ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748420 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX15717764: EndoC-BH1

◢ SRX15717768: EndoC-BH1

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◣ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX15717766: Hep G2

◢ SRX15717767: Hep G2

◢ SRX15717769: Hep G2

◢ SRX15717777: hESC derived endocrine progenitor cells

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX15717776: hESC derived hepatoblasts

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX15717770: hESC derived pancreatic cells

◢ SRX15717775: hESC derived pancreatic cells

◢ SRX15717778: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ SRX15717771: Pancreatic islets

◢ HNF4A: STRING

MTRNR2L2
MTRNR2L8
NDUFS1
EEF1B2
RGPD2
RGPD1
PHF12
MTRNR2L9
NEK2
PRR3
GNL1
MIA2
SKIV2L
NELFE
CCDC90B
ATXN7L1
SH3D21
WDR74
SFRP5
CCDC107
RPS3A
CDC14B
SCARB1
WDR36
CSTF1
AURKA
KNL1
LBX2
ABLIM1
DKK4
C19orf12
SF3A3
SELENOP
SMARCD2
TNFRSF10B
PPIP5K2
NQO2
MRPS28
RPL34
GAB1
SP2
IST1
ZSWIM3
ACOT8
RBBP5
NR1I3
MTRNR2L10
MMACHC
ROCK2
MVP
COPS4
CEP128
ARPIN-AP3S2
ARPIN
UBE2R2
CD2BP2
ACY1
KRTAP5-7
RFX2
SAXO1
RRAGA
RBKS
BABAM2
TTC31
FAM228B
SF3B6
RAB17
CLASP1
KDM3A
MAN2C1
NUP107
GOLGA4
CLCF1
ARNT
INTS4
SEC23A
CSNK1A1
SH3D19
MAFG
CDK5RAP1
GUCA2A
YJU2
ZC3H12D
METTL7B
MAP1LC3C
PDXP
MMADHC
RFFL
MGAT1
S100A16
FZR1
PRKCI
ATF4
ALG10B
VPS54
PEX11G
TDP2
ACOT13
PGLYRP2
CCNI
EIF1AD
BANF1
TINAGL1
PRKCSH
CCDC151
TNPO3
ALDH3A2
PSMA5
LSG1
EIF4A2
BAAT
PPP1R12B
IPO4
ZNF827
U2SURP
YAP1
RABGGTB
LDAH
SYT12
BORCS7
RPS7
POLDIP3
TIMM9
KIAA0586
KLC4
MRPL2
RPL7
RDH10
POLR1H
CYP17A1
PTS
ZNF408
ARHGAP1
RNF121
LOC100133315
B4GALT4
LAPTM4A
SCNM1
LYSMD1
SLC1A3
NUDCD1
VGLL4
P3H4
FKBP10
MRPL11
SHTN1
RAB30
USP16
MLLT10
HAAO
PAOX
PKP4
HNF1A
ZNF232
AGMAT
VIL1
NEURL2
CTSA
IQANK1
FAM83H
SCAF11
ZNF567
TATDN3
NSL1
APOB
MAP3K11
SMG5
ABCC6
KIF21A
PCYT2
AQP11
PINK1
DENND2B
SHISA5
ORC2
F10
PABPN1
CDKN2AIP
RAB37
GSDMD
VAMP5
ABCD3
HADHB
HADHA
NRL
DCAF11
AHCY
SLCO2B1
SRSF11
LRRC40
PLXNB2
ENTPD8
GAMT
ACY3
UBR4
F7
ACOX2
PLEKHG6
ZNF219
C9orf64
AHSG
XYLB
CMC1
FYB2
SUCLA2
SLC7A7
RAP1GAP
NID1
C1GALT1
MGST2
DENND5B
ATXN7
LARP1
CREB3L3
NR0B2
DOK4
PDE11A
NDUFA6
DEAF1
ZNF214
NLRP14
CBS
GDI2
ISOC1
MMP15
RAB32
IGSF23
ANKS4B
CFB
ASGR2
PANK1
SLC45A4
PPIL2
CHST13
PUS10
PEX13
SLC19A3
ANXA9
SLC2A14
CDIP1
TMEM177
EPS8L3
TCIRG1
FCHO2
RIN3
TRIM14
C3
IFNGR1
DNAJC22
AJUBA
ALKBH7
NEU4
FASTKD1
HSPE1-MOB4
HSPE1
HSPD1
IL32
ATP7B
ALG11
STARD7
MCRIP1
HMGCS1
UGDH
GNG4
ZNF184
GIPC2
SDCBP2
PERP
CPPED1
CYB5R3
IL11RA
SLC35D1
ETFA
TM4SF5
TRIM15
IL7
FNIP1
PEPD
PDLIM2
HNMT
SEPTIN9
TMBIM1
SARDH
PALM2AKAP2
DHRS3
SMLR1
MRPL20
CXCL17
PAAF1
COA4
AGT
STAT5B
ZNF764
MPND
APOA1
GPT
EIF6
DNMT3A
IQGAP2
AKAP1
VEGFA
MOV10L1
DONSON
SLC28A1
PTPA
CRAT
LOC100129484
MAF
UBA6
NGEF
HSD17B11
TFR2
FGFR4
UHRF1BP1L
ABAT
CSRNP1
HGD
PROZ
LCAT
SNTG1
RBIS
H4C3
OCIAD2
TRAF4
MSH5
TMEM254
TK1
AFMID
MFN2
EPHX2
CRK
CBY3
SLC36A1
ERF
PRAP1
INHBE
IYD
SPPL2A
LINS1
ASB7
PKLR
CLDN19
AMACR
PHACTR4
ASPDH
MST1
CCDC142
NR1D1
CAMSAP3
SEC16B
SH3BGRL2
C11orf24
VANGL1
BLOC1S5
ANK3
KRT8
QPRT
MYADM
APOC3
NIPSNAP1
IDH1
EPS8L2
ZNF512B
SOD2
GRTP1
PAK4
N4BP2L1
SERPINF1
POLR2H
ACO1
VTA1
NMBR
F12
ZBTB4
POLR2A
SOS1
MYL12B
TAOK3
HRCT1
ZFAND2B
PGPEP1
SLC22A3
TPRN
GPR35
NUP210
ADGRG7
INTS9
HMBOX1
GCHFR
TRMT2A
RANBP1
GALK1
RBMS1
RCAN1
ADD3
SF3B2
MIA3
TNS3
MLF2
TNFAIP8L1
UMPS
TMEM17
WDR90
NUDT16
DOK7
TACO1
WFDC3
DNTTIP1
TRAPPC10
DIP2C-AS1
TECPR1
ASL
SMAGP
APOC2
C18orf21
FTCDNL1
SLC31A1
AIFM2
IQCN
TMEM139
CYB5A
ZHX3
GLTPD2
ASGR1
DRG2
FKBP15
BCL9L
RMND5A
ZNF444
ATXN1
TMEM71
PHF20L1
PLA2G12B
ZNF564
PPP1R27
DAO
ZBED4
BLCAP
CYP8B1
CCDC71
MIEF1
UGGT2
TJAP1
MAF1
OPA3
TREH
RWDD3
GFM1
UBA5
ASAH1
CALML4
CAMK1
ZFYVE27
TBCCD1
PDZK1
BRIP1
TMEM150A
POMGNT1
NFATC3
RBP5
LEAP2
METTL8
DCAF17
SLC30A1
RDH5
RASSF5
MTMR4
AMT
OTULIN
DLC1
C4BPB
ITPK1
GDF15
ACOT2
SMIM11B
SMIM11A
SLC39A5
PLXNB1
PELO
ITGA1
GFER
MTARC1
E2F5
C2orf88
F2
MRPL40
HIRA
TMCO1
ADAP1
CAMKK2
TECR
DNAJB1
SECTM1
TUBG1
SLC35D2
RETREG3
C1orf210
NSUN5
C1orf115
PRXL2A
CHD1
SLC26A1
AMN
POLRMT
SLC22A7
CRYBG1
FUT10
SRSF4
ACACB
ATXN2
VARS2
MAP2K3
CRPPA
MTFR2
MOGAT3
CMPK1
BIRC2
EIF4EBP3
ZNF747
SPATA2
SSTR1
AK3
PIPOX
VPS28
GSTM4
MARK2
SHF
ATP11A
CACNB2
SENP1
PFKM
PROS1
KIFC3
PYROXD1
SUN2
TP53I3
FBLN1
CREBRF
SERPINA1
C4B_2
C4B
TIMMDC1
EHHADH
STK24
CCDC68
TF
RFPL2
CCR6
GPHA2
CLYBL
HPR
WNK4
NFE2L2
TANK
CYP4F3
TPT1
GPR108
SDHAF1
DDC
TTC38
PALM3
ADGRA1
PDGFB
SH3BP2
SMYD5
SDC1
SCP2
C1orf174
NIPAL1
CNGA1
RFX7
FBXO33
VTN
TCAF1
ARHGEF16
TOGARAM1
KLHL28
THNSL1
PHF14
AJM1
PKIG
GALM
C3orf86
SURF4
BMF
SOAT2
SMIM12
RNF149
TTI1
RPRD1B
NUFIP1
GPALPP1
CLIC1
DLX2
SLC2A8
RPS15
ANKRD40CL
ANKRD26
KMT5A
ATP1B1
FAM47E-STBD1
FAM47E
SHPK
CTNS
GSTK1
DGKD
FUT5
CPHXL
KIAA0754
SERPINC1
DCLRE1C
FAAP20
CCDC93
RCL1
NDRG2
PRR5
NCOA2
ACSL5
TXLNA
MTIF2
PRODH2
IGF2BP2
EPHX1
CTDSP1
POLD4
RAD50
TMEM140
HOXA3
C2
C8A
MBNL2
DECR2
LIME1
CD86
RASA4B
ZNF548
MASP2
BPHL
CYP7A1
KIF16B
LOC110384692
C4A
BDH1
NADK2
CMTM8
ZSWIM8
POM121
MBNL1
MAGI1
CES1
CBWD5
AP4S1
ZNF687
PGAP3
ERBB2
PRR13
CYP27A1
CCDC42
FDX1
FAM161B
COQ6
CCL16
SLC22A18
CEP43
RNPEP
MRPS30
AASS
TACC2
ARMC5
APOM
JMJD1C
HRG
CX3CL1
TCOF1
FAHD2A
SLC5A9
SMIM6
ZNF223
G6PC
RBP4
SHPRH
RSPH14
SLC35A3
ZNF565
ZNF146
ZBTB7C
IRF5
TMEM19
CLDN23
PUS3
ADH4
GANAB
LAMTOR5
IFFO1
ACAT2
APOA2
NCOA4
GALE
AKTIP
BPIFB2
MYO1E
LSM2
ID1
RNF19A
TIA1
PRDM10
SYNCRIP
TUBG2
PTK2B
USP42
MRPS24
CIDEC
BRCA1
HPD
ARL5A
MAOB
RNF31
PSME2
C11orf52
UTP14C
RBM42
PLIN1
SHFL
KCNAB2
SEMA4B
ATP10D
AQP3
GDPGP1
CIB1
STARD5
NINJ1
CCDC146
YEATS4
NOTCH2NLC
SPATS2L
PCGF5
HYAL2
TMEM218
NOTCH2NLB
NOTCH2NLA
FBXW5
C8G
MED31
C17orf100
SEC14L5
NTMT1
ALDH5A1
KPNA7
TMEM86B
PNPO
CES2
IL13RA1
AGFG2
GLT8D1
STX16
SLC10A5
MDM2
RNF220
PTPN18
PIKFYVE
RBM33
TYMSOS
TYMS
ASB9
ORM1
GOLPH3
TMEM14A
LTV1
GUCA2B
AGMO
CCDC43
CRLS1
IL1RN
SLC27A5
SEMA4G
GPR137
ABCD4
ST3GAL6
AGPAT1
SNX7
DDX19B
REP15
LZTS3
BTBD19
PEF1
LURAP1L
CBWD3
AXL
CEP152
ZBTB8OS
RBBP4
ECI1
AIG1
A1BG
RHBDD1
FHIT
GPD1
TOP1MT
FADS6
ZNF468
NFATC2
CYCS
TMEM256
SLC39A6
ELP2
DNAJC15
MAP3K7CL
ABCB4
PARP4
GRB7
SYN3
NRBF2
SCO2
MOK
ESRRA
UFL1
LPIN3
ZNF600
UBE2V2
HBP1
TWF2
RASA4
LSM14A
INSR
PCK1
ABCC2
SOCS5
PTGR2
NAP1L4
DIXDC1
POT1
ANPEP
TEX9
SLC40A1
HP
USP37
CNOT9
FGD4
IRS1
TTI2
CYB5B
LRIG2
LOC112577592
SHC1
CKS1B
FLVCR2
HPN
RNF5
EFNA2
DECR1
GMPPA
SLC2A4RG
ATAT1
CYP4F11
SLC7A9
HPS5
GTF2H1
SWI5
GOLGA2
PYGL
SCARA5
PKP2
HSPA2
SNRPA
LIN54
NR2F6
SCAF4
RALGPS2
TMEM82
CPN2
SORT1
HINT2
GREB1
SUOX
COQ5
SRSF5
ARSB
CLRN3
CDC34
UCK1
MME
IMP3
HUS1
ENPP7
LRP1
FBXL12
RTL10
GNB1L
SHH
HERC5
TMEM181
EPS15
CLDN14
DNPEP
SERPINB9
PRLR
TBP
PSMB1
GYS2
LDHA
MGMT
GNAL
NAGA
BRPF3
ATP6V0E2
ZSCAN32
ZNF174
HEATR5A
TMTC3
CEP290
GFOD1
TMEM202
OSBP2
TSPYL5
CBWD6
AGTRAP
STN1
P2RX7
SASH1
SLC34A3
COMT
IGSF9
ASXL1
ABCF2-H2BE1
ABCF2
PJA2
SLC25A1
MON1A
HAL
RREB1
CRYGC
IPP
AMPD2
GNAT2
FABP1
SUSD2
MIIP
ZNF862
ACOT7
CFAP299
FAM185A
CFAP20
PHF8
DYRK1B
SFXN1
HMGCL
PTBP1
BSDC1
ADGRA3
SGK3
SLC7A5
KHDRBS1
EFNA1
CRNKL1
CFAP61
TTC12
AKR1C4
PHF7
BAP1
PWP1
LAD1
TUBB4B
MYG1
TFDP2
PLEC
PPP1R3D
FAM217B
PARP16
ELK4
LGALS4
RFC5
STX18
SERPIND1
ACSM2A
DVL3
GAB2
FAT4
GDF10
NR1H3
CYP21A2
LDLRAD4
KYNU
ANTXR2
GSTT1
VOPP1
GPCPD1
CCNH
BCAR3
ECSIT
SLC51B
USP10
LIMS2
UPB1
SLC25A16
MTHFD2L
ACOT1
CLUH
SLC25A34
C4orf3
NRSN2