ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PMEPA1
NODAL
CCDC92
FGF8
CAV1
PRKAB2
CHD1L
SNX18
ZNF148
SKIL
COPS8
STOX2
ID1
LEFTY1
FBRS
MTRNR2L2
BMPR2
GAS2L1
SPACA6
NPFFR2
WDR74
MRI1
STAM2
KLF10
OLFM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PPP2R2A
CHST11
ZNF853
ZSWIM4
NPAS4
LARS2
BUD13
NOCT
ZSWIM7
TTC19
LRP6
RNF32
NOTCH3
KAT6A
FOXJ3
LDLRAD4
LRRC37A3
MARCHF3
MLLT11
CDC42SE1
DRAP1
C11orf68
GRIK2
MTIF2
FAM184A
CALD1
MAP7
MARCHF5
CPEB3
CER1
NUF2
MTRNR2L8
EP400
NEDD4L
GAB1
JMJD1C
CYB561
CD8A
DCAF10
DST
RCBTB2
MTHFD1L
ABLIM1
USPL1
HMGB1
PTGS2
ANKRD46
CCDC88A
NSUN6
BAMBI
GNB2
PCK2
NOTCH2
CCDC50
RET
UAP1
RAPH1
LRRC59
EML1
SNX14
WWC2
PNMA1
TBC1D5
TEAD4
PLPPR3
SMAP1
GNL2
DNAJC6
PMAIP1
ZNF609
PTPN18
ARL4A
SLC20A1
GRM1
E2F3
GPR180
SMIM8
PCCA
VANGL2
TBX22
BOD1L1
MIPOL1
ATXN7L2
MAML3
COPS7B
FAM168A
HTR5A
TRDMT1
HINT3
AFF1
USP47
NFIA
RANGAP1
ZC3H7B
RCAN3
C3orf52
RNF213
KANSL1L
JDP2
ZFYVE16
DGAT2
RGPD6
RGPD8
RGPD5
BAZ2A
XKR7
WDFY1
P2RY2
KHK
NCOA3
RAB23
SLCO5A1
ZNF521
USP15
SAR1B
IKZF5
ACADSB
PCDHAC1
FEM1C
FDXACB1
C11orf1
RRP8
ILK
MTDH
ASCC3
LOC100287896
LIPT2
KDM5B
FBXL12
C4orf36
LEMD3
SRF
CBWD5
CBWD3
CBWD6
LSM14A
PARL
SOWAHC
SEPTIN10
FAM227B
DTWD1
MARCHF4
RNF103
TLCD5
MMP24OS
MMP24-AS1-EDEM2
IQSEC3
MRPL39
SMPD4
MZT2B
GGT7
AMOTL1
PDE4DIP
GTF2H2
NRSN1
TSPAN12
RNF11
FAM162A
CCDC58
PXK
PPT1
IGF2BP3
GADD45G
REEP5
MCOLN1
MEX3B
MTRNR2L9
FRA10AC1
NCOA5
XPO5
POLH
TNPO1
TTC39B
PRC1
SYNJ1
C9orf40
REST
TMEM121B
LRP12
MNAT1
SLC44A1
MFAP3L
RNF6
TCEAL8
AVPR1B
LPCAT3
IFT52
ZBTB45
E2F2
LRCH1
TMEM215
ACSL3
ERLEC1
ASB3
NMRAL1
HMOX2
USP37
CNOT9
CPNE4
CTNNB1
KLHL18
KIF9
TBPL1
ZNF395
ERI1
MYO6
OCIAD2
ZNF664-RFLNA
ZNF664
CDKN2AIPNL
DCP1A
STX16
EXOC2
ZNF341
ARHGAP28
ZNF839
SPSB2
CHST13
PIGO
TMEM250
POLE3
C9orf43
AGO3
PDE1C
PTBP2
CEMIP2
HEXB
ARHGAP26
CERCAM
ERBIN
GTF2H2C
GTF2H2C_2
EXD1
CHP1
FOSL2
MDC1
CCNH
EIF2B2
GLRA3
GARS1
PPIH
RTN4
ZDHHC23
USP42
NTSR2
CRBN
CPVL
LOC728392
HTR1E
DDIT4
ERMP1
ZCWPW2
AZI2
METAP2
LAMC2
MOB4
KIAA1841
WBP1L
ANKRD18A
SEC22A
ITGB1
HDAC2
RWDD1
EFHD1
FABP6
MRM3
GLOD4
GADD45B
CAMSAP2
TMEM132A
KLF17
BPTF
SOCS2
DESI2
POLR3E
AAR2
CLDN6
NCBP3
FCHO2
ATP23
B3GLCT
TMEM170A
SHF
LAYN
CFAP161
BRIX1
ZNF354A
IFNGR1
AK3
PRMT9
USP53
EIF4G1
ULK2
MRPL2
KLC4
DNAJC10
ZNF654
CGGBP1
ZFHX3
OXTR
KIFC3
TUT7
TXNL4A
RFESD
CCDC107
LIMK2
MEIG1
UCHL1
GGH
SEC62
FNBP1L
MANEA
SDHA
CCDC127
OPRM1
ELMO1
TTC9
C12orf42
TEFM
NDRG2
DHRS13
VPS28
HMGN2
PRKAA1
ARHGEF40
HBEGF
BTC
AKAP12
CAPS2
ARL6IP1
KBTBD2
FXR1
NIT2
GNAS
NXPE3
MTARC2
RPGR
STMN1
EPCAM
MED23
HABP4
GTF3C3
XYLB
SLC24A1
GABRG3
ZNF165
HECTD1
MAP2K1
C12orf73
OSBP2
MDFIC
ANKK1
SLC9A1
PIK3R3
SLC35E2B
PDE8A
SMIM10L1
PRH1-TAS2R14
PRH1
MKX
MAPK15
FAM177A1
SLC39A6
ELP2
RUBCN
FYTTD1
CLTC
UBE2B
CDKL3
CCNL1
CCNI
UBE2D2
PET117
KAT14
ZNF641
ZNF48
HSP90AB1
PRDX1
CDC42EP3
PRUNE2
DMRTA1
TBL1XR1
KATNA1
GNAI2
LIG4
ABHD13
PABPC5
CPLX2
HERPUD2
XRRA1
SPCS2
NUDCD3
UCHL5
RO60
EYA3
PROSER1
NHLRC3
PDE8B
GATAD2B
ATAD2
PLK3
TMEM242
USP22
PHTF1
NANOG
MRPL38
CCPG1
C15orf65
STX18
PLEKHM3
PHIP
SPAST
AKAP9
TOR2A
GNAL
RBM15B
FYN
RIPK4
ITGAV
THAP4
ATG4B
PARK7
KLHL23
TEKT3
KCNH5
RUSC2
ATP5MPL
CHIC2
IL20
ANKRD50
HEXIM2
IQCH
AAGAB
FILIP1L
FGFBP3
DNAJC19
SPEF2
AMT
NAALAD2
DHRS3
BICD1
NLE1
DEGS1
TPD52
MTMR6
ZNF860
OSBPL10
SPOP
C15orf40
CCDC71L
TRIM9
CYP2U1
FAM151B
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SIK2
C8orf37
FAM98B
TSPAN14
L1TD1
MTF2
RMDN2
STK10
NDUFS3
KBTBD4
FAM120B
MAP3K4
EBAG9
PURA
KTN1
ELK4
TAF12
RNF224
CALB1
NAT8L
FAM107A
NFKBIA
METTL9
AFF4
TIPARP
TGFA
BLMH
CDC37L1
INKA1
MBOAT2
FAM221A
SYN2
CALM2
HNRNPR
PAK1
TMEM37
ARIH1
HCN1
AMPH
AFG3L2
NRSN2
MCM7
AP4M1
SKA3
MRPL57
PRMT5
LRRC37B
SNAPC5
HTR7
CRYBG1
PLCH1
KCNQ3
SST
AMOTL2
MKRN2
MYO1D
MND1
FUT8
FAM222B
THOC2
DSTYK
MSRB2
ANKRD12
GAREM1
CTSL
TRIAP1
RTKN2
KCNH1
PLCL2
RBPJ
ZC3H6
DNAJC3
ADAMTS3
AP3B1
ASAP3
WNT5A
RAD54L2
METTL2B
INTS12
GSTCD
PHACTR2
AMFR
HIPK1
CYP2R1
FOXN3
SLC30A5
TMX3
CCDC102B
PLAAT1
HECTD3
SSBP2
SYDE2
PKN2
TMEM263
GEMIN4
GAD2
DCP1B
TMEM267
SLC35E1
BAZ2B
CEP78
POT1
TJP3
BSCL2
SERPING1
GNG3
CNTNAP3
TGIF1
SLC35G1
STK32C
LRRC27
BAZ1A
RPTOR
ANKRD18B
FUT1
CALM1
ARL5A
MEF2A
STEAP3
NAA40
NCKAP1
SMAD3
SUMF2
TATDN1
NDUFB9
YAF2
EXD2
UAP1L1
CDKN2A
ADAMTS18
MAT2A
CARNMT1
FERMT2
ADRA1B
CNTN4
TCF12
HES6
HNRNPD
PAWR
TRMT6
MCM8
PTPN4
TEX10
TTLL7
RIMBP2
CABIN1
ACOT7
SLC35A3
TTLL9
RAB11FIP3
FRMPD1
SYT14
RNF166
CTU2
DTD2
MAPKBP1
YPEL3
AIFM3
VDAC2
CCN2
IFRD2
C17orf75
NR1H3
ACP2
TSKU
LYRM1
DCUN1D3
CCDC43
SEMA6A
MRPL40
HIRA
POLD4
CREBL2
ARID2
FBXO22
SMPDL3A
MAP4K5
ATL1
VPS18
AXIN2
DHRS4L2
SEC11A
THRB
MYO1B
AS3MT
SNTG2
NSUN7
CCKBR
IKZF3
HECTD2
LONP2
ABCC11
SPRYD7
SLX1B
SLX1A
BOLA2B
BOLA2
DYRK3
STK17A
HNRNPA2B1
CBX3
CHST15
GPHN
CACHD1
VGLL3
ACOXL
C8orf88
SEPSECS
ATG7
BARD1
RBIS
MPHOSPH8
TCF4
XKR4
SLC44A2
KCTD18
ARHGEF1
ELF2
COMMD8
SPAG1
TTC14
NUP153
TTC23L
ZBTB2
PSMF1
CCNL2
LOC101928764
RBM47
YARS1
S100PBP
SSH2
EFCAB5
PCID2
CUL4A
TAP1
PSMB9
PIK3C2B
PRLHR
ATAD1
KATNIP
GTF3C1
LOC107986453
UBN2
RBMS1
SUCO
EIF3A
URB2
TAF5L
TRAPPC11
RWDD4
SUPV3L1
ZNF846
RWDD2A
PGM3
TM2D1
ZNF280C
NOL11
RNF144B
UQCRC1
SRSF5
HERC6
TTC37
ARSK
GALNT3
GCLM
ATR
FZD1
RANBP2
SDE2
USP3
LDHA
RB1
ASAH1
FEZ2
RCOR2
SNRPN
TIMP4
FGD4
USP30
PIGH
MKS1
TMEM60
PHTF2
IL17RA
STXBP5L
DENND4B
GOLGA8A
CORO2A
MIXL1
NEIL2
FSIP2
FAM83B
UBE2Z
HBS1L
SNX19
SIDT2
FGF9
SLC25A51
PATZ1
CAMK1D
APCDD1
ELAVL2
CHMP4A
ZSCAN22
PCMTD1
RBP1
RSPO2
SUGCT
MPLKIP
PDCD6IP
CD24
EREG
CNTNAP5
OXR1
PSMD14
SOCS5
TLCD4-RWDD3
TLCD4
FAM174B
OTUD7B
U2AF1L5
U2AF1
STK32A
GPT2
RRM1
SPATC1L
ZC3H8
LNPEP
RNF7
SYNPO2
GPR160
ZNF594
TMEM222
RTN3
FBN2
WDHD1
SOCS4
KDF1
MYL12B
PTBP3
CYREN
ICE2
CCN1
SEMA3C
ARL14EP
CRH
SIRT1
KCTD11
SERPINE1
PPP6R1
TRIB1
PPP1R13L
POLR1G
DNAJB2
SMAD7
H4C4
NDUFAB1
TMEM9
RCOR3
RCL1
REV1
SLC45A4
SNX16
PLEC
COL7A1
SLC7A6
BRWD1
OPLAH
BRPF1
SPIN1
NTMT1
AIFM2
ADAM17
JRK
P2RX6
FBXL13
ARMC10
HPN
ZNF718
TRIM44
ZNF595
PLOD2
KDM1A
H2AZ2
CCDC200
CELSR3
ITPK1
NHLRC1
PIM1
TNFRSF12A
FSTL3
GZF1
ACVR1
TAGLN2
GSDMD
ALKBH7
BHLHE40
ACACA
NR1D2
NKIRAS1
KRAS
PRAME
MET
FLOT1
ANKS4B
HIBADH
POLR2J3
NUTF2
CENPT
RFX1
SLC39A13
RNFT1
TUBG1
RETREG3
SARAF
SERPINB6
KDM7A
ZBTB38
HPCAL1
NR4A1
TRMT2A
RANBP1
GLRA1
TUFM
SH2B1
ADAP1
KANSL3
THEM4
NEURL2
CTSA
TTC12
USP32
LZTR1
DGAT1
NDRG1
TSPAN10
NPLOC4
MTX2
EPHA10
ZNF697
GRHL3
NDUFAF6
FAM107B
KIF13A
L1CAM
TTC38
SREBF1
RNF130
MARCHF7
ARL8B
PRMT3
H4C12
MAPKAPK3
CISH
SLC16A1
TRIB3
RHBDD1
LYL1
DPY19L4
OBSL1
INHA
DCK
NFE2
SLC25A45
HEY1
NR2F6
NUB1
UBE3C
AKAP1
ZNF592
NBN
BARHL1
OSBPL6
SYNRG
DNAJB12
NBPF1
ADK
CBFA2T2
ZKSCAN2
SMARCD2
CPPED1
FAM168B
H4C11
TBC1D14
SSNA1
ANAPC2
ZNRF2
POLD1
SPATA1
PLEKHF2
PTPDC1
ZNRF3
NRL
RASAL2
AGPS
ANKRD28
MAF1
AXL
UBE2K
ZBTB4
POLR2A
IL13RA1
PIM3
KMT2A
DMTF1
USP9X
TMEM86A
ESCO1
KLHL12
PLEKHJ1
CX3CL1
RAB37
PGRMC2
SECISBP2
NOL4L
CYB5R4