ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116425 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◣ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ HDAC6: STRING

WDR74
MTRNR2L8
MTRNR2L2
MICAL3
SCML1
DYSF
RGPD2
RGPD1
ACBD6
FIBCD1
HSP90AB1
MNS1
H2BC12
H2AC12
PHACTR2
MEIS1
ESYT2
FAM53C
CDC25C
SESN1
H4C11
TTI2
TUBA1A
TRIM2
POLDIP3
LRRC26
SHH
ITPR3
ADARB1
ASCL2
DISC1
H3C2
H4C12
IER5L
PHF19
GREB1
CASP7
PDZK1
FKBP4
ADAMTSL5
RNF223
RPS6KL1
OVOL2
TFF1
TPD52L1
CYP1B1
CHPT1
CCDC88C
TIPARP
MCF2L
AMZ1
SLC25A24
AKAP1
MANEAL
NFKBIA
NAB2
TMEM229B
PLEKHH1
LY6E
C1QTNF6
USP31
FOXK1
ZNF185
UPF1
CABLES2
LAMC1
SPTBN4
BLVRB
DOK7
TTC39A
RGS10
KEAP1
TFAP2C
LYPD6B
AFF1
VPS26C
CRKL
FBP1
CST6
CCN5
DMRT2
RAB40C
TBX2
KIF21A
SEPTIN9
UNKL
DECR1
SLC25A36
CBWD5
CBWD3
C1orf162
FMN1
VWA2
SLC25A42
CXXC5
CBWD6
ZBTB37
BRI3BP
MICOS10-NBL1
MICOS10
TTC6
FOXA1
DNPEP
SNAI1
COLEC12
CLASP2
UGT2B15
TCIRG1
SERPINA1
ANXA9
RCOR3
LATS1
ACACB
FUT4
TPD52L2
YPEL2
SYNE3
TMED8
ANKRD2
ACIN1
GPSM1
IKBKG
DSN1
EHF
VEPH1
ZNF346
MYZAP
GCOM1
TLE1
NIPSNAP2
CCNP
TP53I3
NT5DC3
PNKD
PRUNE1
MINDY1
CFAP206
PERP
SLC25A19
HSPB8
LRRC58
PRSS27
CAP2
ARID5B
LOC102723996
ICOSLG
MTRNR2L9
WNT16
LONRF2
PGLYRP2
NPEPPS
ZFYVE28
CFAP99
MCRIP2
MTRNR2L10
SLC1A5
TTC39C
POLR3F
DZANK1
SYT12
SHANK2
RNF144A
KCTD11
TST
PCYT1A
RTEL1
CYP4F11
ARHGEF16
GRAMD1A
IL20
ROBO3
HK1
RPS6KA2
OBSL1
INHA
CASKIN2
SLC45A4
FGFBP2
TNS1
DMPK
LTBP1
FRMD5
CCDC200
CDH18
EXT2
TBXA2R
MTRNR2L6
SLC29A1
SLC10A3
OAZ3
RALGPS2
DLC1
NAIP
SNX10
FADD
BCL3
HOMER2
PRSS22
FNIP2
KLRF2
B3GNT6
ITGB2
SSTR2
ZNF552
MEF2A
ASPG
ARFGEF2
SHCBP1L
FARSB
ZNF746
BHLHE40
ESR1
VASN
MAPKAPK5
TPBG
ZNF385B
AMOTL2
PTMA
PAQR5
STC2
HUWE1
FUS
PTP4A2
ZNFX1
PDCD6IP
ABCA3
SETD2
RBBP5
BATF
ANAPC7
NUP85
TM7SF2
SIRT4
SLC16A3
EXOSC5
BCKDHA
SRSF7
CACNA1H
H4C14
TRAF7
H2AC19
H2AC18
CSK
SLC19A1
GTF2B
ZBTB5
UBE2I
RHOBTB1
SART3
ISCU
C19orf48
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HRK
UFM1
B2M
PNO1
SF3B3
COG4
SEMA3B
FBN1
IRF2BPL
MYH11
HSH2D
ZNF576
IRGQ
GOSR2
PSMD12
PKIB
MRPS7
GGA3
H1-4
SH2D3C
DCLK1
H4C3
TSN
SLC11A2
SEMA4G
PCTP
NVL
DLL3
BLCAP
ZNF335
ZRANB2
ITPK1
EEF1A1
CUEDC1
PRDX1
SMAD3
PAX9
EIF3E
RPS27
RP1
PROP1
KRT36
NR0B2
SH3BGR
LCA5L
SLC27A2
RABL2B
FBXO34
CACTIN
STAM
H4C15
LARP1
SULT1A4
SULT1A3
SKP1
NME6
EFTUD2
CCDC103
C4orf19
PKM
SRSF2
MFSD11
ITGB3
ANGEL1
NUP214
ARRB1
ZBTB7A
SEC14L5
RPLP1
H2BC21
H2AC20
HSPA9
ZBTB4
POLR2A
BTG1
UPF2
JUND
ARRDC2
SLC7A2
RAD23A
RABL2A
MACIR
STMN3
PI4KB
FAM3C
SEC61B
RPS20
IL17RB
CHDH
H2AX
KCTD1
TOB1
RPL27
CALM2
SRD5A1
RPS2
NSUN2
CEBPD
OVOL1
AP3M1
ADK
CDH1
ASXL1
ACE
TMEM17
RPL28
RORC
HADHB
HADHA
CYP3A43
RPLP0
P2RX7
JAKMIP1
NCOA7
IPO13
SLC35B1
ERG
EEF2
ASGR2
IQGAP2
BCAT1
STAM2
H2BC11
H2AC11
REXO1
GADD45B
DDX39B
PSMB3
BCAR3
ID1
FGF18
TBCK
MVB12B
AIMP1
H2BC5
TTC8
MLPH
DDIT4
OXCT2
SMC2
HEXIM1
H2AC21
NME1
NDUFS7
ZC2HC1C
ACYP1
PSMD1
ZNF823
PKD2L2
VDAC2
RCC1
EIF4G2
IER3
H2BC8
H2AC8
RPS29
DDX5
CEP95
CHST11
MAGOH
COX5A
SUPV3L1
IMPDH2
TUBB4B
MEI4
PUM2
NR2C1
HNRNPH1
EIF4A1
LYRM4
FARS2
RPS6
NAT10
CIRBP
RPS12
FOXO6
BASP1
PMAIP1
EOMES
SPATC1L
SNX16
POLR3E
RANBP2
EGR2
EIF1
APTX
LY9
BRD2
PES1
CWF19L1
RASSF5
DDIT3
TFPT
PRPF31
TMEM130
SSNA1
RPS4X
MAD2L2
DRAXIN
ANAPC2
SKA1
OSGEP
MOB2
MAP1B
JPT1
EMILIN2
APEX1
RGS19
OPRL1
HSP90AA1
GFOD1
THEM6
RPL38
PROSER1
NHLRC3
H2BC4
H2AC6
RHOF
PTK7
PIK3CD
DNAJB4
ATOH8
EIF4A3
ZC3H10
S100A10
ARHGAP45
SP2
CSRNP1
MAT2A
PSMG2
NBPF1
CEP76
CCNL1
SLITRK3
ALKAL2
SNX5
MGME1
H3-3B
PCBP1
ZNF799
RPL10
MAP2K7
FAM169B
TUBA1C
SLC3A2
IFRD1
MRPL44
MISP3
LUC7L2
FMC1-LUC7L2
FMC1
CYP51A1
NXF1
MFSD4B
RPL29
BFSP1
PDE4A
DEF6
TMEM259
KSR2
RPTOR
TUBB2B
JUNB
NPPC
DHRS2
USP1
RIN2
IER5
SRSF5
DNAJC1
SH2D2A
NTRK1
C12orf57
ARSI
HNRNPA1
HERC5
CBX5
RALA
MXD3
GIPR
DENR
THBS4
MTX3
FAM43B
CYP1A1
TP53I11
TAF12
SUSD2
SUDS3
STX11
PLXNB2
TRMT61B
RAB20
IRF1
ZFP36L1
ZBTB40
IRF9
ARMH4
JUN
TJP1
ADIRF
PSMD9
HPD
CAMLG
SLC24A4
CLK1
ACOT6
NOLC1
ICE1
MRPS23
MBD6
LBH
HERPUD1
CWC25
VPS72
RPL35A
MYLIP
IQCG
RPS23
RAB7A
ATP6AP1L
ANKDD1A
ZZEF1
WNT5A
CYB5D2
CHMP5
BAG1
AGR2
SYNM
FLYWCH1
DSP
SPINK4
NUFIP1
NDUFA4
GPALPP1
BCL2A1
TMEM39A
PAK1IP1
NR2F2
NAAA
MRPS26
C6orf52
ARHGAP44
AMZ2
NOP58
RANGAP1
MTF2
NUP62
IL4I1
ATF5
ACP6
HAX1
RPLP2
NOC4L
DDX51
TNF
NPAS4
YARS1
S100PBP
RIMBP3C
RIMBP3B
RBM20
GALK2
FLT3
COPS2
ATP5MC3
SUCLG1
TUT1
PLA2G6
SLC7A5
RUBCNL
RPL23A
RIPK1
IL21R
EHD1
DDX19A
SSBP1
SLC20A1
RPS13
RPL41
TRMO
RASSF1
HPS5
GTF2H1
HSF4
DTNB
RSL1D1
NR1H3
LGALS1
LDHA
HIBADH
CSKMT
CKS2
C11orf98
ACP2
COX7A2L
CCDC91
TARP
SDCBP2
RPL10A
ITPR1
DNAJA3
SLC19A2
RABGGTB
ERICH5
XXYLT1
PPP4R3A
EPCAM
CENPM
ATF3
TMPRSS2
SV2C
SRGN
PDGFRA
NRCAM
FSCN1
C16orf91
MRPS14
GRAMD1B
ACOT4
SPATA9
SIRT6
RHOBTB3
PTBP1
ID2
HNRNPUL1
ANKRD24
XPC
PCNA
NECAB3
MRPL24
LSM3
CAPRIN1
YTHDC1
STK40
RUNX1
OPRD1
GAS6
SYT17
SPSB4
KCNB2
EFCC1
CFAP92
SOCS3
SCD5
ILF3
DOCK8
SMARCA2
C1orf21
SRSF12
PRMT5
PPP1R10
MRPS18B
GPR27
EIF4E3
DDX21
CCT8
RPS9
RPL3
NEURL1B
MITF
H4C4
FAM151B
DOCK10
DCP1A
NWD2
MAK16
GTF2A1
ATP2B1
STOX1
SAR1B
RMND1
MRPL11
MMACHC
ARMT1
TUBGCP5
SLC16A14
OLFML2B
LYRM1
KCNAB2
ITGAL
GFM2
EIF3K
TXNRD1
SLFN13
SEPTIN7
PRSS23
MRPS25
INO80B
FJX1
COX5B
ZMYND8
RRM1
OXSM
NGLY1
MUC5B
GALNT18
CDV3
BTF3
SLC25A27
INTS6
CYP39A1
TSPAN5
STOML2
SRSF1
MYL6B
MAP3K8
CIB3
ZNF106
RERG
OCIAD1
NDUFB5
MRPL47
DDAH1
CXXC1
CALM1
TMOD2
TFRC
RORB
LYSMD2
ASXL2
WWP1
TNFSF14
SPINT1
METTL16
CSTF1
AURKA
SLC9A1
RPL21
RPL12
LRSAM1
GABPA
CEBPB
ATP5PF
TBXT
SUSD5
NUTM1
NOP10
ABR
TSSC4
ST8SIA5
RAB6A
PTPRG
PTH2
PCDHGC3
NPW
EIF3J
THADA
SCAF11
PIP5K1B
ORMDL3
LY96
LAX1
KIAA1217
KCTD12
HNRNPA3
FBXW9
CHPF2
UBE2S
RPS27A
RBM3
HMGN4
ENO1
DPP9
CLHC1
ANAPC10
ABCE1
SMG5
SFPQ
RPS15
RGPD8
RGPD5
PPIL4
MEF2C
KMT2D
KCNMA1
SVIL
SHISA5
RPL9
RPL15
PPM1N
NOTCH2NLC
NOTCH2
NKIRAS1
LRRFIP2
LONP1
LIAS
FGFR1
CATSPERD
SLCO4A1
PAFAH2
NAA16
MTRF1
MRPL30
MRC2
MITD1
ICA1
HHAT
GAD1
FAM241A
CCNT1
C2orf42
TEX15
MRRF
TSPYL2
NOB1
NABP1
HACD1
DNAJC16
AIM2
VTA1
TMEM101
SUPT5H
NUP54
NMBR
MATK
KRR1
FBXO31
EDARADD
DDI2
CD24
ABTB2
METTL3
H3C1
ATP13A1
ZNF132
UBC
RHBDD1
LCMT2
GUCA2A
EEF1AKMT2
DZIP1
CHD8
ASB8
ADAL
ZNF207
SERP1
RFFL
HNRNPAB
HNRNPA2B1
EIF2A
CBX3
SNX1
SNRPE
RBMX
ARID4A
MRFAP1
IL15RA
GPN2
DIP2B
DDX3X
C17orf77
SPIRE2
SAMD4B
PNP
EHD4
CALHM6
VASP
SH2D1A
RPL22L1
RGL4
PSMA7
H4-16
CCAR2
CASP8
BORCS5
APOBR
WDPCP
STT3A
MSL2
MDH1
FRMD6
CDK12
C1orf53
ZNF764
RASEF
PWP2
MTHFD2
MPPE1
MORC3
LOC102724159
CD74
C8orf37
B3GAT3
SRSF3
SMIM12
SERBP1
RPL14
NASP
MRPL55
ITPRIP
IL23R
GAS1
CRADD
ATP5MC2
TRMT2A
RSL24D1
RANBP1
NECAP1
H1-2
WDR4
HSD17B12
ERO1B
CCDC107
ATG5
ACOT1
TRAFD1
RTKN
QTRT2
PRPF19
PATJ
LFNG
KANK1
EPRS1
DLG4
CCDC191
ALG1
UNC5C
UBFD1
TCTA
SF3A3
RHOA
PPP1R8
POLA2
P2RY1
LRP11
EARS2
CITED2
CCL28
CALR
BTRC
ZNF3
TXN2
SFRP5
RETSAT
PKNOX1
ELMOD3
CCDC170
STXBP6
SPHK2