ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5090184 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◣ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

MTRNR2L2
MTRNR2L8
WDR74
MYH11
DLL3
FBN1
LRRC26
KCTD1
TUBA1A
TRIM2
CEBPD
MTRNR2L9
TMEM17
JAKMIP1
BCAT1
FGF18
NR2C1
EOMES
SNX16
HRK
ACE
SRSF7
EGR2
RASSF5
TMEM130
MAD2L2
DRAXIN
JPT1
PTK7
ATOH8
EIF4A3
FUS
ARHGAP45
MICAL3
SLITRK3
ALKAL2
RPS2
MISP3
RGPD2
RGPD1
BFSP1
KSR2
SIRT4
TRAF7
NPPC
ZBTB4
POLR2A
ARSI
DYSF
ITGB3
FAM43B
RAB20
ARMH4
MAPKAPK5
RPLP0
SLC24A4
ACOT6
MYLIP
ANKDD1A
WNT5A
OXCT2
SYNM
MRPS26
ARHGAP44
HEXIM1
SLC27A2
H4C14
RBM20
FLT3
THEM6
RUBCNL
RIPK1
CHST11
SLC20A1
RASSF1
MACIR
HSF4
CSKMT
C11orf98
EEF2
POLR3F
DZANK1
ERICH5
IMPDH2
XXYLT1
EPCAM
SV2C
PDGFRA
NRCAM
FSCN1
ADARB1
POLDIP3
GRAMD1B
ACOT4
SPATA9
RHOBTB3
TSN
OPRD1
SYT17
BTG1
KCNB2
EFCC1
CFAP92
SOCS3
SCD5
DOCK8
CIRBP
C1orf21
RPLP1
EIF4E3
PIK3CD
SRSF12
GPR27
FAM151B
MAP1B
RPS9
RPL3
NEURL1B
DOCK10
RPS12
NWD2
GTF2A1
CACTIN
PDE4A
STOX1
TUBGCP5
SLC16A14
OLFML2B
H4C12
MAT2A
FJX1
GALNT18
SLC25A27
INTS6
CYP39A1
RPS27
TSPAN5
DDAH1
CALM1
TMOD2
TFRC
RORB
LYSMD2
AMZ1
EMILIN2
SPINT1
H2AX
SLC9A1
CEBPB
TBXT
SUSD5
MEIS1
ST8SIA5
PTPRG
PTH2
PCDHGC3
NPW
GADD45B
BCAR3
PIP5K1B
KCTD12
IQGAP2
UBE2S
MEF2C
KCNMA1
NOTCH2NLC
NOTCH2
FGFR1
SVIL
PPM1N
SLCO4A1
MRC2
ICA1
HHAT
GAD1
GFOD1
TEX15
HACD1
MATK
EDARADD
CD24
ABTB2
DDIT3
TUBA1C
UBC
LCMT2
EEF1AKMT2
DZIP1
ADAL
HNRNPA2B1
CBX3
ARRDC2
IL15RA
DDX3X
HSP90AB1
NBPF1
RPL38
CALHM6
PSMA7
H4-16
FRMD6
HSP90AA1
MPPE1
CD74
REXO1
EIF4A1
SRSF3
GAS1
H1-2
ERO1B
ACOT1
H2AC19
H2AC18
KANK1
NXF1
UNC5C
P2RY1
LRP11
CCL28
CALR
HNRNPH1
RPS4X
SFRP5
H3-3B
PFKFB3
MMP28
KLHL35
CDCA7L
ACOT2
PRDX1
RPS20
PROS1
JAK1
PDGFD
RASL10A
NRARP
RPS6
TFCP2L1
SRSF6
ZBTB37
GTF2B
CHN1
THOC3
SPTAN1
RASGRF1
PDE4C
H2BC4
H2AC6
JUNB
RPS26
SPATC1L
UBB
SHISA3
LRRFIP1
SKP1
RASD1
PTPN5
EIF4A2
ZCWPW1
SEMA6A
PHLDA3
MEPCE
KCTD15
KCNA6
HMGA1
LTBP1
RPS3
NTRK2
BIN1
AMOTL2
NME6
EIF1
DNAJB4
HFM1
GOLGA5
DAB1
H4C11
DUSP1
PLPP3
DGAT1
TMEM229B
PLEKHH1
H4C15
GLS
B2M
QDPR
DIPK1C
RABL2B
RIMBP3C
RIMBP3B
KDM4A
H1-4
H2BC8
H2AC8
NAAA
KIAA1549L
GLB1L3
H2BC5
ZNF720
DNAJC25-GNG10
DNAJC25
CYP24A1
CLASP2
CBR3
RIOX1
ATF4
ADRB2
TMEM259
SIX1
ARHGAP42
RGS6
TRMO
ZNF277
DOCK4
PHACTR2
SMTNL2
CAMK2N2
RPL41
RPL7A
MED22
C19orf48
H2BC21
H2AC20
C12orf57
LAP3
H1-10
DLX1
APTX
LBH
TMSB4X
DNAJA1
EIF4G2
GNB4
SIX5
CSRNP2
POLR3D
GJA3
FZD2
FGFBP3
ENDOD1
FAM53C
CDC25C
TMSB10
RNF207
RNF125
GCNT4
H4C3
TNFRSF1B
MT3
MIIP
CCNL1
PAH
OAF
ELOVL7
ASCL1
CALM2
SLC3A2
INPP1
SH3RF3
POR
LSR
HOXA7
SFRP4
PLXND1
HLA-DQA1
IER5
VAMP1
TPCN1
POLR2J
IQCD
GPX1
CBWD5
LDHA
ZNF853
NSMCE4A
KIAA1614
GPR157
TPBGL
FTL
AADAT
HEXB
RPL13A
PRRG4
RPL32
ENOX1
SLC43A1
LENG9
BMP2
HIBADH
RPS27L
GDF1
CERS1
ZC3HAV1L
ADRB3
RPL28
SLC27A3
NXPH3
IRF8
H2AC21
SPSB4
HR
IER5L
CLIC6
SRSF5
RHOB
H4C2
RELT
CLTA
GREB1
CASP7
PDZK1
FKBP4
ADAMTSL5
RNF223
RPS6KL1
OVOL2
TFF1
TPD52L1
CYP1B1
CHPT1
CCDC88C
TIPARP
SLC25A24
MCF2L
AKAP1
MANEAL
NFKBIA
NAB2
LY6E
C1QTNF6
USP31
FOXK1
ZNF185
UPF1
CABLES2
LAMC1
SPTBN4
BLVRB
DOK7
TTC39A
RGS10
KEAP1
TFAP2C
LYPD6B
AFF1
VPS26C
CRKL
FBP1
CST6
CCN5
RAB40C
DMRT2
TBX2
SEPTIN9
KIF21A
UNKL
DECR1
SLC25A36
SLC25A42
CBWD3
C1orf162
FMN1
VWA2
CXXC5
CBWD6
BRI3BP
MICOS10-NBL1
MICOS10
TTC6
FOXA1
DNPEP
SNAI1
COLEC12
UGT2B15
TCIRG1
SERPINA1
ANXA9
RCOR3
LATS1
ACACB
FUT4
TPD52L2
YPEL2
TMED8
SYNE3
ANKRD2
ACIN1
GPSM1
IKBKG
DSN1
SP2
EHF
VEPH1
ZNF346
MYZAP
GCOM1
TLE1
NIPSNAP2
CCNP
NT5DC3
TP53I3
PNKD
PRUNE1
MINDY1
CFAP206
PERP
SLC25A19
HSPB8
LRRC58
PRSS27
CAP2
ARID5B
LOC102723996
ICOSLG
WNT16
LONRF2
PGLYRP2
NPEPPS
ZFYVE28
CFAP99
MCRIP2
SHANK2
MTRNR2L10
SLC1A5
TTC39C
SYT12
CCDC200
RNF144A
KCTD11
DNM2
TST
PCYT1A
RTEL1
CYP4F11
ARHGEF16
HK1
GRAMD1A
IL20
LEMD2
ROBO3
RPS6KA2
RFX1
OBSL1
INHA
CASKIN2
SLC45A4
NLK
HNRNPL
FGFBP2
TNS1
DMPK
OSBP
FRMD5
CDH18
EXT2
TBXA2R
EVI5L
RALGPS2
MTRNR2L6
SLC29A1
SLC10A3
OAZ3
DLC1
NAIP
SNX10
FADD
BCL3
TOM1L2
DRC3
HOMER2
PRSS22
ARFGEF2
FNIP2
KLRF2
CIC
B3GNT6
GATAD2A
ITGB2
SSTR2
ZNF687
ZNF552
MEF2A
PABPN1
ASPG
SHCBP1L
FARSB
ZNF746
BHLHE40
PCIF1
FBH1
ESR1
ANKRD16
VASN
TPBG
CRK
ZNF385B
PTP4A2
PTMA
SETD2
PAQR5
STC2
HUWE1
ABCA3
ZNFX1
PDCD6IP
ANKHD1-EIF4EBP3
ANKHD1
KHSRP
USP17L15
UNC5B
RBBP5
BATF
PKIB
ANAPC7
NUP85
TTC21B
TM7SF2
SLC16A3
KDM4B
EXOSC5
BCKDHA
CACNA1H
RPS29
CSK
SH3BGR
LCA5L
SLC19A1
ACBD6
ANGEL1
SLC25A25
NAIF1
ZBTB5
SMAD3
UBE2I
RHOBTB1
SART3
ISCU
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RAB5B
UFM1
PNO1
SF3B3
COG4
SEMA3B
IRF2BPL
UBE2L3
HSH2D
ZNF576
IRGQ
GOSR2
TOMM40
PSMD12
MRPS7
GGA3
SH2D3C
DCLK1
ZNF654
CGGBP1
MAP3K11
SLC11A2
SEMA4G
PCTP
NVL
BLCAP
ZNF335
ZRANB2
ITPK1
EEF1A1
CUEDC1
PPP2R3A
PAX9
EIF3E
SP1
RP1
PROP1
KRT36
NR0B2
IL17RB
CHDH
APPL2
SLC7A2
FBXO34
NCOA7
STAM
GAGE2A
TANGO6
LARP1
SULT1A4
SULT1A3
TOB1
EFTUD2
CCDC103
C4orf19
MAF1
NDRG2
ARHGEF40
PKM
SRSF2
MFSD11
H2BC12
H2AC12
NUDT4B
NUDT4
NUP214
FIBCD1
ARRB1
ZBTB7A
SEC14L5
HSPA9
PROSER1
NHLRC3
UQCRH
LRRC41
UPF2
JUND
RAD23A
RAB11B
RABL2A
SESN1
TBC1D10B
MYLPF
STMN3
PI4KB
FAM3C
SEC61B
RPL27
SRD5A1
NSUN2
OVOL1
AP3M1
ADK
CDH1
ASXL1
RORC
HADHB
HADHA
CYP3A43
P2RX7
PLXNB2
GSTA4
IPO13
SLC35B1
PHF3
GPR108
ERG
ASGR2
POLR2J3
STAM2
H2BC11
H2AC11
SIMC1
MSH3
DHFR
STIP1
S100A10
DDX39B
WIZ
PSMB3
CSRNP1
ID1
TBCK
MVB12B
AIMP1
TTC8
TRIM45
MLPH
DDIT4
TRAF2
PRKACA
SMC2
DTNB
NME1
NDUFS7
LPIN1
ZC2HC1C
ACYP1
LUC7L2
FMC1-LUC7L2
FMC1
PSMD1
ZNF823
TJP1
PKD2L2
TMEM60
PHTF2
GPAM
VDAC2
RCC1
AK2
IER3
DDX5
CEP95
MAGOH
COX5A
SUPV3L1
STRIP1
TUBB4B
TP53I11
MEI4
FBXO31
PUM2
ADPGK
RAB7A
LYRM4
FARS2
NAT10
FOXO6
BASP1
NFE2L2
STK40
PMAIP1
POLR3E
DNAJB5
FAM199X
RANBP2
ESYT2
LY9
BRD2
PES1
CWF19L1
ZC3H12B
TFPT
PRPF31
SSNA1
ANAPC2
SKA1
OSGEP
MOB2
APEX1
RGS19
PRSS23
OPRL1
TMEM150A
PDE4DIP
LRCH4
FBXO24
RHOF
FANK1
SMG5
ZC3H10
TTI2
GAGE7
GAGE5
GAGE4
GAGE2B
GAGE12I
PLAG1
CHCHD7
MNS1
PSMG2
CEP76
AXL
UNC5A
G3BP1
DIP2B
SNX5
MGME1
RASA4B
PCBP1
CRTAP
ZNF799
SHH
RPL10
NOCT
MAP2K7
HNRNPAB
HDAC4
FAM169B
IFRD1
CIAO3
MRPL44
TCF3
STT3A
CYP51A1
MFSD4B
FAF1
ELK4
RPL29
ABCA5
TICAM2
DEF6
RPTOR
TUBB2B
H3C2
DHRS2
UBFD1
EARS2
USP1
RIN2
PATJ
DNAJC1
OGDH
SH2D2A
PHF19
NTRK1
ITPR3
PACSIN2
OXSM
NGLY1
HNRNPA1
HERC5
CBX5
RALA
MXD3
GIPR
DENR
THBS4
MTX3
CYP1A1
ARIH2
TAF12
SUSD2
SUDS3
STX11
TRMT61B
OTUD6B
ZMYM2
IRF1
ZFP36L1
ZBTB40
MAGI3
IRF9
ARHGEF35
MIOS
JUN
DYNC2I1
SCML1
ADIRF
SNX12
PSMD9
HPD
SECISBP2
CAMLG
ZBTB18
KANSL1
CLK1
ARHGEF5
ZC3H6
NOTCH2NLB
NOTCH2NLA
NOLC1
ICE1
MRPS23
MBD6
HERPUD1
KMT2A
CWC25
VPS72
RPL35A
MFSD14A
IQCG
RPS23
MKRN2
BRAF
ATP6AP1L
ZZEF1
SAMD11
CYB5D2
CHMP5
BAG1
AGR2
KHDRBS1
FLYWCH1
DSP
SPINK4
NUFIP1
NDUFA4
GPALPP1
BCL2A1
TMEM39A
PAK1IP1
NXT1
NR2F2
MYH10
HOOK1
C6orf52
AMZ2
PRELID3B
NOP58
RANGAP1
MTF2
NUP62
NOP14
IL4I1
GRK4
ATF5
ACP6
UBE2E2
HAX1
RPLP2
NOC4L
DDX51