
SH2D3C
GMPS
SPOUT1
PHF19
NCOA3
IQGAP1
H4C12
H4C11
H2BC15
H2AC15
EBAG9
WDR13
PDCL3
CIZ1
CSRNP2
TIMELESS
OXCT1
MIP
EI24
EED
AARS2
PROC
ZFAND4
SLC35E2B
AVPI1
TTC23
LRRC28
TXNDC11
GET4
PANK3
LHX9
C1orf53
SPTAN1
RAC3
DCXR
PREX1
SENP1
PFKM
MMP24OS
MMP24-AS1-EDEM2
EIF6
HMCES
THOC3
REXO4
ADAMTS13
FAM133B
STRBP
DESI2
ITGB5
AKIRIN1
CREBZF
MANBAL
HNRNPF
GHITM
YY1AP1
DAP3
TIPRL
SYS1
GTF2A2
GDF5
CEP250
PTGER4
MAN2C1
KLHL15
NUDT4B
NUDT4
CSE1L
TKFC
DDB1
CEP126
ANGPTL5
SLC2A8
CROCC
USE1
MED10
USP20
C9orf78
HOXC12
ZNF202
SEC24A
HPS6
ARMH3
SNRPD2
PRC1
FXN
DET1
TOR1B
TMEM109
PRPF19
GEMIN8
ZC3H7A
VPS52
SIRT1
RPS18
B3GALT4
OSER1
COG2
TEKT2
ADPRS
SVBP
POLA1
MRPL48
ERMAP
ARL6IP1
ZMPSTE24
PSMA7
DNM1
ZNF239
CIPC
SYAP1
CTPS2
C7orf25
TAF15
JRKL
CCDC82
FAM76B
CEP57
GOLGA5
RXYLT1
LIMS1
ARHGEF35
SDHA
CCDC127
CREM
ZNF487
FBXO28
ARHGAP29
EFCAB2
IPO13
ERCC6
CRBN
PWP2
LOC102724159
INKA2
DDX20
CDC16
ZNF774
FBXO22
ERCC6L2
TSPAN10
SPPL2A
NPLOC4
BCAP29
UBE2V2
PGPEP1L
NUP133
SAMD8
H3C13
H2BC18
DUSP13
BASP1
PSRC1
DTX2
SCYL1
CLTC
ADO
FUT11
CHCHD1
SEC11A
PARK7
ITGB1BP1
CPSF3
TMEM87B
UNC50
COA5
ZBTB34
TRIM33
TMEM14B
GPSM2
SP1
RNF19A
NAXE
LINS1
GPATCH4
ASB7
ABCA3
TMED9
EPHX1
B4GALT7
SREK1
POLD2
ANKRD40
SRSF4
KCTD5
FBF1
ZFX
SEC13
CD79A
ARHGEF1
GINS4
RALGDS
PANX1
COA7
TSNAX
SPECC1L
MICU2