ChIP-Atlas: Target genes

Potential target genes for RFX3

Query protein: RFX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2636180 | Hep G2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX3's Target genes

◢ RFX3: Average

◢ SRX2636179: Hep G2

◣ SRX2636180: Hep G2

◢ SRX23177031: PLC/PRF/5

◢ SRX23177032: PLC/PRF/5

◢ RFX3: STRING

TMEM9
ZBBX
C1orf159
NPAS4
CFAP54
LRRC6
MAMDC2
NDRG4
ZNF497
A1BG
CHURC1-FNTB
CHURC1
NEK10
TTC23L
POLD3
FOXJ1
KLHL18
KIF9
YIF1A
TMEM151A
SDCBP2
BTBD3
ZBTB46
TTLL9
DUSP15
KIF3B
FKBPL
ATF6B
DYNC2LI1
CFAP36
WFDC3
DNTTIP1
BRCA1
DNAH7
PRR29
ICAM2
CEP41
PDE4A
C11orf49
UBL5
PIN1
LRGUK
MAPRE2
HSDL1
DNAAF1
SNRPF
RUNDC1
PTGES3L-AARSD1
PTGES3L
TM9SF1
IPO4
PITPNM1
DAD1
ABHD4
ZSWIM1
SPATA25
CTSA
RAB11FIP2
ACOX3
POLL
DPCD
NPHP1
MTLN
ACTR6
LOC112694756
IQCH
AAGAB
DYNLRB2
ZFHX2
THTPA
TTF1
CFAP77
TOR2A
MRPS2
C9orf116
CTU1
NME9
PMVK
SPEF1
CENPB
CDC25B
TNNI3
DNAAF3
SPATA2L
POLRMT
FGF22
FANK1
TRIT1
DYNC2I1
INTU
FZR1
DOHH
EFHC1
CCDC8
RHOD
CCDC113
ABAT
CEP112
LRPAP1
MFSD4B
DCP1B
ACACB
AHI1
ZNF584
RNF225
PPP1R21
TEKT1
PI4K2A
MORN4
PRKN
PACRG
OVCA2
CCDC34
CRB2
PES1
PSMC3IP
SYS1
PRKCG
RSPH14
RAB36
S100B
ZNF84
QTRT1
BBS1
LMBRD1
CAMK2N1
EBNA1BP2
CFAP57
CSNK1G2
AZIN2
CARS1
WDR35
ANGEL1
PREPL
CAMKMT
MEAK7
TSNAXIP1
RANBP10
WDR93
PEX11A
C7orf50
AGTRAP
LENG1
LARGE1
NCOA5
RPP38
ACBD7
CFAP43
UBXN6
AGPAT5
CFAP69
MTRNR2L2
MSH3
DHFR
PATZ1
SHQ1
ARFGAP1
CSNK1G1
CCDC39
NRSN2
PFDN5
MYG1
MOCS3
DPM1
DYNLL1
UBE2O
AANAT
C16orf46
BDP1
XKR7
GNG14
FBXW9
TTLL1
POR
TBCEL-TECTA
TBCEL
DAGLA
TXNDC17
KIAA0753
UBXN11
EPHX3
STK32C
LRRC27
QTRT2
CCDC191
PROSER3
LIN37
HSPB6
FAM110A
COG7
ADGB
HSP90B1
ABI2
JAM3
SPAG8
HINT2
C2orf73
POMT2
GSTZ1
KIAA1841
HSPH1
ELMOD2
RALB
PGP
E4F1
PCOTH
MIPEP
C1QTNF9B
RFC5
SLF1
KIAA0825
SLC37A1
RSPH1
TRAPPC9
RPL35A
LMLN
IQCG
KRT8
WDR54
C2orf81
USP30
THNSL1
KIF23
SPAG16
FAAP24
CEP89
TTC30A
FAM24A
C11orf94
TRIP12
FBXO36
SCRN2
OSBPL7
LRRC46
ZMYND12
PPCS
CCDC30
TBC1D19
PRKAR1A
FAM204A
AP1S1
SORBS2
DRC7
NUDT2
KIF24
TMX4
ARL6
SIK3
ARL4A
OTUB1
RALGAPA1
ZNF446
ZNF324
TSPYL4
DSE
ALLC
CALR3
C19orf44
MORN2
DHX57
SPEF2
DNAJC16
CASP9
ZFP90
SPTBN2
DMWD
FSIP1
NR1D1
CRNKL1
CFAP61
L3MBTL2
ENTPD5
BBOF1
DNAH2
LIN28A
NUCB2
CFAP126
DUSP3
CFAP97D1
YWHAQ
ENDOV
ARMC3
STK11IP
KATNIP
GTF3C1
RNF40
CCDC189
CCDC130
NDUFA5
B9D1
NR2F2
GTF2E2
INSM2
SF1
SF3A1
CCDC157
PTPN1
EFCAB12
MAFA
WDR31
BSPRY
SIPA1L1
MTRNR2L1
PER2
PPAN-P2RY11
PPAN
P2RY11
ANGPTL6
DNAJC1
SERINC3
PKIG
TMEM107
HMG20B
TP53BP1
ZCCHC3
C20orf96
ING2
DYNC2H1
MAP1A
FBXL13
ARMC10
TMEM53
ARMH1
STOML2
PIGO
FAM214B
CACUL1
IQANK1
FAM83H
MIB2
ID1
ZNF184
CATIP
YIPF3
POLR1C
LRRC73
TMEM231
GABARAPL2
MOK
PACRGL
GRIN1
MBD4
IFT122
PIFO
TTC30B
MIER1
DNAI4
CFAP53
IQSEC3
KLHL38
ELP1
ABITRAM
DNAJB13
CHCHD3
TOM1L2
DRC3
PHC1
VAT1
RND2
KIF6
RFC2
LRRC56
HRAS
RNF141
C17orf97
DYNC2I2
CHN1
SPATA2
ALS2
EFCAB10
IFT81
ZNF473
VRK3
TASP1
PRKCSH
CCDC151
RFX3
GTF3C4
DDX31
METRN
FBXL16
RNF139
DLG4
ACADVL
CFAP58
RFX1
ETFRF1
CFAP94
JUNB
SLC25A27
CYP39A1
RPN1
ID2
TOP1MT
RHPN1
TADA2B
CCDC96
DNAAF4
NAA40
TMEM211
SMG7
IQCE
ERF
MTRNR2L8
ALMS1
H1-10
RPGRIP1L
FTO
TTC26
NEK2
SRFBP1
CFAP46
FOXN2
NYAP1
HMGCR
DYRK1A
ZNHIT1
PLOD3
NDUFS3
KBTBD4
FAM180B
GTF2IRD2B
GTF2IRD2
TMF1
PAK4
ITSN1
CRYZL1
MZF1
THOP1
SGTA
KNOP1
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
PODNL1
DCAF15
UVRAG
BCL2L1
POLI
FBXW7
TLX2
PCGF1
LBX2
PRMT5
IFT22
ZC3H10
RPL41
ESYT1
WHRN
C20orf27
ZNF324B
SPATA4
RPS27A
CLHC1
ARRDC4
SUN3
C7orf57
ANO3
CYTH2
USP54
NECTIN4
KLHDC9
ODF2
FAM214A
PRDM4
REEP6
PCSK4
BTRC
LOC101928764
GSG1
FOXN3
SYT5
PPP2R1A
TMED8
SAMD15
TBC1D16
CCDC40
WDR90
MCRIP2
MARCHF8
HMGN2
DNAJA1
APTX
YWHAE
SPACA9
AK8
PRKAR1B
SPICE1
PPP1R16A
FOXH1
PIH1D2
NKAPD1
RPS5
FAM183A
U2AF2
CCDC106
CEP162
VTA1
NMBR
TFIP11
IFT140
CRAMP1
TSEN2
TBC1D32
CEP152
PCSK1N
ERAS
PARD6A
C16orf86
ACD
MUC1
CPLANE2
C16orf71
ANKS3
NQO2
ODF3L1
MAP3K14
DUSP1
C11orf97
MSH5
DDAH2
CLIC1
TRIM36
AXDND1
TSGA10
C2orf15
PALM3
RTF2
MKS1
TPGS1
POFUT2
LOC728392
SAXO2
EFL1
LPIN2
TDRP
FAM151B
ZNF24
NUMA1
LRTOMT
RNF39
PPP1R11
POLR1H
PCNX4
FAM187A
EFTUD2
CCDC103
KCNH7
KMT5C
TENT5C
TRAF3IP1
PIK3R2
RER1
MORN1
SSBP4
UBN2
PBX3
CCDC175
ARHGDIB
SETD1A
ORAI3
C3orf49
TMEM67
YWHAZ
PJA2
SEMA4B
CLUAP1
C16orf90
DUX4
WDR73
NMB
SPAG9
CCDC65
OSCP1
TSPO
MCAT
ZNF768
ZNF747
BBS5
SLC25A14
SLCO2B1
SPATA13
RHBDD2
LRRC23
GPR137
KCNK4
BAD
SRSF7
CALML4
CCDC57
HSPBP1
BRSK1
ZEB1
FAM185A
IFT172
GCKR
FNDC4
PSMB3
PCGF2
RPL36
MICOS13
HSD11B1L
NME7
BLZF1
MRPS21
ZFYVE28
CFAP99
PRR7
DBN1
IQCC
DCDC2B
CCDC28B
THAP10
LRRC49
PANK2
SIK1B
SIK1
EHD1
MFSD6
FANCI
TRAPPC2L
GALNS
CCDC146
CDC37
TECPR2
CINP
METTL15
KIF18A
MAF1
CYC1
MID1IP1
LINS1
ASB7
TNPO1
CXADR
CFAP298-TCP10L
CFAP298
ESRRA
CATSPERZ
PICK1
MX2
SFXN2
ARL3
TCTN3
TULP3
MYCBP
GJA9
ACAP2
CATSPERG
LOC388282
KIFC3
DYRK3
DAAM1
RNF5
AGPAT1
AGER
SPG21
COQ7
WDR74
STX5
LTV1
MLEC
LOC102724770
DGCR6
MAP1LC3A
FAM174A
FAM86B2
CCPG1
C15orf65
LOC390877
MAPRE3
ATP23
GTF2F1
TEX9
CEP126
ANGPTL5
SLC25A3
VPS53
INTS8
DZIP1
TMEM234
EIF3I
RRP12
PELI1
CEP295NL
WDR1
AHNAK
CEP135
ARF3
THBS3
MTX1
BRD3OS
MUL1
SETD4
CBR1
KLF16
PLEKHB1
COPS3
TUBE1
FAM229B
ABHD11
RBKS
BABAM2
NAA20
PRR3
GNL1
MORN3
RIN1
BRMS1
ITGB3BP
EFCAB7
SMARCAD1
CRYAA2
CRYAA
POLR3F
DZANK1
SPATA24
PROB1
DNAJC10
NAGPA
ICA1L
ZC3H18
TSPAN31
MARCHF9
CDK4
HIGD2B
BBS4
NKX1-1
TUBAL3
NET1
DNAAF2
FAM131C
EIF2S1
ATP6V1D
SPCS1
GLT8D1
E2F3
PKP4
CCDC148
SREK1
CFAP20
ZNF579
ZIM2
PEG3
E2F8
PPP2R5E
MNS1
NEK11
ASTE1
MYADM
IFT57
POLR3H
KDELR3
KCNJ4
ERICH6
FBF1
PARS2
PUM1
FAM86B1
PLIN5
LRG1
RUFY1
HM13
GLRX5
ZNF628
SSC5D
NAT14
STK35
TMEM74B
OSBPL2
CCDC74B
CFAP299
SPATA17
GPATCH2
B4GAT1
ZNF775
KIAA1522
RABL2A
POLD2
SPATA33
KIAA0319
MSMO1
EIF2S2
DNAL4
ZNF165
OR1F12
ZDHHC1
BAIAP2
TSPAN19
LRRIQ1
ZMAT2
HARS2
HARS1
RUFY2
CEP164
CHERP
DUSP6
TUBA4B
TUBA4A
STK16
GLB1L
TMEM88
NAA38
CYB5D1
TRMT12
ROPN1L
TEX264
PLCH1
IRAK1BP1
CCDC74A
TEDC1
CRIP2
CRIP1
MCM7
AP4M1
P4HA1
GAS8
DBNDD1
PLAA
IFT74
RABL2B
RNF223
SPAG1
POLR2K
MARK3
GLRA1
GNAT2
AMPD2
FLACC1
ZNF664-RFLNA
ZNF664
CCDC92
RASL10A
GAS2L1
MFRP
C1QTNF5
ERCC1
DENND2B
TMEM91
B9D2
TCTN2
FAM227B
DTWD1
SDE2
MDH1B
FASTKD2
BAIAP3
TIGD4
ARFIP1
PEF1
SLC25A22
PIDD1
CEND1
LYRM4
FARS2
ST18
DNAH12
WWOX
BBS12
SLC27A1
NXNL1
DNAJC24
DCDC1
ZNF214
NLRP14
UBL3
DUSP18
TNRC6A
C12orf43
NEMP1
NAP1L1
GOLGB1
WDR19
ZNF862
MTRNR2L9
STK36
RNF25
LMAN2L
AJM1
NQO1
SLC35E1
HSPA12A
ENO4
MTF1
TCTN1
ENTPD7
NACAD
UBXN2B
HSBP1
MEAF6
DYRK4
KLHDC10
CCNB1
TPST1
RAB3GAP1
FAM120B
TOR3A
PYGO2
PBXIP1
LOC101928120
JUND
IQCN
TTC7A
MCFD2
TIMM21
FBXO15
ING1
CARS2
ALKBH5
FOXO6
REPIN1
INKA2
DNAL1
XPR1
TPM3
PGD
SPATA6
FER
C4orf48
HNF4A
CLBA1
AHNAK2
SYNGR3
NOXO1
GFER
KCNN1
DSTN
BFSP1
HTR5A
SRF
CUL9
PPP5C
PNMA1
PPP1R42
SPATA7
COPB2
EPN1
SFI1
EIF4ENIF1
PCF11
CENPH
RSPH4A
RSPH3
SLC25A46
HSPA1B
PLXNB1
DNAAF6
CEP43
TMEM134
AIP
NDUFAF3
DALRD3
THG1L
ZNF76
DHX40
DIS3
SSX2IP
C2orf50
PSMB5
PSMB11
ARL2BP
GNG3
BSCL2
PLA2G2A
TAGLN2
CDX2
CYSTM1
MBNL2
SHOC2
BBIP1
FAM174C
CIRBP
MICOS10-NBL1
MICOS10
NBR1
ZNF396
WIPF2
PBX2
GPSM3
FHAD1
ZNHIT2
TM7SF2
MRPL49
FAU
WDPCP
MDH1
IPO11
DIMT1
NIM1K
TMX2
MED19
PDCD6
HIPK3
MNT