ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026268 | Caco-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◣ SRX026268: Caco-2

◢ SRX15717764: EndoC-BH1

◢ SRX15717768: EndoC-BH1

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX15717766: Hep G2

◢ SRX15717767: Hep G2

◢ SRX15717769: Hep G2

◢ SRX15717777: hESC derived endocrine progenitor cells

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX15717776: hESC derived hepatoblasts

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX15717770: hESC derived pancreatic cells

◢ SRX15717775: hESC derived pancreatic cells

◢ SRX15717778: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ SRX15717771: Pancreatic islets

◢ HNF4A: STRING

PAOX
PHF12
SLC7A7
CSTF1
AURKA
PLEKHG6
MIA2
PDXP
MVP
SELENOP
PRAP1
PKP4
HNF1A
KRTAP5-7
SLCO2B1
VIL1
SCAF11
PANK1
RPS7
POLD4
C11orf24
ACY3
CYP17A1
LBX2
CLPB
RNPEP
EIF6
PCYT2
APOC3
SCNM1
LYSMD1
ZNF567
CACNB2
IYD
MMADHC
GPR35
CCDC90B
RAB37
NUDT13
TCIRG1
DENND2B
ADAP1
F10
UNK
SHISA5
STARD4
CDK5RAP1
ANKRD40CL
NR1I3
SLC45A4
ABLIM1
AP2S1
AQP11
F7
NEK2
KIF21A
TMEM115
IL32
SMAGP
ZNF225
PEPD
LGALS2
MMACHC
CIDEC
RBKS
BABAM2
TMPRSS4
DIP2C-AS1
LRRC29
ACOT7
NOSTRIN
CDC14B
SDHAF1
ACOX2
CREB3L3
TATDN3
NSL1
FCHO2
ACSS2
FDX1
NR0B2
BTNL8
PABPN1
MYADM
SOS1
TMBIM1
KLC4
MRPL2
CWC25
IDH1
EPS8L3
APOB
ZNF529
WDR36
EMP1
PINK1
HNMT
HAAO
BANP
TCEA2
TFPT
PRPF31
CTU1
MEP1A
PHB
HGD
AHSG
TSNAXIP1
RANBP10
TECR
DNAJB1
GNG4
NDUFS3
KBTBD4
ACY1
ATXN7L1
GSDMB
RAB17
BRCA1
FASTKD1
ANK3
NEURL2
CTSA
VAMP5
PEX11G
SLC19A3
AJUBA
WNK4
H4C3
ZNF165
ALPI
DNAJC22
ST3GAL6
STX16
NDUFA6
SEC16B
METTL7B
BCL9L
RSPRY1
JMJD1C
MRPL44
SOCS5
TRAF4
SMG8
DYNC1I2
C19orf53
TMEM140
ZNF112
CYB5R3
WDR46
PFDN6
ORC2
DHRS11
WNK1
KNL1
IFRD2
OTULIN
BLCAP
AKR1C4
ZNF223
SEH1L
MCRIP1
SSTR1
IFNGR1
UMPS
MAP3K11
SH3BGRL2
GUCY2C
ZFYVE27
AHCY
APOBEC1
HEPACAM
PLXNB2
BOD1
INVS
ERP44
MRPL24
ANKS4B
MRPL20
KBTBD6
DHRS3
CCDC146
MBNL2
ECI1
CLDN4
MYO1A
HSD17B11
CCR1
ZNF226
INHBE
DDX23
BORCS7
SLC22A9
BOLA1
STK31
COX7C
AGMAT
TRIP4
ZNF512B
MUC13
MED15
NR1D1
RDH5
ZNF230
EIF3F
DECR2
OPA3
DOK4
TACO1
PAAF1
COA4
AMACR
SUCLA2
TMEM254
AXL
DSTYK
IST1
DNASE1
PUS10
PEX13
TTC31
CCDC142
TDP2
ACOT13
DFFA
SMG5
TMTC3
CEP290
PPRC1
TBCCD1
XYLB
SEC23A
MOGAT3
SH3D19
COX16
RBBP5
FAM149B1
ECD
SLC51B
IFTAP
AHCYL2
AIFM2
RPL34
BMS1
SPRY4
WDR74
ZNF155
TMEM181
MGST2
TMEM139
ESRRA
CHMP4B
TFEC
PPIP5K2
TNS3
GFM1
TNFRSF10B
FAM168A
GPR137
EDEM2
PRKCSH
CCDC151
DDC
TM9SF4
ARHGDIB
TM4SF5
MTMR4
NDUFC2-KCTD14
NDUFC2
MLF2
MTIF2
TMEM101
SIAE
VTN
SMPD3
NUP107
POLDIP3
WHAMM
COPS4
SLC28A1
RAB32
SNX17
EIF2B4
CCDC107
GOLGA6L2
SNAP47
JMJD4
CDIP1
WDR24
IGSF23
BLOC1S5
TOMM22
TNFAIP1
IFT20
DMXL1
SLC39A5
TRIM14
PAFAH2
PRCC
IFIT3
SMLR1
ZSCAN22
RPS6KB2
CLIC1
RPGRIP1L
FTO
ALG10
ABCC2
AAR2
ZFYVE1
CNOT2
FBXL19
CLRN3
PPP1R12C
IQANK1
FAM83H
SOAT2
CTSB
MRPL21
IGHMBP2
CRTC2
GSTO1
USP48
WASHC2A
NR1H2
CBLC
CYP4F3
ZBTB45
MAF
C1orf210
NUF2
TK1
AFMID
RALGPS1
CISD1
TMEM177
GDF15
PCK1
TMEM92
SNRPB2
SLC22A18
MFRP
C1QTNF5
ZNF17
PDZK1
ZNF205
EHBP1
SSBP1
GNAL
ALG10B
RTEL1
PERP
C4BPB
SMYD5
CCDC93
SPATA2
POM121
NODAL
NPRL2
CYB561D2
BIRC2
SKIV2L
NELFE
SELENOI
ADGRF3
ZNF232
ZNF384
ZNF219
AGT
DUSP15
AATK
ELOC
HBP1
LSM14A
INTS4
MMP15
RBM33
MRPS16
ZNF235
IQSEC3
TUT1
FYB2
NUFIP1
GPALPP1
TBC1D23
DUSP18
ZNF564
UNC5B
INTS9
HMBOX1
QPRT
STK24
LRSAM1
RPL12
MIA3
ATXN2
FEM1A
FRA10AC1
SDHD
PHF14
N4BP2
B4GALT4
GAB1
GALM
KMT5A
ZNF461
SUPV3L1
DNMT3A
NID1
CRK
TAOK3
DUS2
DDX28
TOR1AIP1
TRIM40
TMEM256
ALAS1
ABCC6
PLA2G12B
ZNF487
NPAS4
SURF4
PPP1R12B
ZNF320
CRNKL1
CFAP61
BMF
CMC1
IDH3B
PALM2AKAP2
HSP90B1
CPHXL
SLC17A5
C11orf49
PRR5
CHKA
ZFP91
LPXN
ZSWIM3
ACOT8
HNF4A
MYO7B
HRCT1
COMT
ZNF628
BUB1B
TCOF1
SLC30A4
CRBN
CSTF2T
HADHB
HADHA
DIDO1
GID8
VIPAS39
AHSA1
MRPL40
HIRA
BPHL
NOP16
HIGD2A
UPB1
PPIL2
MRPL48
ZNF354A
SAR1B
SCP2
TJP3
LIN37
ZNF211
ZNF419
SYMPK
FOXA3
KAT7
NDUFA2
IK
CYP27A1
RHOBTB2
VPS25
AMN
HPS5
GTF2H1
DEAF1
ZNF444
KDM4D
CWC15
SLC10A5
ZNF343
LIF
CBS
RFPL2
CES1
PRRG2
NOSIP
AKAP1
RPS3A
ENGASE
MAPKAPK5
TMEM71
PHF20L1
ZNF749
HSD17B14
LARS1
GSDMD
MLEC
ZNF140
HSPH1
ZNF354B
LEKR1
TOMM40
CLNS1A
ANKRD26
HDHD3
SLC23A3
KRR1
BAIAP2L2
SOX30
C5orf52
NR5A2
VPS50
HEPACAM2
METRNL
SEPSECS
H4C8
FSTL3
APOA2
WDPCP
MDH1
TOMM70
LNP1
EIF1AD
BANF1
COPS7A
USP30
EIF2S2
DENND5B
RAB1A
SPHK2
RPL18
BCL7B
S100A16
IMP3
CCNL1
ANXA9
PARD3B
SLC25A16
GSK3A
NEDD8-MDP1
NEDD8
GMPR2
PRR13
MRPS31
SDCBP2
MARK2
FAAP20
MS4A10
WASHC2C
KRTAP5-4
SORT1
FUT2
TRIM15
TREH
PTK2B
SRC
ACTR1A
SUFU
UBA6
CCR6
DPPA4
CCDC77
KDM5A
ATXN7
TWF2
TMEM230
ZC3HC1
CDHR5
ALKBH7
IRF5
NME1
ZNF224
HSPE1-MOB4
HSPE1
HSPD1
GPR132
RAB11FIP3
NRBF2
RNF121
LOC100133315
RPIA
CD86
CNKSR3
EMSY
PHB2
TBL3
GATB
ALKBH8
MAN2C1
NSUN5
CRYGC
KBTBD7
PI3
VPS28
RAB30
PEMT
SARDH
CALML4
TEFM
MRPL11
DNM1L
RABAC1
SELENOH
COASY
SSNA1
ANAPC2
GRWD1
SPATS2L
ATP11C
CSRP1
CAND1
ZNF668
ZNF646
MARS1
ARHGAP9
MRPL16
INO80B
METTL8
DCAF17
ALDH3B1
CUBN
ST3GAL2
VCPIP1
C8orf44-SGK3
STAT3
ZC3H10
ATP5MC3
DCDC1
ZNF57
GEMIN6
SULT1C2
MICOS13
HSD11B1L
MYL12B
MIEF1
COMMD3-BMI1
COMMD3
TMEM144
NCKAP5
TSSC4
RNASEH2C
NUDCD1
UBA5
TMEM86B
ZNF181
DUS3L
RARS1
GDI2
MGAT1
APOM
RBM39
SEC22B
NOC4L
DDX51
RPLP2
SSUH2
MTMR9
GMPPA
ARNT
BOD1L1
C12orf43
OSCAR
NDUFA3
KCNK10
TLDC2
PSMB6
STYXL1
MDH2
AQP10
NDUFS1
EEF1B2
IQCN
RBM42
MT1F
RAP1GAP
TMEM150A
OPA1
CCDC174
WIPF1
LRIG2
PWP1
SYNJ2BP-COX16
SYNJ2BP
SNRPA
C11orf86
ZNF221
ISY1-RAB43
ISY1
SLC35A3
POLK
CERT1
C15orf39
KATNB1
A1CF
SCAND1
MRPL30
MITD1
EIF3D
GFER
PJA2
INTS12
GSTCD
ABCF2-H2BE1
ABCF2
NR2F2
H4C12
IPO4
BTRC
LMTK3
NAT10
PACSIN2
DNAJC11
RBP2
PYROXD1
MAP1LC3B2
ZNF485
WFDC3
DNTTIP1
C17orf75
ADD3
OAS1
SHANK2
RBSN
CTNNBL1
AGPAT3
TXNDC9
EIF5B
ADGRG7
TANK
NR1H3
ACP2
ZNF37A
RPL6
TPR
ODR4
TTC12
ACAP3
MRPS34
EME2
TMEM184A
KMT5B
ZNF214
NLRP14
DLC1
HINT2
HSD17B4
DCAF6
JRK
KRT8
SOD2
SENP1
PFKM
MAP4K5
ATL1
NUP153
AP2B1
TOMM7
TTI1
RPRD1B
UBQLN4
LAMTOR2
SMIM11B
SMIM11A
HOXA3
DHRS12
RBM6
TMEM199
POLDIP2
TRMT2A
RANBP1
TRUB1
OBI1
STAU1
ZNF420
PHF7
BAP1
ZFYVE19
DNAJC17
CIAO2A
DPM3
U2SURP
FAM228B
SF3B6
ZNF2
HMGCS1
GDPGP1
CIB1
PNPO
GTF2H4
TRAK1
ZNF764
SEMA4G
KMT2D
F2
NIPAL1
CNGA1
PRRG4
CCL15
SLC25A45
TASOR2
EDN3
CRADD
RAVER1
SUPT7L
SLC4A1AP
PALM3
UTP14C
SLC34A3
PATZ1
ZNF805
ZMAT2
LOC100129484
CAMSAP3
TOGARAM1
KLHL28
ZC3H12D
PLEC
GFM2
MRPL53
TP53I3
PRDM10
ABCC9
TMEM11
ACSL5
CHCHD2
EXD2
LYZL6
PKLR
GSTK1
CD99
HTRA2
ACP6
APBB1
MRPL3
ZKSCAN4
PGPEP1
NOL7
MAIP1
RPS13
RPS6KA1
ZNF23
SHROOM1
RPL29
KLHL20
SRSF4
TIMM13
CST5
LRRC59
CIAO3
ARPIN-AP3S2
ARPIN
RCAN1
TMCO1
TMEM245
PAK4
HNF1B
ARSF
NDUFAF5
ESF1
CWF19L2
GUCA2A
WDR87
SIPA1L3
ZNF26
C16orf91
CALR3
C19orf44
PLEKHG1
ASAH1
ZNF234
TOB2
ZNF56
POLR2H
SP2
TSC2
NTHL1
ATP5F1D
SLC2A8
LTBP3
TOP3B
ZNF417
CFB
NQO2
SCO2
FRMPD1
GTF2H3
EIF2B1
TIMM23B
PARG
CPPED1
GRTP1
AIG1
PNKD
TMEM242
JPH2
ZSCAN25
HNRNPA1L2
AAMP
ID1
GAB2
SLC41A2
CWC22
MRPL12
RPS28
NDUFA7
THAP11
PSMA5
MNAT1
CXCL2
POLR3F
DZANK1
PSMD11
DYRK2
GGNBP2
DHX35
SLC4A2
CDK5
CDK12
ING4
NRL
DCAF11
SLC30A1
ZNF337
ZNF551
AMOTL2
UFD1
CDC45
SNX7
TRIM31
MYL3
NCEH1
ZNF879
CYP2S1
UBR4
TAF11
SLC35B4
ASGR2
MPND
MST1
PTGR2
MAPK6
PPP2R5B
RPS26
MRPS22
TARS2
RBM8A
GALK2
COPS2
ZNF827
DCLRE1C
BAZ1B
DLAT
CIC
NUCB1
NDUFA9
AKAP3
ZUP1
SLC31A1
FKBP15
C11orf52
NOS2
ZW10
CEP43
UTP3
NTAN1
CCP110
SLC7A9
NUP54
TIMM23
HK1
FYCO1
ZNF473
VRK3
AGFG2
BRPF3
ZMAT1
TTC33
ERAL1
RACGAP1
PSENEN
FGFR4
MYO1E
RPS19
RHBDD1
IRS1
OSBP2
SOWAHD
SERPINB6
USP8
TLCD2
DUS4L-BCAP29
DUS4L