ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748425 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX15717764: EndoC-BH1

◢ SRX15717768: EndoC-BH1

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◣ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX15717766: Hep G2

◢ SRX15717767: Hep G2

◢ SRX15717769: Hep G2

◢ SRX15717777: hESC derived endocrine progenitor cells

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX15717776: hESC derived hepatoblasts

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX15717770: hESC derived pancreatic cells

◢ SRX15717775: hESC derived pancreatic cells

◢ SRX15717778: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ SRX15717771: Pancreatic islets

◢ HNF4A: STRING

MIA2
NDUFS1
EEF1B2
PHF12
SKIV2L
NELFE
PPIP5K2
CSTF1
AURKA
CCDC107
RBKS
BABAM2
C11orf49
SCAF11
WDR74
SFRP5
NEK2
CCDC90B
MTRNR2L2
MTRNR2L8
WDR36
ATXN7L1
RTBDN
POLDIP3
CD2BP2
KNL1
RGPD2
RGPD1
CDC14B
U2SURP
RPS3A
RABGGTB
NR1I3
ZNF764
SNRPA
C19orf54
CEP152
IST1
ZSWIM3
ACOT8
IDH1
EIF1AD
BANF1
GFI1B
TSC1
RPS7
SH3D19
RPL27
RAB17
CD86
EPS15
MRPL11
FBXW5
C8G
PRR3
GNL1
POLRMT
ACY1
SYT7
MAP3K11
METTL7B
SNRPF
HRCT1
DSTYK
C1orf174
SASH1
PIKFYVE
TAOK3
RPL41
UROS
BCCIP
COQ5
ZNF383
DEAF1
GOLGA4
PPP1R37
CLCF1
ABLIM1
OCIAD2
FAM98B
TBCCD1
LARP1
SAMD1
FCHO2
RBM27
MAN2C1
ZNF564
BORCS7
OGT
MRPS28
USP37
CNOT9
PDAP1
BUD31
ZNF219
SNX16
PRKCSH
CCDC151
HNRNPH1
GUCA2A
MRPS30
ARPIN-AP3S2
ARPIN
NEURL2
CTSA
ATP5MC3
SH3D21
GOLGA8B
LBX2
STAT3
INTS12
GSTCD
PRAP1
KMT5A
ZKSCAN2
PIM3
CHD1
RAD50
CREB3L3
TNFRSF10B
C11orf86
TJP3
KPNA7
PAFAH2
KCNMB4
LRSAM1
SNRPB
RPL12
NUDCD1
SMARCD2
RAB11A
TMEM181
SHISA5
ARNT
SEC23A
TRIP12
FBXO36
KRTAP5-7
ATXN2
ZNF747
RAB34
GFM1
MMP15
RBIS
GDF15
EPB41L4B
ALG10B
RPGRIP1L
FTO
CCNI
PAQR4
PPP1R13L
MKRN3
MIA3
RPL34
ALG10
CMC1
PSMA5
RCAN1
ADPRHL1
SELENOP
PYY
NAGS
CCDC77
KDM5A
BAZ1B
RAD51AP1
C12orf4
CENPN
RFX2
DENND5B
TRIM15
GALK2
COPS2
CLASP1
SH3BP5L
WDR90
H4C3
TMEM143
SYNGR4
CCNL1
CALM2
LHB
MVP
EPS8L3
BIRC2
TTI1
RPRD1B
USP16
IGSF23
TDP2
ACOT13
ATF7-NPFF
ATF7
METTL25
CCDC59
TARS2
TATDN3
NSL1
LRP1
AAR2
ORC2
GAB1
PHF14
PABPN1
NFXL1
PPP6R1
IQCN
GPANK1
CSNK2B
ASF1B
NUP62
IL4I1
ATF5
HERC5
PRRG2
NOSIP
HYAL2
ETV4
PDE4C
EPS8
RBBP5
RPS29
PJA2
SLCO2B1
H4C11
SRSF11
LRRC40
MTFR2
ISCA1
VPS25
HEXIM1
LAMTOR5
ZBTB48
NUCKS1
RAB11B
ZNF165
DDA1
EIF4A2
PPP1R12B
SLC41A2
LAPTM4A
KATNB1
RPS6KA1
NQO2
GPR137
TINAGL1
SAXO2
EFL1
MAP4K5
ATL1
NUF2
MRPL30
MITD1
NFATC4
BANP
LGALS1
GRPEL2
ATF4
SMG7
INTS4
PARP2
PDE11A
VPS54
PIPOX
KDM3A
PRDM10
ZC3H12D
ZNF335
UBE2R2
NUP107
TBP
PSMB1
FBRS
POLG
OPA3
SHF
PSD
KIF16B
NOL8
CENPP
MMADHC
NCSTN
COPA
NR2F1
RMND1
ARMT1
GBF1
NR1D1
TRUB2
COQ4
GBA
GPR108
C12orf57
S100A16
TTI2
TMEM101
STK35
GCHFR
NME1
B4GALT4
TIAL1
PPP1R9B
GNAL
ZDHHC6
VTI1A
HAAO
PAOX
PKP4
HNF1A
ZNF232
AGMAT
VIL1
IQANK1
FAM83H
ZNF567
APOB
SMG5
ABCC6
KIF21A
PCYT2
AQP11
PINK1
DENND2B
F10
CDKN2AIP
RAB37
GSDMD
VAMP5
ABCD3
HADHB
HADHA
NRL
DCAF11
AHCY
PLXNB2
ENTPD8
GAMT
ACY3
UBR4
F7
ACOX2
PLEKHG6
C9orf64
AHSG
PDXP
XYLB
FYB2
SUCLA2
SLC7A7
RAP1GAP
NID1
C1GALT1
MGST2
ATXN7
NR0B2
DOK4
NDUFA6
ZNF214
NLRP14
CBS
GDI2
ISOC1
RAB32
ANKS4B
CFB
ASGR2
PANK1
SLC45A4
PPIL2
CHST13
PUS10
PEX13
SLC19A3
ANXA9
SLC2A14
CDIP1
TMEM177
TCIRG1
RIN3
TRIM14
C3
IFNGR1
DNAJC22
AJUBA
ALKBH7
NEU4
FASTKD1
HSPE1-MOB4
HSPE1
HSPD1
IL32
MGAT1
ATP7B
ALG11
STARD7
MCRIP1
HMGCS1
UGDH
GNG4
COPS4
ZNF184
GIPC2
KLC4
SDCBP2
PERP
CPPED1
CYB5R3
IL11RA
SLC35D1
ETFA
TM4SF5
MRPL2
IL7
FNIP1
PEPD
PDLIM2
HNMT
SEPTIN9
TMBIM1
SARDH
PALM2AKAP2
DHRS3
SMLR1
MRPL20
CXCL17
PAAF1
COA4
AGT
STAT5B
MPND
APOA1
GPT
EIF6
DNMT3A
IQGAP2
AKAP1
VEGFA
MOV10L1
DONSON
SLC28A1
PTPA
CRAT
LOC100129484
MAF
UBA6
NGEF
HSD17B11
TFR2
FGFR4
UHRF1BP1L
ABAT
CSRNP1
HGD
TTC31
PROZ
LCAT
SNTG1
TRAF4
MSH5
TMEM254
TK1
AFMID
MFN2
EPHX2
CRK
CBY3
SLC36A1
ERF
INHBE
IYD
SPPL2A
SCARB1
LINS1
ASB7
PKLR
CLDN19
AMACR
PHACTR4
ASPDH
MST1
MMACHC
CCDC142
CAMSAP3
SEC16B
SH3BGRL2
C11orf24
VANGL1
BLOC1S5
ANK3
KRT8
QPRT
MYADM
APOC3
NIPSNAP1
EPS8L2
ZNF512B
SOD2
GRTP1
PAK4
N4BP2L1
SERPINF1
POLR2H
ACO1
VTA1
NMBR
F12
ZBTB4
POLR2A
SOS1
MYL12B
ZFAND2B
PGPEP1
SLC22A3
TPRN
GPR35
NUP210
ADGRG7
INTS9
HMBOX1
TRMT2A
RANBP1
GALK1
RBMS1
ADD3
SF3B2
TNS3
MLF2
PGLYRP2
TNFAIP8L1
UMPS
TMEM17
NUDT16
DOK7
TACO1
WFDC3
DNTTIP1
TRAPPC10
DIP2C-AS1
TECPR1
ASL
SMAGP
APOC2
C18orf21
FTCDNL1
SLC31A1
AIFM2
TMEM139
CYB5A
ZHX3
GLTPD2
ASGR1
DRG2
FKBP15
BCL9L
RMND5A
ZNF444
ATXN1
TMEM71
PHF20L1
PLA2G12B
PPP1R27
DAO
ZBED4
BLCAP
CYP8B1
CCDC71
MIEF1
UGGT2
TJAP1
MAF1
TREH
RWDD3
UBA5
ASAH1
CALML4
CAMK1
ZFYVE27
PDZK1
BRIP1
TMEM150A
POMGNT1
NFATC3
RBP5
LEAP2
METTL8
DCAF17
SLC30A1
RDH5
RASSF5
MTMR4
AMT
OTULIN
DLC1
C4BPB
ITPK1
ACOT2
SMIM11B
SMIM11A
SLC39A5
PLXNB1
PELO
ITGA1
GFER
CSNK1A1
MTARC1
E2F5
C2orf88
ZNF827
F2
MRPL40
HIRA
TMCO1
ADAP1
CAMKK2
TECR
DNAJB1
SECTM1
TUBG1
SLC35D2
RETREG3
C1orf210
NSUN5
C1orf115
PRXL2A
SLC26A1
AMN
SLC22A7
CRYBG1
FUT10
SRSF4
ACACB
ALDH3A2
VARS2
MAP2K3
CRPPA
MOGAT3
CMPK1
EIF4EBP3
SPATA2
SSTR1
AK3
VPS28
GSTM4
MARK2
ATP11A
CACNB2
SENP1
PFKM
PROS1
KIFC3
PYROXD1
SUN2
TP53I3
FBLN1
CREBRF
SERPINA1
C4B_2
C4B
TIMMDC1
EHHADH
STK24
CCDC68
TF
RFPL2
CCR6
GPHA2
CLYBL
HPR
WNK4
NFE2L2
TANK
CYP4F3
TPT1
SDHAF1
DDC
TTC38
PALM3
ADGRA1
PDGFB
SH3BP2
SMYD5
SDC1
SCP2
NIPAL1
CNGA1
RFX7
FBXO33
VTN
TCAF1
ARHGEF16
TOGARAM1
KLHL28
THNSL1
AJM1
PKIG
GALM
C3orf86
SURF4
BMF
SOAT2
SMIM12
RNF149
NUFIP1
GPALPP1
CLIC1
DLX2
SLC2A8
RPS15
ANKRD40CL
ANKRD26
ATP1B1
FAM47E-STBD1
FAM47E
SHPK
CTNS
GSTK1
BAAT
DGKD
FUT5
CPHXL
KIAA0754
SERPINC1
DCLRE1C
FAAP20
CCDC93
RCL1
NDRG2
PRR5
NCOA2
ACSL5
TXLNA
MTIF2
PRODH2
IGF2BP2
EPHX1
CTDSP1
POLD4
TMEM140
HOXA3
C2
C8A
MBNL2
DECR2
LIME1
RASA4B
ZNF548
MASP2
BPHL
CYP7A1
LOC110384692
C4A
BDH1
NADK2
CMTM8
ZSWIM8
POM121
MBNL1
MAGI1
CES1
CBWD5
AP4S1
ZNF687
PGAP3
ERBB2
PRR13
CYP27A1
CCDC42
FDX1
FAM161B
COQ6
CCL16
SLC22A18
CEP43
RNPEP
AASS
TACC2
ARMC5
APOM
JMJD1C
HRG
CX3CL1
TCOF1
FAHD2A
SLC5A9
SMIM6
ZNF223
G6PC
RBP4
SHPRH
RSPH14
SLC35A3
ZNF565
ZNF146
ZBTB7C
IRF5
SAXO1
RRAGA
TMEM19
CLDN23
PUS3
ADH4
GANAB
PEX11G
IFFO1
ACAT2
APOA2
NCOA4
GALE
AKTIP
BPIFB2
MYO1E
LSM2
ID1
RNF19A
TIA1
SYNCRIP
TUBG2
PTK2B
USP42
MRPS24
CIDEC
BRCA1
HPD
ARL5A
MAOB
RNF31
PSME2
C11orf52
UTP14C
RBM42
PLIN1
SHFL
KCNAB2
SEMA4B
ATP10D
AQP3
GDPGP1
CIB1
STARD5
NINJ1
CCDC146
YEATS4
NOTCH2NLC
SPATS2L
PCGF5
TMEM218
NOTCH2NLB
NOTCH2NLA
MED31
C17orf100
SEC14L5
NTMT1
ALDH5A1
TMEM86B
PNPO
CES2
IL13RA1
AGFG2
GLT8D1
STX16
SLC10A5
MDM2
RNF220
PTPN18
RBM33
TYMSOS
TYMS
ASB9
ORM1
GOLPH3
TMEM14A
LTV1
GUCA2B
AGMO
CCDC43
CRLS1
IL1RN
SLC27A5
SEMA4G
ABCD4
ST3GAL6
AGPAT1
SNX7
DDX19B
REP15
LZTS3
BTBD19
PEF1
LURAP1L
CBWD3
AXL
ZBTB8OS
RBBP4
ECI1
AIG1
A1BG
RHBDD1
FHIT
GPD1
TOP1MT
FADS6
ZNF468
NFATC2
CYCS
TMEM256
SLC39A6
ELP2
DNAJC15
MAP3K7CL
ABCB4
PARP4
GRB7
SYN3
NRBF2
SCO2
MOK
ESRRA
UFL1
LPIN3
ZNF600
UBE2V2
HBP1
TWF2
RASA4
LSM14A
INSR
PCK1
ABCC2
SOCS5
PTGR2
NAP1L4
DIXDC1
POT1
ANPEP
TEX9
CYP17A1
SLC40A1
HP
FGD4
IRS1
CYB5B
LRIG2
LOC112577592
SHC1
CKS1B
FLVCR2
HPN
RNF5
EFNA2
DECR1
GMPPA
SLC2A4RG
ATAT1
CYP4F11
SLC7A9
HPS5
GTF2H1
SWI5
GOLGA2
PYGL
SCARA5
PKP2
HSPA2
LIN54
NR2F6
SCAF4
RALGPS2
TMEM82
CPN2
PTS
SORT1
HINT2
GREB1
SUOX
SRSF5
ARSB
CLRN3
CDC34
UCK1
MME
IMP3
HUS1
ENPP7
FBXL12
RTL10
GNB1L
SHH
CLDN14
DNPEP
SERPINB9
PRLR
GYS2
LDHA
MGMT
NAGA
BRPF3
ATP6V0E2
ZSCAN32
ZNF174