ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CPSF3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◣ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

FRG2C
DUX4
MAMDC2
MTRNR2L1
CCDC200
H4C14
H3C15
H3C14
H2AC19
H2AC18
FRG2
H4C15
LOC102724770
DGCR6
ARL4D
ZNF335
ZC3H10
RPL41
ESYT1
GH1
CSHL1
ART1
MAPKAPK5
TSN
RABL2B
VPS52
RPS18
B3GALT4
C6orf226
RABL2A
PHF23
GABARAP
DVL2
PGK1
C19orf48
SRD5A1
NSUN2
POLR3F
DZANK1
CACTIN
H4C12
H4C11
ZWILCH
SNAPC5
RPL4
H2BC4
H2AC6
NVL
MTRNR2L2
MSH3
DHFR
EDC4
VPS28
DYNC1LI2
RPL17-C18orf32
RPL17
C18orf32
H4C9
VTI1B
SYCE2
WDR74
H2BC11
H2AC11
NUP85
H2BC15
H2AC15
MRPS7
MIF4GD
GGA3
ICE1
RPL26
KRBA2
VDAC2
H2AZ1
DNAJB14
IPO13
UBE2M
CHMP2A
VEZF1
H2BC14
H2AC14
MUC3A
COX20
IER3
FLOT1
NME6
MYC
SCRIB
STX5
SYNGAP1
PHF1
CUTA
H4C3
H1-6
RWDD1
SUMF2
COL23A1
PRRT2
MAZ
H2BC5
H1-4
SYNRG
OAZ3
REXO1
TMEM242
NRAS
PPP1R10
MRPS18B
ATAT1
GNG14
POLG2
DDX5
CEP95
PSMD12
PRDX2
JUNB
LYRM4
FARS2
SLC35B1
DHPS
H2BC21
H2AC21
H2AC20
MPDU1
LOC100996842
EIF4A1
CD68
S1PR4
NCLN
ATP6V0C
AMDHD2
SUCLG1
RRP36
MEA1
ZNF576
IRGQ
TAOK3
SUDS3
HSPA9
MRPS16
DNAJC9
MRI1
C19orf53
H1-2
CAPRIN1
H3C3
FAM187A
EFTUD2
CCDC103
ZNF34
RPL8
UBE2I
POLR2E
GPX4
NDUFAF3
DALRD3
ID3
MRPL2
KLC4
CUL7
RBBP5
PSMG2
GOSR2
CEP76
UPF2
H4C2
H3C2
H2AC4
NAT10
FAM131A
EPN1
MTRNR2L8
CIRBP
PAGR1
SECISBP2
CKS2
RIT1
FTH1
AKAP8
EXOSC5
BCKDHA
H4C1
MSH4
FAM174C
PACSIN3
ARFGAP2
EIF4A2
SMIM14
CHD2
H4-16
H2AJ
DCTN1
VARS1
PTPN6
C12orf57
ATN1
ZBTB37
NNAT
BLCAP
BEST1
IFITM3
IFITM1
INPP5E
H3C1
H1-1
CTDSP1
RPL22L1
MRPL11
MRPS5
NUP205
ATP5F1E
RPS11
C6orf47
BAG6
APOM
H2BC12
H2AC12
SLC3A2
MVP
DDIT4
HADHB
HADHA
RCC1
HMGB1
STAM2
IFITM2
RAD23A
CALR
SLC35E3
ABTB1
RHBDL1
TLCD1
RPL23A
RAB34
NEK8
PTMA
CDC73
ACTR10
RHOB
JMJD7-PLA2G4B
JMJD7
H3C13
H2BC18
COX7A2L
ZNF581
ZNF580
CCDC106
RPS2
RPL3L
RNF151
NDUFB10
PSMD1
POLR2J3
PRKAG1
TSSK4
PHRF1
WDR24
STUB1
JMJD8
STX10
RNASEK
IER2
HNRNPA1
CBX5
RPLP0
GCN1
SNX16
GGA2
SOX15
HES7
ALOXE3
SLC38A2
C17orf49
BCL6B
EEF1A1
TSNAX
PAK1IP1
C6orf52
SEC61B
COMMD1
CCT4
STAM
PFDN5
MYG1
GPAA1
EXOSC4
TUBB
MDC1
RPL13A
USP29
CXorf38
PCBP1
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
SCAMP3
FAM189B
GADD45B
RPL27A
SART3
ISCU
RPS27A
CLHC1
P4HB
IER5L
SIRT7
PCYT2
MAFG
NAA10
ARHGAP4
RPS23
ATP6AP1L
PRKRIP1
SKP1
NFE2
PI4KB
RABGGTB
ADM
KMT5B
MOGS
WDR37
IDI1
MRM1
DHRS11
SLC39A7
RXRB
RING1
HSD17B8
DPH7
SUPV3L1
SRSF11
ARHGDIA
TMEM107
NADSYN1
DHCR7
USP1
PDAP1
BUD31
SHC1
PYGO2
PBXIP1
LOC101928120
RABL6
CCDC183
PES1
RELA
TMSB4X
MRPL40
HIRA
GPN2
H4C6
RPL13
ZNF653
MAT2A
NDUFA4
ZBTB45
WDR6
PDE4A
MRPL53
TRIM8
SLC27A5
FAM228B
CPNE7
RPL35A
LMLN
IQCG
DAPK3
SGK1
TP53I3
SF3B6
POMZP3
CDK11B
CDK11A
TBK1
ZRANB2
RPL21
UGT1A4
UGT1A3
CCDC34
NUDT1
MRM2
MAD1L1
SNAP47
JMJD4
FLOT2
DHRS13
ADK
EIF2S3
FARSB
HMCES
ATP5MG
UCKL1
IRF2BP2
H4C5
H3C4
H2BC7
H2AC7
EPN2
TM9SF1
IPO4
TMEM230
PCNA
KMT2A
GRAMD2A
NOP53
E2F3
VAMP2
H3C6
SFI1
EIF4ENIF1
HDGF
TUSC2
RASSF1
PTGES2
SH3BGRL3
DONSON
TAF9
RAD17
AK6
TIMM13
FLYWCH1
HYAL2
HMBS
TMEM132A
ZNF285
SELENOF
HS2ST1
MMP24OS
MMP24-AS1-EDEM2
EIF6
ZFP36L1
GET4
FUT11
CHCHD1
BTNL9
EFNA2
ZNF446
ZNF324
NDST2
H4C7
H3C7
H2BC9
MAPK8IP3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MOV10
PEAK3
OAZ1
PSMG1
MAML1
ZNF276
VPS9D1
MID1IP1
H3C12
H2BC17
H2AC17
ZNF628
NAT14
COX18
DPAGT1
CCDC24
H2AX
H4C4
C5orf24
SSC5D
TOM1
GPANK1
CSNK2B
MT2A
SIT1
CCDC107
ARHGEF39
SLC25A11
RNF167
PFN1
ENO3
BRWD1
GTF2A2
PNO1
STPG3
NANOS1
FAM166A
PIN4
SLC25A10
MRPL12
SIX5
DMPK
RPL12
LRSAM1
PDHX
GAPDH
APIP
NFKBIL1
HMGN2
DDX39B
ATP6V1G2
WDR90
MCRIP2
MRPL24
NOLC1
HSPA1B
ADGRA1
LOC105372440
ACP4
ACTL10
TMSB10
IKBKG
G6PD
TM4SF1
AXDND1
FTL
WDR46
RGL2
PFDN6
ID1
CDH24
ZNF48
DYRK1B
NECAB3
CAPNS1
INTS5
GANAB
RPS5
RPS28
NDUFA7
H2BC8
H2AC8
KIF2C
SPATC1L
RECQL4
LRRC14
VPREB1
TRIM37
LRRC24
C8orf82
BAZ2A
STAG1
GADD45GIP1
DEFA5
ARHGAP39
CD79A
ZFX
SETD1A
ORAI3
ARHGEF1
CYRIB
WBP1
INO80B
AVPI1
IGF2BP3
VWA7
NPM3
FGF8
H3C10
H2BC13
H2AC13
PCBD2
RPS29
SURF6
CDK16
NXF1
CISD3
THAP9
SEC31A
SCFD1
RCOR3
MDP1
CHMP4A
TAF10
RRP8
ILK
EXOSC6
VARS2
GTF2H4
SLC50A1
EFNA1
TPP1
TUBGCP6
HDAC10
PIP4K2B
PNMA1
TNFRSF12A
THOC6
HCFC1R1
CLDN6
PHLDA1
ZNF513
SLC39A4
TRIM65
NOP14
GRK4
RPL10
CCDC138
RPL3
PDCD2L
GMPPB
AMIGO3
RPL37
ANAPC7
FOSL1
FIBP
CCDC85B
MAN2C1
TEDC2
DRAP1
C11orf68
GOLGA5
UQCC3
LBHD1
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
FBF1
ZNF771
H4C8
UBC
SELENOH
MRPL38
CSKMT
C11orf98
RPL35
ARPC5L
CD320
NELFB
POLD1
NR1H2
ATP5F1B
HAGHL
CCDC78
ANTKMT
RCE1
SPHK2
TBCK
AIMP1
RXYLT1
NKIRAS1
TMED1
GSTO2
SPACA4
RPL18
FAM83E
UNK
H3-3B
CEBPB
XRN1
TARBP2
MAP3K12
MRPL28
CDC42EP1
MRTO4
EMC1
LDHC
DNASE1L1
EIF1
RPS15A
MRPS34
EME2
SPOUT1
RHOT2
SMC2
KLHL11
FADS2
FADS1
TSEN54
LLGL2
MTA2
SNAPC4
BAG2
UBTF
NOP56
SNX14
TMEM223
TMEM179B
SNX17
EIF2B4
METRN
HAX1
ECI1
STYX
DPM3
NME3
MT1M
MT1E
MAPKBP1
PIP5KL1
DPM2
BICRA
TUT1
SP3
UPF3A
TUBB4B
NAPRT
MROH6
YJU2
NRIP1
ZGLP1
TSC22D1
FDX2
IMPDH2
H3-3A
ALLC
TTC8
MAF1
C7orf26
PWP2
LOC102724159
ARF3
LAMP1
CASKIN2
HPDL
P2RY11
EIF3G
INPP5K
WDR38
TYMP
SCO2
ODF3B
CELF1
MLLT6
TFAP2A
BTBD18
GLRX2
CYB561D1
UXT
ELK1
MATR3
WDR97
DPH6
WDR45
PRAF2
OGFOD2
ARL6IP4
TTC33
MST1
GATD3B
GATD3A
EAPP
RPS12
GAS2L1
COASY
FNBP1
ROPN1L
MLX
PPAN-P2RY11
PPAN
ULK3
OR6B2
NDUFA10
CDKN1C
PRELID3B
SRSF4
LMNB1
SNX9
RBM4
LRRC6
RILP
MED1
CDK12
TRIP6
SRRT
CTNNAL1
PROCA1
USP21
UFC1
TOP1MT
PPOX
RPL7
RDH10
TOB2
GTF3C4
DDX31
HOXA3
MUC1
NDUFS3
KBTBD4
FAM180B
THOC5
IDH3B
FAM104A
C17orf80
RNF225
ZNF35
LARP1
ZBTB26
RABGAP1
DUSP2
ASTL
ZNRD2
FAM89B
EHBP1L1
MARCHF6
VPS4A
TRABD
ARID5B
SLC39A1
CRTC2
CREB3L4
GPS2
EIF5A
IGF1R
TTYH2
RPL38
PABPN1
ICA1L
RBKS
BABAM2
AGO3
RPN1
DENR
TMEM109
SLC35A2
PIM2
ZBTB12
EHMT2
C2
KIF27
DYNLL1
ABCB6
FADD
ANAPC4
ISL2
SLC25A39
NAA80
IFRD2
HYAL3
WDR81
RAB40C
BCAP29
ATXN2
RPL6
TAOK2
TUBA1B
CITED4
TSC1
PYCR3
GFI1B
NFKBIA
GAGE2A
ABHD17A
UBB
CENPA
URGCP
POLR2C
SAR1A
PIDD1
ZNF865
ZNF524
NME4
FIZ1
DECR2
LY6L
GFAP
PHOX2A
AP3M1
CNPY2
TRIM41
TIGD5
RPL15
PATZ1
EEF1D
APOLD1
NOXO1
MEMO1
SYF2
RGS19
OPRL1
LKAAEAR1
URGCP-MRPS24
ABCF3
CALM2
GMEB2
ENAH
TSKU
DRD4
DENND4B
SLC12A6
NUTM1
NOP10
SPEN
PRDM10
CDKN1B
FAM210B
C16orf46
FSTL3
ZCWPW1
PPP1R35
MEPCE
ATF4
RPEL1
PPFIA4
SLC35B2
HSP90AB1
SRCAP
LOC730183
SFN
ST3GAL3
LRP6
ADNP
SPDYE5
POM121C
ZBTB22
TAPBP
SLC25A22
LGALS2
DAXX
PACS1
MFSD3
ZNHIT2
TM7SF2
MRPL49
H2BU1
H2AW
FAU
MYL6B
MYL6
HNRNPU
SAMD1
C19orf67
TMPPE
GLB1
CCDC97
PNRC1
PROSER1
NHLRC3
PPP1R37
HMGA1
TXNIP
RPL19
PCF11
CACNB1
PRMT3
LRRC37A3
GAMT
BRF2
GAGE2B
CASP6
SFT2D3
USP34
LENG9
GTF2IRD2B
GTF2IRD2
SLC25A42
CAMK2N2
TCTEX1D2
ATXN7L2
SEC14L1
SMIM22
ROGDI
H3C8
H2BC10
TLL2
CELSR3
NUDT4B
NUDT4
GFER
PGP
CENPVL3
RACK1
ROMO1
CRK
PPP3CB
TIGD3
THEM6
CSNK1G1
CSRNP2
CACFD1
CRELD1
PLPP5
LY6G5B
RABGEF1
C19orf71
MLXIP
SRF
WDR27
SLC16A3
C6orf120
SELENOO
BAHCC1
C1QTNF8
GPX1
ADAT1
SLC5A5
RPL18A
NOL7
CS
ANKLE2
TRIM52
S100A6
S100A5
MVB12A
GINS2
OTUD7B
LRP2BP
ANKRD37
SH2D3C
PAF1