ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026267 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◣ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PHF12
CSTF1
AURKA
SLCO2B1
MIA2
SLC7A7
PAOX
BTNL8
SELENOP
HNF1A
PKP4
RPS7
KIF21A
VIL1
PCYT2
PLEKHG6
ADAP1
RPS3A
ACY3
SHISA5
CACNB2
STARD4
APOC3
AHCY
WDR36
TATDN3
NSL1
ACOX2
IGSF23
ACOT7
ADGRG7
MVP
SLC51B
SEH1L
ZNF567
DENND2B
F7
PANK1
MRPL44
STX16
CDK5RAP1
LBX2
RBKS
BABAM2
LOC100129484
ORC2
HAAO
JMJD1C
SDHAF1
EIF6
PINK1
CREB3L3
VAMP5
AMACR
POLDIP3
DIP2C-AS1
KNL1
VTN
NEK2
ZNF214
NLRP14
TANK
C11orf49
EHBP1
GSDMB
SCAF11
ANKRD40CL
F10
WDR74
BRCA1
TCEA2
ABLIM1
ACY1
PLEC
TACO1
CWC25
CLPB
TMBIM1
MYADM
LGALS2
MGST2
MCRIP1
RAB17
BORCS7
ZNF827
APOB
PARD3B
SH3D19
MMADHC
CYP17A1
PHF14
SUCLA2
SLC45A4
TNFAIP1
IFT20
APOA1
NDUFS1
EEF1B2
HGD
LSM14A
SELENOI
ADGRF3
COX16
LRRC29
PLXNB2
KMT2D
PRAP1
EIF1AD
BANF1
SSTR1
AP2S1
ZNF529
TMEM181
GNAL
BLOC1S5
NUDT13
DHRS3
RBM42
PABPN1
RAB37
MRPL16
CCDC90B
PPIP5K2
CDC14B
CCDC107
MYL12B
TECR
DNAJB1
IYD
U2SURP
MRPL48
MGAT1
CPHXL
KMT5A
SMG5
SIAE
SPATA2
CAMSAP3
STK24
CNOT2
NDUFS7
TRIP4
MAPKAPK5
TMEM115
RBBP5
NPAS4
IQANK1
FAM83H
PEPD
STARD7
SMAGP
CCR6
ST3GAL6
CISD1
ANK3
IFTAP
GSTK1
SKIV2L
NELFE
TJP3
AJUBA
ZNF564
RGL1
ARPC5
AHSG
EHHADH
DDX23
TMPRSS4
ESRRA
SMG8
CLIC1
MBNL2
TBCCD1
CCDC146
IFNGR1
DECR2
CTSB
NDUFS3
KBTBD4
VPS54
AQP11
DNASE1
IST1
PAK4
APOA2
SPATS2L
TMEM254
METTL7B
SMARCD2
BOD1
ZNF165
TMEM92
RBM33
TUT1
GTF3C3
PRR5
B4GALT4
WDR24
OPA3
PTK2B
CRNKL1
CFAP61
NR1D1
TNFRSF10B
NUF2
ZNF219
PRKCSH
CCDC151
NPC1L1
NR0B2
DDC
RBM39
NOSTRIN
NCEH1
FAM149B1
ECD
BANP
INTS4
DYNC1I2
ZMAT1
ZNF487
TDP2
ACOT13
RHOBTB2
SLC23A3
TCIRG1
H4C3
FRA10AC1
DSTYK
PPIL2
MMP15
SEC16B
BMF
AAR2
GRTP1
BCL9L
SCP2
SLC10A5
GPR137
FASTKD1
APOM
USP30
C1orf174
LRP2
BCL7B
NDUFA6
ZNF747
RPL34
UBA5
PDXP
SURF4
GNG4
TAOK3
C1orf210
SEC23A
SCNM1
LYSMD1
MRPL11
CHMP4B
PRRG2
NOSIP
CSTF2T
ZNF205
SOS1
TOMM40
ACSL1
TFEC
DOK4
SMIM11B
SMIM11A
TMEM86B
KBTBD6
WNK1
HNMT
N4BP2L1
SOCS5
AATK
ZNF576
IRGQ
AGMAT
UPB1
C17orf75
NEURL2
CTSA
MAP3K11
NSUN5
AKAP1
PAFAH2
SUPV3L1
MRPL20
TMEM71
PHF20L1
PLA2G12B
ZFYVE1
COPS7B
UBA6
PPRC1
YJU2
MMACHC
CLDN4
SRC
HADHB
HADHA
PUS10
PEX13
ANXA9
OTULIN
APBB1
GAMT
MARK2
CPPED1
TMCO1
KLC4
GPR35
CLNS1A
ISY1-RAB43
ISY1
NPRL2
CYB561D2
TFPT
PRPF31
DFFA
TRMT2A
RANBP1
TMEM242
ALPI
RAB32
CREBRF
KATNB1
TMEM144
NDUFA2
IK
ANAPC5
TMEM109
KRR1
WDR46
PFDN6
MYO1A
ABCC6
TRIM15
KRT8
JRK
NIPAL1
CNGA1
GPANK1
CSNK2B
HSD17B11
TM9SF4
INHBE
ZNF223
PPP1R3D
FAM217B
PPP1R12B
UNK
COPS4
PAAF1
COA4
PEMT
FYB2
PRDM10
ARNT
DRG2
COMT
KIAA1217
SLC25A16
BMS1
HSPE1-MOB4
HSPE1
HSPD1
SLC39A5
RPS19
DENND5B
FDX1
LRSAM1
RPL12
RNPEP
CDC34
SEPSECS
MAP4K5
ATL1
MED23
RALGPS1
ZNF225
COMMD3-BMI1
COMMD3
IFRD2
HMGCS1
HNF1B
CACNA1G
EMP1
GBA
AS3MT
TECPR1
TMTC3
CEP290
DDA1
MEP1A
GFER
KCNK10
GOLT1A
MAIP1
HK1
GRWD1
ASAH1
SLC22A18
BSDC1
FAM98B
SELENOH
TIMM22
NR2F2
RFXANK
BORCS8-MEF2B
BORCS8
GDI2
CIDEC
METTL25
CCDC59
MRPL21
IGHMBP2
IGFL4
TRAF4
TOMM70
LNP1
WDPCP
MDH1
MRPL30
MITD1
ZNF232
SPHK2
RPL18
AGT
GALM
PRR3
GNL1
H4C12
MRPS16
GATB
ZFYVE27
TBC1D16
CCDC57
MTRF1
DNMT3A
EPHX2
MTRNR2L8
PEX11G
DHX35
EIF3F
PIAS1
SUGCT
MPLKIP
GSDMD
ATXN7L1
CDIP1
PALM2AKAP2
RDH5
MTIF2
ABCC9
ATP5MC3
FGFR4
NUP107
COX7C
RABGGTB
C4BPB
EDEM2
TASOR2
NFXL1
ZNF461
TSNAXIP1
RANBP10
SLC35B1
PDZK1
NCOA4
GSTO1
CFAP97D1
NID1
CEP43
SHANK2
BUB1B
AXL
RGN
TMEM101
ZNF155
CXCL2
CDC25A
AP1M1
ATXN7
ALAS1
IQGAP3
MAN2C1
BRPF3
KATNBL1
TAF11
RAB11A
BBS1
SCAF1
GFM1
RASSF9
RRP15
ERCC6L2
DLC1
NFKBIZ
HSPH1
SLC2A14
MT1F
RPL29
BIRC2
MRPL40
HIRA
NUFIP1
GPALPP1
WDR81
NUP214
CTU1
RPTOR
SOD2
METTL8
DCAF17
ACAT2
PJA2
LARP1B
PEX3
ADAT2
ZNF770
DNAJC11
ERF
FOXJ3
CDHR5
MRPS18C
HELQ
BTRC
TIMM23
LUC7L2
FMC1-LUC7L2
FMC1
ZSWIM1
NEDD8-MDP1
NEDD8
GMPR2
RTEL1
XYLB
EPS8L3
MTRNR2L2
UTP14C
PIKFYVE
HPS5
GTF2H1
ABCF2-H2BE1
ABCF2
NR2C1
MRPS15
C19orf53
FAM136A
NODAL
NOP16
HIGD2A
NDUFC2-KCTD14
NDUFC2
INTS12
GSTCD
SP2
VIPAS39
AHSA1
FUBP3
ELP3
ZNF764
BAIAP2L2
INO80B
ALG10B
SOAT2
ABCC2
PRCC
NDUFAF5
ESF1
HDHD3
GRM4
SNRPF
SYT7
CCDC77
KDM5A
TMEM139
TCOF1
RSPRY1
CD99
NME1
FUT2
TRIM46
KRTCAP2
PDE11A
CLRN3
RBM8A
RAD51AP1
C12orf4
HSP90B1
TCAIM
RPS3
TTI1
RPRD1B
GMPPA
ZNF302
POLR3F
DZANK1
ADD3
RCAN1
GBF1
FAM168A
CRK
F2
ZNF862
SLC17A5
FBXL19
ALG10
SLC25A53
COASY
ANKS4B
TSKU
SP5
DENR
SMLR1
MRPS31
C15orf39
MRPS34
EME2
SCT
GAB2
PRPF40A
AMBRA1
EMSY
RPS6KB2
UNKL
PGPEP1
COQ5
MTMR9
CSRNP1
ASXL1
CRADD
HNF4A
RPS26
USP48
TP53I3
PRR13
EPS15
RNF128
MAP1LC3B2
INTS5
KIF3B
SHF
AMN
ZSWIM3
ACOT8
KAT7
UBQLN4
LAMTOR2
NOP14
GRK4
C1orf109
QPRT
LRIG2
FAM185A
TEFM
GALK2
COPS2
SNAP47
STK31
JMJD4
MYL3
EXD2
TOR1AIP1
TMEM41A
A1CF
CENPS-CORT
CENPS
TOB2
RNF121
LOC100133315
RAB11FIP1
DMAP1
BLCAP
CCDC71
CSNK1A1
SSBP1
ARHGEF12
DPP3
ADM
STX18
ZFR
ZNF224
SSNA1
ANAPC2
PES1
MIA3
RBP5
CLSTN3
RBP2
SMG7
SLC19A2
KMT5B
SCML4
ATP5F1D
ZNF444
PWP1
RPGRIP1L
FTO
SNRPD3
GUCD1
ZNF512B
RRN3
AGPS
ZBTB45
DENND1A
SENP1
PFKM
VPS28
CYP19A1
FEM1A
SLC31A1
FKBP15
SNRPA
MRPL24
ZNF408
ARHGAP1
TMEM184A
SIRT4
DHX33
VILL
WDR90
PKIG
HAX1
GFM2
IGFL2
ISOC1
POLR2H
LEAP2
IQSEC3
MRPL3
CBS
ZNF181
IPO4
ZNF112
ZFP91
SEC22B
LPXN
M6PR
KLRG1
ARHGDIB
FNIP1
SLC7A9
YAP1
ARPIN-AP3S2
ARPIN
CFB
POLRMT
HMGB1
USPL1
LMBRD1
PROSER1
NHLRC3
ACAP3
ALG14
CCAR2
ZNF354A
NPPB
MAF
ZFAND2B
FABP1
ZNF28
BOLA1
DCP1A
TM9SF2
APOBEC1
CLDND1
GID8
DIDO1
GMNN
PATZ1
ADH6
ZNF532
SECISBP2
TTLL9
SPRY4
MRPL39
SORT1
CFLAR
C2orf49
NR1H2
TK1
AFMID
GRB7
DUSP15
TRUB1
CLYBL
CCDC93
ATF7IP
CHCHD2
SLC33A1
CCND1
TLCD2
RBSN
INTS1
CDK12
TCAF1
HYAL2
PHF7
BAP1
HDAC7
UBE4A
PCYT1B
TTC31
CCDC142
PSMB3
DDX41
PPP1R13L
SLC35A3
ZFYVE19
DNAJC17
C1GALT1
UMPS
SLC26A1
POLR1H
KANSL3
WASHC2A
MOK
MNAT1
WDR11
GARS1
CMPK1
TPT1
BAZ1B
RBM7
C11orf71
TMCO2
BNIP1
SAP18
RIC8B
CMC1
POM121
YEATS4
LPIN3
MTA1
SF3A3
KCTD7
TXNDC9
EIF5B
TRUB2
COQ4
SART1
PHB
ALKBH7
CYCS
ABT1
MANEA
VCPIP1
C8orf44-SGK3
KLHL20
TRIM14
PERP
ZBED4
TOGARAM1
KLHL28
DNAJC15
POT1
SMPD3
TIMM23B
PARG
SYT8
TAS1R1
NOL9
RSPH14
INVS
ERP44
SETX
EPN3
ZNF230
USP16
ALOXE3
SUPT7L
SLC4A1AP
CCDC141
TMPRSS13
RPL27
CYREN
DHRS11
NDUFA9
AKAP3
ZNF485
METRNL
TMEM150A
MYO1E
TREML1
STYXL1
MDH2
SCO2
PHF1
LARS1
MXI1
WNK4
FBLN1
PAQR4
ZNF235
EDRF1
CRPPA
SMYD5
TMEM199
POLDIP2
CES1
SHFL
SLC25A28
TOP3B
DCT
ATXN1L
ACO1
HINT2
KDM3A
NAGPA
ABRAXAS2
CCP110
GAB1
GAS2
SNRPB2
IDH3B
MAP3K7
ANKRD40
VPS50
HEPACAM2
AGTRAP
EPS8
UTP3
GFI1B
RAB30
NFE2
TRMT61B
MRPL19
VTA1
NMBR
ACSL5
SEMA4G
NR1H3
GGNBP2
TSSC4
DPP4
LAPTM4A
CDK11B
CDK11A
SLC35A2
PGBD4
EMC7
ATG101
FAAP20
TTI2
ZSCAN25
GDF15
BTBD19
CRYGC
SNX17
EIF2B4
PNPO
STAT3
SNAI1
GLTPD2
LEKR1
PSEN1
GC
RPS11
KIF16B
HBP1
ZBTB8OS
RBBP4
LIN54
LIN37
PDSS2
FAM200A
AQR
BOD1L1
PROS1
ASB9
GEMIN6
ATXN1
MRPL55
IL32
ZC3H12D
ARMH3
AHCYL2
WDR70
NQO2
NFE2L2
NCOA2
ELOC
CCR1
TMEM63A
IDH1
ZNF419
ENTPD8
GSK3A
UROS
BCCIP
CPSF1
GDPGP1
CIB1
ZNF226
MRPS25
CLASP1