ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932063 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◣ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
CASP7
FKBP4
PDZK1
OVOL2
ADAMTSL5
RNF223
TFF1
TPD52L1
RPS6KL1
CYP1B1
CHPT1
TMEM229B
PLEKHH1
CCDC88C
TIPARP
UPF1
AKAP1
AMZ1
MANEAL
USP31
SLC25A24
NFKBIA
FOXK1
ZNF185
TFAP2C
NAB2
C1QTNF6
RGS10
MCF2L
LY6E
LAMC1
DMRT2
FBP1
CABLES2
KEAP1
DECR1
EHF
SPTBN4
BLVRB
KIF21A
C1orf162
FMN1
DOK7
CCN5
COLEC12
TBX2
VPS26C
CBWD5
CBWD3
VWA2
TTC39A
ACACB
AFF1
YPEL2
LYPD6B
TMED8
RAB40C
UNKL
CRKL
SEPTIN9
SLC25A42
RCOR3
SERPINA1
DNPEP
CST6
SLC25A36
CBWD6
ZBTB37
IKBKG
BRI3BP
FUT4
TLE1
UGT2B15
TUBA1A
LOC102723996
ICOSLG
ANKRD2
GPSM1
VEPH1
ZNF346
CXXC5
SYNE3
DSN1
LATS1
CCNP
MYZAP
GCOM1
CDH18
NPEPPS
TTC6
FOXA1
SHANK2
MICOS10-NBL1
MICOS10
TPD52L2
NIPSNAP2
NT5DC3
LRRC58
ADARB1
PERP
CFAP206
TCIRG1
PCYT1A
TTC39C
WNT16
ZNF552
LONRF2
TP53I3
RHOBTB1
CLASP2
SNAI1
PGLYRP2
ZNF385B
ANXA9
ARID5B
GRAMD1A
ROBO3
PRUNE1
MINDY1
PRSS22
PAX9
ACIN1
PTMA
SLC45A4
HSPB8
CAP2
KLRF2
MCRIP2
RNF144A
IL20
HOMER2
PRSS27
CYP4F11
SNX10
SLC1A5
PAQR5
MEF2A
TBXA2R
TNS1
SSTR2
OBSL1
INHA
TPBG
CCDC200
FRMD5
ZFYVE28
CFAP99
TST
P2RX7
PNKD
FADD
BCL3
ERG
EXT2
ITGB2
CACNA1H
FGFBP2
HK1
NR0B2
MVB12B
ARFGEF2
SLC19A1
NAIP
PTP4A2
ABCA3
DCLK1
SH3BGR
LCA5L
RALGPS2
DLC1
KCTD11
ARRB1
ZNF823
PKD2L2
SLC27A2
FAM3C
RPS6KA2
FNIP2
CUEDC1
CASKIN2
MEI4
SLC25A19
PUM2
DMPK
SMAD3
SHCBP1L
FBXO34
BATF
ZNF746
RTEL1
SLC16A3
ASPG
SEC14L5
SKA1
MOB2
RGS19
OPRL1
PKM
PCTP
ARHGEF16
RHOF
LARP1
PKIB
ZNF799
FAM169B
WDR74
HUWE1
CYP51A1
SLC7A2
SLC29A1
TUBB2B
BHLHE40
RP1
RIN2
HSH2D
DNAJC1
HERC5
ZBTB7A
RALA
MXD3
PLXNB2
TP53I11
SUSD2
TJP1
ADIRF
AMOTL2
SLC11A2
SETD2
ESR1
PDCD6IP
MBD6
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TOB1
COX5A
PROP1
CDH1
CHMP5
BAG1
AGR2
STC2
FLYWCH1
DSP
SPINK4
SYT12
CYP3A43
NR2F2
ACP6
SEMA4G
ITPK1
PLA2G6
SEMA3B
ZNF576
IRGQ
DTNB
LGALS1
TARP
IL17RB
CHDH
TMPRSS2
GAS6
IER3
SMARCA2
MITF
ATP2B1
LYRM1
PRSS23
ZMYND8
MUC5B
MAP3K8
CIB3
RERG
WWP1
ABR
KIAA1217
S100A10
CSK
SLC10A3
OVOL1
UBE2I
ARID4A
C17orf77
BASP1
MAP2K7
RASEF
MLPH
RTKN
LFNG
MACIR
UNC5A
SULT1A4
SULT1A3
NBPF1
C4orf19
FSTL3
MTRNR2L6
SPATC1L
MTRNR2L2
MTRNR2L8
SP2
RGPD2
RGPD1
MTRNR2L9
MTRNR2L10
POLR3F
DZANK1
DNM2
LEMD2
RFX1
NLK
HNRNPL
LTBP1
OSBP
EVI5L
OAZ3
TOM1L2
DRC3
CIC
B3GNT6
GATAD2A
ZNF687
MAPKAPK5
PABPN1
FARSB
PCIF1
FBH1
ANKRD16
VASN
CRK
POLDIP3
FUS
ZNFX1
ANKHD1-EIF4EBP3
ANKHD1
HSP90AB1
KHSRP
MICAL3
USP17L15
UNC5B
RBBP5
ANAPC7
NUP85
LRRC26
TTC21B
TM7SF2
SIRT4
KDM4B
EXOSC5
BCKDHA
SRSF7
H4C14
TRAF7
RPS29
H2AC19
H2AC18
MEIS1
ACBD6
GTF2B
ANGEL1
DYSF
SLC25A25
NAIF1
ZBTB5
SART3
ISCU
C19orf48
ATP5MG
RAB5B
HRK
UFM1
TRIM2
B2M
PNO1
SF3B3
COG4
FBN1
IRF2BPL
UBE2L3
MYH11
GOSR2
TOMM40
PSMD12
MRPS7
GGA3
H1-4
SH2D3C
H4C3
ZNF654
CGGBP1
TSN
MAP3K11
ITGB3
H4C11
H4C12
NVL
DLL3
BLCAP
ZNF335
ZRANB2
EEF1A1
PPP2R3A
PRDX1
EIF3E
RPS27
KCTD1
SP1
KRT36
APPL2
RABL2B
CACTIN
NCOA7
STAM
H4C15
GAGE2A
TANGO6
H2AX
SKP1
NME6
EFTUD2
CCDC103
FGF18
MAF1
NDRG2
ARHGEF40
PHACTR2
SRSF2
MFSD11
H2BC12
H2AC12
NUDT4B
NUDT4
NUP214
FIBCD1
RPLP1
H2BC21
H2AC20
HSPA9
EIF1
PROSER1
NHLRC3
ZBTB4
POLR2A
BTG1
UQCRH
LRRC41
UPF2
JUND
ARRDC2
RAD23A
RAB11B
RABL2A
SESN1
TBC1D10B
MYLPF
STMN3
PI4KB
SEC61B
RPS20
RPL27
NOTCH2NLC
NOTCH2
CALM2
SRD5A1
RPS2
NSUN2
CEBPD
AP3M1
ADK
ASXL1
ACE
TMEM17
RPL28
RORC
HADHB
HADHA
RPLP0
GSTA4
JAKMIP1
IPO13
SLC35B1
PHF3
GPR108
EEF2
ASGR2
IQGAP2
EOMES
BCAT1
POLR2J3
STAM2
H2BC11
H2AC11
GFOD1
SIMC1
REXO1
GADD45B
MSH3
DHFR
STIP1
DDX39B
WIZ
PSMB3
CSRNP1
BCAR3
MAT2A
ID1
TBCK
AIMP1
H2BC5
TTC8
TRIM45
FAM53C
CDC25C
DDIT4
OXCT2
TRAF2
OPRD1
PRKACA
SMC2
HEXIM1
H2AC21
NME1
NDUFS7
LPIN1
ZC2HC1C
ACYP1
LUC7L2
FMC1-LUC7L2
FMC1
PSMD1
TMEM60
PHTF2
GPAM
VDAC2
RCC1
AK2
EIF4G2
H2BC8
H2AC8
DDX5
CEP95
CHST11
MAGOH
SUPV3L1
STRIP1
IMPDH2
TUBB4B
PIP5K1B
FBXO31
NR2C1
ADPGK
HNRNPH1
RAB7A
KCNB2
EIF4A1
LYRM4
FARS2
RPS6
EIF4E3
NAT10
CIRBP
ARMH4
RPS12
FOXO6
JAK1
NFE2L2
STK40
PMAIP1
SNX16
POLR3E
DNAJB5
FAM199X
RANBP2
FAM151B
ESYT2
EGR2
APTX
UBE2S
LY9
BRD2
PES1
PDGFD
CWF19L1
CBR3
ZC3H12B
RASSF5
DDIT3
TFPT
PRPF31
TMEM130
SSNA1
RPS4X
MAD2L2
DRAXIN
ANAPC2
OSGEP
MAP1B
JPT1
FGFR1
EMILIN2
APEX1
HSP90AA1
TMEM150A
THEM6
RPL38
PDE4DIP
LRCH4
H2BC4
H2AC6
FBXO24
CALHM6
PTK7
PIK3CD
FANK1
DNAJB4
ATOH8
SMG5
HFM1
EIF4A3
ZC3H10
TTI2
RIMBP3C
RIMBP3B
GAGE7
GAGE5
GAGE4
GAGE2B
GAGE12I
FJX1
ARHGAP45
PLAG1
CHCHD7
MNS1
PSMG2
CEP76
CCNL1
AXL
GRAMD1B
SLITRK3
ALKAL2
G3BP1
DIP2B
SNX5
MGME1
H3-3B
RASA4B
PCBP1
KCTD12
CRTAP
SHH
RPL10
NOCT
HNRNPAB
HDAC4
TUBA1C
SLC3A2
IFRD1
CIAO3
MRPL44
MISP3
TCF3
STT3A
RGS6
NXF1
MFSD4B
FAF1
ELK4
RPL29
BFSP1
ABCA5
PDE4A
FRMD6
TICAM2
DEF6
TMEM259
KSR2
RPTOR
IER5L
JUNB
H3C2
NPPC
DHRS2
UBFD1
EARS2
USP1
PATJ
IER5
SRSF5
HACD1
CHN1
OGDH
DUSP1
SH2D2A
PHF19
NTRK1
ITPR3
PACSIN2
OXSM
NGLY1
C12orf57
ARSI
PSMA7
HNRNPA1
CBX5
GIPR
DENR
THBS4
MTX3
FAM43B
CYP1A1
ARIH2
TAF12
SUDS3
STX11
TRMT61B
OTUD6B
ZMYM2
RAB20
IRF1
ZFP36L1
ZBTB40
MAGI3
IRF9
ARHGEF35
MIOS
JUN
DYNC2I1
SCML1
SNX12
PSMD9
HPD
SECISBP2
CAMLG
ZBTB18
SLC24A4
KANSL1
CLK1
ARHGEF5
ACOT6
ZC3H6
NOTCH2NLB
NOTCH2NLA
NOLC1
ICE1
MRPS23
LBH
HERPUD1
KMT2A
CWC25
VPS72
RPL35A
MYLIP
MFSD14A
IQCG
RPS23
MKRN2
BRAF
ATP6AP1L
ANKDD1A
ZZEF1
WNT5A
SAMD11
CYB5D2
SYNM
KHDRBS1
PLPP3
NUFIP1
NDUFA4
GPALPP1
BCL2A1
TMEM39A
PAK1IP1
NXT1
NAAA
MYH10
MRPS26
HOOK1
C6orf52
ARHGAP44
AMZ2
PRELID3B
NOP58
RANGAP1
MTF2
NUP62
NOP14
IL4I1
GRK4
GLS
ATF5
UBE2E2
HAX1
RPLP2
NOC4L
DDX51
TNF
NPAS4
ME3
YARS1
S100PBP
RBM20
GALK2
FLT3
COPS2
ATP5MC3
SUCLG1
XRCC2
TUT1
SLC7A5
RUBCNL
RPL23A
RIPK1
MIER2
IL21R
EHD1
DISC1
DDX19A
ANKRD54
TOM1
MFAP3L
STK11
SSBP1
SLC20A1
RPS13
RPL41
TRMO
RBM26
RASSF1
HPS5
GTF2H1
HSF4
THOC3
RSL1D1
NR1H3
LDHA
KAT6B
HIBADH
CSKMT
CKS2
C11orf98
ACP2
TPMT
KDM1B
COX7A2L
CCDC91
SDCBP2
RPL10A
ITPR1
DNAJA3
SLC19A2
RABGGTB
JPT2
ERICH5
ASCL2
XXYLT1
PPP4R3A
HDGF
EPCAM
CENPM
ATF3
SV2C
SRGN
PDGFRA
NRCAM
FSCN1
C16orf91
MRPS14
ACOT4
ZNF143
ZFYVE21
XRCC3
SPATA9
SIRT6
RHOBTB3
PTBP1
ID2
HNRNPUL1
ANKRD24
XPC
SMYD2
PCNA
NECAB3
MRPL24
LSM3
H2AZ2
FARP2
CAPRIN1
BLOC1S4
YTHDC1
TMSB15A
RUNX1
XPNPEP1
SYT17
CHD1L
ABCB10
ZC3HAV1L
SPSB4
PCSK6
EFCC1
CFAP92
TPBGL
SOCS3
SCD5
ILF3
GALNT11
DOCK8
TCEAL2
HDGFL2
C1orf21
ATF1
UBE2R2
TLN1
SRSF12
SLC40A1
SLC35D1
PRMT5
PPP1R10
MRPS18B
KIAA0319
JOSD1
GPR27
GLUD2
DNAH14
DDX21
CREB3
CCT8
TM2D3
RPS9
RPL3
PRKAA2
NEURL1B
H4C4
ETV3
DOCK10
DCUN1D4
DCP1A
BHLHB9
WTAP
USP33
SOD2
PLPPR5
NWD2
MAK16
GTF2A1
CRELD1
STOX1
SAR1B
RMND1
MRPL11
MMACHC
CHGB
CCZ1B
ARMT1
ANKRD39
TUBGCP5
SLC16A14
OLFML2B
KCNAB2
ITGAL
GFM2
EPB41
EIF3K
C22orf39
C16orf74
TXNRD1
SLFN13
SEPTIN7
MRPS25
KCNS3
INO80B
COX5B
RRM1
RC3H1
PUM1
LYPLA1
GALNT18
CLTA
CDV3
BTF3
SPIDR
SMIM10L2B
SLC25A27
NR2C2
INTS6
CYP39A1
TSPAN5
TMCC3
STOML2
SRSF1
PDXDC1
NFATC2IP
MYL6B
CLVS2
C1QBP