ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX017710 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◣ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

ZNFX1
EEF1A1
EIF3E
KRT36
WDR74
H2AC19
H2AC18
GTF2B
B2M
POLDIP3
FUS
TRAF7
PRDX1
SRSF7
H2BC11
H2AC11
H2BC21
H2AC20
NME1
RCC1
RPS29
DDX5
CEP95
RPL28
MAGOH
SRSF2
MFSD11
TUBB4B
NAT10
RPS27
PMAIP1
RPS20
RANBP2
ANGEL1
LY9
CWF19L1
RPLP1
TFPT
PRPF31
SSNA1
ANAPC2
RPL27
BTG1
ZC3H10
CSRNP1
H2AC21
SNX5
MGME1
H2AX
RPL10
IFRD1
MRPL44
H4C3
MFSD4B
RPL29
ZBTB37
DEF6
H2BC5
RPTOR
H4C14
SIRT4
NDUFS7
SH2D2A
NTRK1
CALM2
HNRNPA1
CBX5
GIPR
DENR
THBS4
MTX3
TAF12
TRMT61B
IRF1
HSP90AB1
ZBTB40
IRF9
EIF4G2
JUN
PSMD9
HPD
CAMLG
CLK1
IQGAP2
NOLC1
MRPS23
HERPUD1
CWC25
VPS72
ZBTB4
POLR2A
RAB7A
ZZEF1
CYB5D2
H2BC8
H2AC8
NUFIP1
GPALPP1
BCL2A1
GADD45B
TMEM39A
AMZ2
NOP58
RANGAP1
MTF2
NUP62
IL4I1
ATF5
H4C12
BCAR3
HAX1
RPLP2
NOC4L
DDX51
TNF
NPAS4
YARS1
S100PBP
GALK2
COPS2
ATP5MC3
TUT1
SLC7A5
RPL23A
IL21R
EHD1
DDX19A
SSBP1
RPS13
HPS5
GTF2H1
EEF2
RSL1D1
NR1H3
CKS2
ACP2
CCDC91
APTX
SDCBP2
RPL10A
ITPR1
DNAJA3
DDIT4
PPP4R3A
CENPM
ATF3
LUC7L2
FMC1-LUC7L2
FMC1
SRGN
C16orf91
MRPS14
H4C11
SIRT6
PTBP1
ID2
ANKRD24
XPC
PCNA
MRPL24
LSM3
STK40
BRD2
YTHDC1
RUNX1
SLC1A5
HNRNPH1
RPS6
ILF3
CCNL1
PRMT5
PPP1R10
MRPS18B
DDX21
CCT8
H4C4
DCP1A
RAD23A
MAK16
EIF1
RPLP0
SRSF5
SAR1B
RMND1
MMACHC
ARMT1
H4C15
EIF4A1
KCNAB2
ITGAL
GFM2
EIF3K
TXNRD1
SLFN13
SEPTIN7
MRPS25
INO80B
COX5B
OXSM
NGLY1
RRM1
CDV3
BTF3
H2BC12
H2AC12
SLC3A2
STOML2
SRSF1
MYL6B
ZNF106
OCIAD1
NDUFB5
MRPL47
CXXC1
ASXL2
TNFSF14
METTL16
CSTF1
AURKA
RPL12
LRSAM1
GABPA
ATP5PF
NUTM1
NOP10
TSSC4
RAB6A
EIF3J
UBE2I
SKP1
NUP214
DNAJB4
THADA
SCAF11
LY96
LAX1
HNRNPA3
FBXW9
CHPF2
RBM3
HMGN4
ENO1
DPP9
ANAPC10
ABCE1
SMG5
SFPQ
RPS15
RGPD8
RGPD5
PPIL4
KMT2D
SHISA5
RPL9
RPL15
NKIRAS1
LRRFIP2
LONP1
LIAS
CATSPERD
H2BC4
H2AC6
PAFAH2
NAA16
MTRF1
MRPL30
MITD1
FAM241A
CCNT1
C2orf42
FADD
MAPKAPK5
PSMB3
MRRF
IER5
TSPYL2
NOB1
NABP1
DNAJC16
AIM2
FBXO31
POLR3E
RPS4X
VTA1
TMEM101
SUPT5H
NUP54
NMBR
KRR1
DDI2
METTL3
H3C1
ATP13A1
ZNF132
RHBDD1
CHD8
ASB8
HNRNPAB
ZNF207
SERP1
RFFL
EIF2A
RPS2
IER3
SNX1
SNRPE
RBMX
DIP2B
MRFAP1
GPN2
SAMD4B
PNP
EHD4
VASP
SH2D1A
RPL22L1
RGL4
CCAR2
CASP8
BORCS5
APOBR
HSP90AA1
STT3A
WDPCP
MSL2
MDH1
CDK12
C1orf53
SEMA3B
ZNF764
PWP2
MTHFD2
MORC3
LOC102724159
C8orf37
B3GAT3
C19orf48
DDX39B
SMIM12
SERBP1
RPL14
NASP
MRPL55
ITPRIP
IL23R
CRADD
ATP5MC2
TRMT2A
RSL24D1
RANBP1
NECAP1
HEXIM1
DDIT3
TMEM259
WDR4
HSD17B12
CCDC107
ATG5
RPL38
TRAFD1
QTRT2
PRPF19
EPRS1
DLG4
CCDC191
ALG1
TCTA
SF3A3
RHOA
PPP1R8
POLA2
CITED2
BTRC
ZNF3
TXN2
RETSAT
PKNOX1
ELMOD3
H3-3B
SPHK2
SPATA5L1
RPL18
NFYC
MZF1
METTL1
MED18
LARS2
H2BC18
GATM
EEF1AKMT3
CCR7
TTC26
THOC1
RPL7
RDH10
NUFIP2
ALG10B
IMPDH2
RBPJ
KSR1
DSTYK
H1-4
CIRBP
RPS12
NOCT
ZNF668
ZNF646
SHF
CD96
XRRA1
SPRYD4
SPCS2
RAB11A
POU2AF1
POLR3B
GPR68
GOPC
VMAC
TRA2B
PPP1R15A
NDUFA11
KIF15
KIAA1143
COX8A
TICAM2
PURB
SP2
WDR90
MOK
COG3
ZNF589
USP4
SF3B1
SCAND1
PAGR1
CLTC
RPL34
MLH1
EPM2AIP1
CD55
ZNF280C
TOGARAM1
POLG
NOL7
MORF4L1
METTL26
KLHL28
CLEC2D
CCDC174
MCCC1
KANSL2
FBRS
JUNB
USPL1
RBM25
PRRC2C
NOP16
MORN3
HMGB1
HIGD2A
GTF2H3
EIF2B1
CLP1
MAP2K7
NXF1
IPO4
AP2B1
MRPS7
GGA3
ELK4
LBH
RRNAD1
ISG20L2
DNAJB2
TATDN2
TAP1
SNX9
RPL5
RPF2
PSMB9
IL10RA
ELOC
XPOT
TBRG4
MRPL45
ENOSF1
RPS3A
PLD6
PDCD1
NDUFB6
N6AMT1
MFSD8
GPR183
EID2B
AMN1
ABHD18
SPTBN4
BLVRB
SECISBP2
HIBADH
TOMM20
TAF1D
SLMAP
PPAN-P2RY11
PPAN
C11orf54
STX11
TRMT112
PRDX5
PNPLA8
NPM1
ERLIN1
EMP1
EIF3D
TUBA1C
TTPAL
TMF1
CREM
ABCD3
G3BP1
FAF1
PPME1
NFU1
HNRNPC
HM13
CLK4
C2CD3
OTUD6B
ZBTB11
SLC25A23
NACA
FAM227B
DTWD1
CSNK1A1
LARP1
DYNC2I1
WRAP53
TP53
MIS18A
IPO7
EIF4B
CD247
HDAC4
RBM7
PSMD3
PBRM1
OSM
LSM14A
GNL3
C11orf71
MKRN2
LDHA
HINT3
GATB
ABCA5
KHDRBS1
SF3B5
SELENOI
NSRP1
FAM71D
ADGRF3
FARSB
TRAPPC4
SNX17
RPS25
MARS1
GPR137
EIF2B4
ARHGAP9
MAT2A
TOMM5
NUP205
MFAP1
KTI12
ARF4
ZNF248
TXNDC9
TIMM17A
SEC14L1
PRDM1
PHB2
NUP42
KXD1
EIF5B
CDK13
TOMM40
TRMT10C
NR1H2
UTP25
PPP1R11
NDUFAF5
MIDEAS
HILPDA
ETFBKMT
ESF1
NIP7
IARS1
ESCO1
DUSP11
COG8
WDR19
RAB18
LOC100289561
TMEM186
PMM2
HBS1L
RPL41
VCPKMT
STX4
GUF1
ARIH2
MFSD14A
PREPL
OAZ1
MRPS15
DUS3L
CAMKMT
ZNHIT1
ZNF33A
SLC30A6
PLOD3
MRPL20
DCLRE1B
AP4B1
TRMO
ZMPSTE24
RPS24
EBAG9
XRCC2
DIAPH1
ATF1
TXN
LONP2
ABCC11
TAMM41
RNF34
GPN3
FAM216A
TMEM248
VPS29
RAD9B
GREB1
CASP7
PDZK1
FKBP4
ADAMTSL5
RNF223
RPS6KL1
OVOL2
TFF1
TPD52L1
CYP1B1
CHPT1
CCDC88C
TIPARP
SLC25A24
MCF2L
AMZ1
AKAP1
MANEAL
NFKBIA
NAB2
TMEM229B
PLEKHH1
LY6E
C1QTNF6
USP31
FOXK1
ZNF185
UPF1
CABLES2
LAMC1
DOK7
TTC39A
RGS10
KEAP1
TFAP2C
LYPD6B
AFF1
VPS26C
CRKL
FBP1
CST6
CCN5
RAB40C
DMRT2
TBX2
SEPTIN9
KIF21A
UNKL
DECR1
SLC25A36
SLC25A42
CBWD5
CBWD3
C1orf162
FMN1
VWA2
CXXC5
SPATC1L
CBWD6
BRI3BP
MTRNR2L2
MICOS10-NBL1
MICOS10
TTC6
FOXA1
DNPEP
SNAI1
COLEC12
CLASP2
MTRNR2L8
UGT2B15
TCIRG1
SERPINA1
ANXA9
RCOR3
LATS1
ACACB
FUT4
TUBA1A
TPD52L2
YPEL2
TMED8
SYNE3
ANKRD2
ACIN1
GPSM1
IKBKG
DSN1
EHF
VEPH1
ZNF346
MYZAP
GCOM1
TLE1
NIPSNAP2
CCNP
NT5DC3
TP53I3
PNKD
PRUNE1
MINDY1
CFAP206
PERP
SLC25A19
HSPB8
LRRC58
PRSS27
CAP2
ARID5B
LOC102723996
ICOSLG
ADARB1
RGPD2
RGPD1
MTRNR2L9
WNT16
LONRF2
PGLYRP2
NPEPPS
ZFYVE28
CFAP99
MCRIP2
SHANK2
MTRNR2L10
TTC39C
POLR3F
DZANK1
SYT12
CCDC200
RNF144A
KCTD11
DNM2
TST
PCYT1A
RTEL1
CYP4F11
ARHGEF16
HK1
GRAMD1A
IL20
LEMD2
ROBO3
RPS6KA2
RFX1
OBSL1
INHA
CASKIN2
SLC45A4
NLK
HNRNPL
FGFBP2
TNS1
DMPK
LTBP1
OSBP
FRMD5
CDH18
EXT2
TBXA2R
EVI5L
RALGPS2
MTRNR2L6
SLC29A1
SLC10A3
OAZ3
DLC1
NAIP
SNX10
BCL3
TOM1L2
DRC3
HOMER2
PRSS22
ARFGEF2
FNIP2
KLRF2
CIC
B3GNT6
GATAD2A
ITGB2
SSTR2
ZNF687
ZNF552
MEF2A
PABPN1
ASPG
SHCBP1L
ZNF746
BHLHE40
PCIF1
FBH1
ESR1
ANKRD16
VASN
TPBG
CRK
ZNF385B
PTP4A2
AMOTL2
PTMA
SETD2
PAQR5
STC2
HUWE1
ABCA3
PDCD6IP
ANKHD1-EIF4EBP3
ANKHD1
KHSRP
MICAL3
USP17L15
UNC5B
RBBP5
BATF
PKIB
ANAPC7
NUP85
LRRC26
TTC21B
TM7SF2
SLC16A3
KDM4B
EXOSC5
BCKDHA
CACNA1H
MEIS1
CSK
SH3BGR
LCA5L
SLC19A1
ACBD6
DYSF
SLC25A25
NAIF1
ZBTB5
SMAD3
RHOBTB1
SART3
ISCU
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RAB5B
HRK
UFM1
TRIM2
PNO1
SF3B3
COG4
FBN1
IRF2BPL
UBE2L3
MYH11
HSH2D
ZNF576
IRGQ
GOSR2
PSMD12
SH2D3C
DCLK1
ZNF654
CGGBP1
TSN
MAP3K11
SLC11A2
ITGB3
SEMA4G
PCTP
NVL
DLL3
BLCAP
ZNF335
ZRANB2
ITPK1
CUEDC1
PPP2R3A
PAX9
KCTD1
SP1
RP1
PROP1
NR0B2
IL17RB
CHDH
APPL2
SLC7A2
SLC27A2
RABL2B
FBXO34
CACTIN
NCOA7
STAM
NBPF1
GAGE2A
TANGO6
SULT1A4
SULT1A3
TOB1
NME6
EFTUD2
CCDC103
FGF18
C4orf19
MAF1
NDRG2
ARHGEF40
PKM
PHACTR2
NUDT4B
NUDT4
FIBCD1
ARRB1
ZBTB7A
SEC14L5
HSPA9
PROSER1
NHLRC3
UQCRH
LRRC41
UPF2
JUND
ARRDC2
RAB11B
RABL2A
SESN1
MACIR
TBC1D10B
MYLPF
STMN3
PI4KB
FAM3C
SEC61B
NOTCH2NLC
NOTCH2
SRD5A1
NSUN2
CEBPD
OVOL1
AP3M1
ADK
CDH1
ASXL1
ACE
TMEM17
RORC
HADHB
HADHA
CYP3A43
P2RX7
PLXNB2
GSTA4
JAKMIP1