ChIP-Atlas: Target genes

Potential target genes for CPSF6

Query protein: CPSF6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652929 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF6's Target genes

◢ CPSF6: Average

◢ SRX13652927: HeLa

◢ SRX13652928: HeLa

◣ SRX13652929: HeLa

◢ SRX13652930: HeLa

◢ SRX8945050: U2OS

◢ SRX8945056: U2OS

◢ CPSF6: STRING

DUX4
FRG2C
MTRNR2L1
ARL4D
FRG2
LOC102724770
DGCR6
POLR2J3
NPR1
ILF2
ZNF839
WFIKKN1
METTL26
MCRIP2
POLG
NDUFS7
RAB11A
CCDC200
DRAP1
C11orf68
IBA57
PCCB
RS1
PPEF1
FCGR3A
QSOX2
TARS3
HSPA6
POLR3E
DIDO1
WDR74
STX5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RPS29
SLC39A13
PAIP1
DCT
HMGN4
TRIP13
BRD9
AURKAIP1
LIFR
OSMR
H2BC17
H2AC17
OR2B2
RPL12
LRSAM1
NEMF
TRIM41
POFUT1
PLAGL2
MTRR
FASTKD3
GSTA4
C8orf37
SLC36A4
TAF4
SHF
KNTC1
CYB561D1
ATXN7L2
TMEM185B
FBXW2
FBXO4
DPP9
MTCH2
BRIX1
NBPF1
NFATC3
ZNF184
FAM156B
FAM156A
SACM1L
STPG3
NELFB
FAM166A
ZER1
PCIF1
MARCHF6
DAP
BRMS1
B4GAT1
ATP6V0C
AMDHD2
NOXA1
SREK1
MYO10
RPL5
WDR70
NUP155
DDX46
KNL1
POLE4
RPN1
BORCS6
H4C14
H3C15
H3C14
H2AC19
H2AC18
TRIM7
SDHAF1
NDUFAF6
PMPCA
ENTR1
TMEM109
PRPF19
SLC35E2B
LTA4H
WDR25
WARS1
NCBP3
COMMD2
GTF3C5
TMEM186
PMM2
MIS12
DERL2
TMEM79
SMG5
CLPTM1L
GCFC2
H4C12
H4C11
H2BC15
H2AC15
TRIM33
AHRR
PPM1G
LUC7L2
FMC1-LUC7L2
FMC1
RXFP4
KHDC4
PDZD2
MPZL1
RAPGEF1
DIP2B
MTMR12
BCAR3
NDUFAB1
TMEM262
ZFPL1
CDCA5
NDUFS3
KBTBD4
FAM180B
TRAP1
NUDT4B
NUDT4
SMARCB1
SLC44A1
TUBGCP5
TOR1A
NXF1
EXOSC10
NCOA7
PAAF1
COA4
IRF2BP2
RUVBL1
EEFSEC
PUF60
ZFP36
PLEKHG2
PPP6R3
RPL37
CARD6
TSPAN10
NPLOC4
PIH1D2
NKAPD1
SECISBP2
CKS2
ICE1
SURF2
SURF1
RPL7A
MED22
UBQLN1
NDUFS6
MRPL36
CRY2
NR1H3
ACP2
TSC1
GFI1B
GET4
SPDYE14
SPDYE10P
H4C15
HYOU1
SUB1
ANKRD36C
POR
SYS1
CSE1L
MTF2
MDM4
RAB14
GSN
RNF169
RABL2A
WARS2
DBNDD2
RGS14
LMAN2
ISY1-RAB43
ISY1
PHLDA3
EDC4
DGAT2
ARFGEF2
NUP160
ARL14EP
SEC16A
C9orf163
ASB6
ARAF
LOC100287896
LIPT2
OR1F1
ALG10B
SRSF7
ZBED9
UNK
H3-3B
TMEM199
SEBOX
POLDIP2
TMEM167B
GMEB2
LAMP1
MRPS2
C9orf116
UBE3B
KCTD10
NARF
CYBC1
TAF1D
C11orf54
SLC20A1
TMEM132A
DUSP2
ASTL
HNRNPL
FANCA
WDR43
SCAND1
SRD5A1
NSUN2
RPAP3
PTAR1
TIMM23
OTULIN
SPIN1
ZNF408
ARHGAP1
RBM3
SCARB2
FAM47E
PLXDC1
SFT2D3
RXYLT1
SMC1A
RIBC1
ADPGK
LRRC37A3
SDHAF2
CPSF7
ERICH4
DMAC2
CXorf58
U2AF1L5
U2AF1
HMBS
SNX19
AKIRIN1
H2AX
DPAGT1
NR4A1
TIA1
PCYOX1
CCDC112
TSNARE1
RAE1
MTRNR2L3
TTYH2
RPL38
NIFK
TTLL11
VPS4A
DNPH1
ZBTB45
SLC27A5
DPH7
UBE2V2
ZNF341
TMEM267
MAPK8IP3
ERCC6L2
AXIN1
MYBL2
PRMT5
GPLD1
ALDH5A1
ZMAT1
CPLANE1
GOLGA6L4
RWDD3
TAF10
RRP8
ILK
TPP1
NDUFB7
PMVK
WDR36
MED10
MRPL48
PRAG1
TATDN3
NSL1
HEATR1
RNF220
UQCC2
ABCD3
DIABLO
MRPL21
IGHMBP2
AHCTF1
MRPL20
CCNL2
USP21
UFC1
PPOX
YTHDF1
TMEM18
KLF4
PRKAA1
NTMT1
C9orf50
CCT5
ATPSCKMT
RINT1
PUS7
MYBPC3
VARS2
GTF2H4
SLC25A32
DCAF13
NMD3
ORC5
TIMM10
SMTNL1
XRN1
TP53BP2
RCE1
GFM1
PSMA7
VPS26A
EIF1
YRDC
C1orf122
BROX
AIDA
TSPAN13
MRPS22
TWF1
SIRT1
CDKN2AIPNL
ABCA3
ZC3H10
RPL41
ESYT1
XRRA1
SPCS2
AMACR
KIF27
MRPS5
NCKIPSD
TEAD1
LUC7L
FAM234A
PPIA
WDR13
NUP188
DOLK
MRPS25
ARHGEF11
RSAD1
CHAD
SLC35C2
TEKT2
ADPRS
SDK1
FAM72D
FAM72C
COX20
ME3
NRF1
RHBDL1
RPL35
ARPC5L
WDR38
CEP295
ARL8B
WDR24
STUB1
JMJD8
PRMT3
TMEM126A
SAMD4B
GMFG
TTI1
RPRD1B
NOCT
TBC1D13
RPL27A
CNNM4
C7orf25
KDM4D
CWC15
RPP25
NAT10
USP2
SELENOT
RGPD8
RGPD5
TPRA1
HUWE1
FH
FAM72A
RITA1
DDX54
TMEM102
SPEM3
FGF11
CHRNB1
VPS35
JRK
SERP1
EIF2A
RPS3
MRRF
PSRC1
CD79A
ARHGEF1
NIPA2
UNC45B
NLE1
UPF1
CEP63
ANAPC13
ERMARD
METTL25
CCDC59
TRIM44
NCOA5
HNRNPH1
GHITM
RNF187
IPPK
SSNA1
ANAPC2
GUK1
GJC2
TENT4A
MAPK8
SF3A3
SLC12A7
CHERP
TSGA10
EIF1AD
CST6
BANF1
TAF13
TBCA
RNF149
PDXDC1
TTC9C
HNRNPUL2
SEMA3C
PPP1R3F
FOXP3
YAP1
SNAP47
JMJD4
KIFBP
TRAF6
RAG1
RNF168
NAE1
TRUB2
COQ4
THG1L
SPRYD4
SSBP1
COA7
GK5
URB2
TAF5L
TSFM
MORC3
CPSF6
POLR3B
AAR2
DHCR24
TCTA
RHOA
CNBP
TAS1R1
NOL9
POLA1
RNASEH1
ATP5MC2
BRWD1
NANS
EXOC2
ACSF3
ZC3H8
HCCS
UCK2
TTLL5
ERG28
UQCRFS1
ATAD2
WBP11
C12orf60
SARNP
ORMDL2
PRSS27
NDST2
SKP2
LMBRD2
S100A13
S100A1
CHTOP
TSKU
CIZ1
DNM1
ATF3
ZFR
MRPL44
MAP3K2
PDPR
SCARF2
SLC27A4
DHX35
ITGB1BP1
CPSF3
SCRIB
MAOA
PMF1-BGLAP
PMF1
ZNF670
NUDT18
VPS26B
NCAPD3
CCDC34
KPNA1
LDLRAD3
LRRC58
AHCY
SERF1B
SERF1A
PGP
ZNF318
CASKIN1
BRICD5
LSM14A
STIMATE-MUSTN1
STIMATE
TJP3
PIP5K1C
SMCO4
FAM133B
PSMD9
HPD
PSMF1
AGL
ZDHHC17
SART1
AMFR
NDUFAF3
IMPDH2
DALRD3
HEMK1
C3orf18
MTR
RTTN
MED16
ISCA1
TOR1B
NAXE
GPATCH4
SF3A1
CCDC157
WDR41
PAM16
C9orf40
GLO1
SUCLG2
ECM1
POLR2D
TOR2A
RNPS1
STAG1
XYLB
STMN3
RTEL1
BUD13
PSD3
UTP18
MBTD1
ZNF746
BICD1
CLCC1
SRSF6
OXCT1
PARK7
TECPR2
CINP
PIGX
CEP19
CCDC14
LPGAT1
TBCCD1
DNAJB11
CTNNBL1
GOLGA3
SUGCT
MPLKIP
RPL13
COG1
PTPA
CRAT
SETX
PHF20
KIF21A
BMS1
SRSF4
OGFOD3
HEXD
NOL8
CENPP
HSPA5
MANBAL
GPSM2
XPNPEP1
MARK2
TMEM117
CABLES2
AFF1
UQCC3
LBHD1
NRIP1
UBXN1
UXT
ELK1
DYNC2I2
TTC23
LRRC28
HNRNPF
ZNF239
MSANTD2
DNAJC25-GNG10
DNAJC25
URI1
ZNF319
USB1
SLC15A4
TUT7
ANKH
USP15
SAMD8
DUSP13
DOLPP1
HENMT1
PANX1
NOMO3
ABCC6
SRXN1
PYCR3
GFUS
ARL2
NTAN1
FUS
DCAF1
FANCL
DLAT
GTF2IRD2
DNAJB12
GTF2IRD2B
CTR9
IPP
TTC33
METRN
HAGHL
CCDC78
ANTKMT
GPR107
NUP214
MRPS30
DUSP12
H3-3A
ABTB1
PFDN2
NIT1
DECR1
THEM4
C5orf51
CHAMP1
LIN7C
AARS2
TEX261
LCNL1
CLIC3
ODC1
RPUSD4
FAM118B
HDAC6
VPS26C
STRIP2
FBXW4
DNAJC11
FAM3C
THOC3
FDX1
FAM118A
MTIF2
TP53RK
SLC13A3
UNKL
MRPL17
ATP6V0A2
THUMPD1
KHDRBS1
LEO1
EEF1AKMT2
ABRAXAS2
AMBRA1
TARBP1
EI24
STRBP
P2RX4
USPL1
HMGB1
MRPS31
COA1
TXNDC17
KIAA0753
RBM4
NYX
RAC3
DCXR
DTX2
FUT11
CHCHD1
ZNF124
TMEM14B
DSTYK
CFAP410
SRPRA
ADAR
RRN3
FAM168B
UNC45A
HDDC3
USP7
RHNO1
FOXM1
GPX1
ZNF79
MYNN
ACTRT3
FCGR3B
RICTOR
MAPKAP1
RNF7
ADPRHL1
SLC35A3
CIAO3
ZMIZ2
PON2
OLFM1
DCPS
XPC
LSM3
RANBP2
DNAJA3
CORO7-PAM16
CORO7
YBEY
MCM3AP
NT5C
USP31
NSMF
MAGOH
MRPS15
INTS2
TM2D3
SEC61A1
MXI1
TMEM68
TGS1
DHX36
TAF15
SPPL2A
MBTPS2
C7orf26
RPS19
DZIP1L
USP24
MAP4K4
SLC2A13
USP36
ZMYND19
SLC25A13
KANSL2
CCNH
ATP6V1FNB
ATP6V1F
PDCD6
CNTRL
C5
PPP6C
ASH1L
SLC27A3
EIF2S3
FBXO22
TMED9
B4GALT7
NAGPA
EFCAB14
CACTIN
DHRS12
EGLN2
CLPP
ACTB
GINS1
WDR5B
PDE4DIP
CCDC138
FAM162A
CCDC58
ANKRD36
CHD1L
REXO4
ADAMTS13
LINS1
ASB7
NBPF15
AMOTL2
ZNF485
EDF1
EHMT1
YLPM1
FLVCR1
C16orf72
DGKZ
NBN
ATG16L2
EXOSC6
FRA10AC1
COX5A
MOSPD2
FANCB
ERI1
TM7SF3
MED21
COPS7A
NAGK
ACTR10
CKAP5
SPACA9
AK8
PLEKHF2
USP35
KCTD21
HTRA2
DQX1
VHL
SLC66A3
VIRMA
HIC2
RPS15A
NT5C3A
WBP1
INO80B
GYG1
ATN1
PTPN6
C12orf57
ZSWIM1
SPATA25
NEURL2
CTSA
LSM6
TTC21B
ZNF585B
ZNF383
PPP6R2
PARVA
TIPRL
PHF8
POGK
TOMM34
STK4
CLCN7
LZTR1
MED17
PODXL
SLC7A5
ZNF180
MACROD1
TGOLN2
NDUFC1
NAA15
PCDHGA1
TAF7
GPKOW
MAFF
TMEM41A
ZNF131
ADO
PPARD
OLFML2A
NR6A1
PSMG1
URGCP
UBE2D4
SNF8
XPOT
EAPP
POLR3D
CLTB
ERRFI1
SLC39A4
CPSF1
TMEM217
TBC1D22B
GID8
SLC7A6
NOC4L
DDX51
TRIT1
METTL18
C1orf112
PRKAB2
EFCAB2
TAB3
SDC4
KLHL35
EIF4EBP2
VCL
RABIF
PTPRCAP
LRIF1
RPS6KA3
RPS6KB2
RDH5
ITGA7
BLOC1S1
TPRN
TMEM203
NDOR1
DDI2
ARL6IP1
LIG4
ABHD13
TIMM50
MRI1
C19orf53
MICAL2
LCN12
FBXW5
C8G
KIF22
PCSK6
PDCD2
ZCCHC24
RAB6A
GMDS
ZDHHC7
IL4I1
DNAJC24
DCDC1
FAM228B
RALGDS
TP53I3
SF3B6
HLCS
UHMK1
UAP1
PURA
SNAPC4
CRLF3