ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702098 | hESC HUES64
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◣ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PMEPA1
ZNF148
PRKAB2
CHD1L
MTIF2
SNX16
CCDC92
SKIL
COPS8
ID1
OLFM2
USPL1
HMGB1
LEMD3
SNX18
BMPR2
HNRNPR
STOX2
HERPUD2
ZNF655
METTL2A
FDXACB1
C11orf1
CD8A
RUSC2
SCAF11
HABP4
SPACA6
NUF2
PDE4DIP
FBRS
SOWAHC
SEPTIN10
WIPF2
UAP1
EP400
MIPOL1
CCDC88A
CAMK2D
JMJD1C
STAM2
TRIOBP
PRKACB
RWDD1
DGAT2
ZBTB45
PAFAH1B1
USP47
SLC2A8
CDK5RAP2
SLAIN2
BAMBI
GNL2
ZFY
RAPH1
DEGS1
LRRC37A3
MDC1
ZSWIM7
TTC19
WWC2
H3-3B
NCOA3
BBS12
EXOC2
EI24
GTF2A1
RUNX1T1
SSBP2
KTN1
EIF4A2
PIGH
DRAP1
C11orf68
KRAS
CCN2
MTHFD1L
ATXN10
ELMOD2
MARCHF5
CPEB3
SNX14
XKR7
SARAF
USP22
METTL2B
H4C11
ZBTB4
POLR2A
MBD4
IFT122
ANKRD46
NOTCH3
ZNF48
DCP1B
PPP1R13L
POLR1G
ORC2
HEATR1
ACSL3
RNF11
RFT1
RPS8
SMAP1
ZNF697
REEP5
GGH
SCLT1
C4orf33
MAP3K4
TEAD1
HIF1A
SLC38A2
KLF10
SRF
SREBF1
MRPL44
TAB2
CKAP2
NRAS
LPCAT3
UBN2
RSU1
ACACA
PRC1
PPP2R2A
HNRNPC
EFR3B
TAPT1
ZNF664-RFLNA
ZNF664
ZBTB20
MED23
TBL2
LEPROTL1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UBE2B
CDKL3
ARL4A
GPR180
FRA10AC1
AVEN
TUFM
SH2B1
FBXW7
FRMPD1
ZNF354A
ZNF846
TEX9
SRSF6
ZFAND5
VKORC1L1
ST20-MTHFS
DNAJC3
UBE2S
RRP8
ILK
MTX2
HECTD1
B3GLCT
POLI
BFSP1
CAPS2
LARS2
BICD1
UBE2D2
FRMD6
ARMH4
CTNNB1
NUB1
SETD5
RNF32
MSANTD4
UBE2K
PMAIP1
FXR1
TGFA
APTX
DNAJA1
ZCCHC10
RASGEF1B
TCF12
PRSS47
SLC44A1
SLC25A32
DCAF13
SMAD9
BCKDHB
GNB2
MOB4
RBMS1
SLC9A1
TTC3
PIGP
PDE7A
MAP7
AKT3
TSC22D1
FILIP1L
TRPM3
HECTD2
C5orf49
SERPING1
LRP12
PLK3
ZNF654
CGGBP1
CEP112
MINPP1
ADAMTS18
DYRK3
UBE2F
TNPO1
PJA2
PLAAT1
SYDE2
PGBD1
RBSN
RB1CC1
CPLX2
CABIN1
FAM76A
CREM
TNRC6A
MRPS31
ARL14EP
SDHA
CCDC127
APMAP
MAPK6
INKA2
DDX20
STYX
FAM177A1
CAMSAP2
ATP2C1
RPS3A
PROM1
TRDMT1
ASCC3
RPLP0
TMEM222
GATAD2B
GTF2H2
CPSF6
MAP4
FHOD1
SIRT1
LRP6
TBC1D5
GAB1
METTL25
CCDC59
IKZF3
AFF1
MAP2K3
CALM1
PDIA3
KPNA5
AFG3L2
TBPL1
MAPK1IP1L
INTS10
F11R
PHIP
EED
PARVA
ZDHHC20
ADAR
U2AF1L5
U2AF1
UPF3A
NRSN1
UBR4
SOS2
CDC42EP3
ARL15
KCNB1
METAP1
PAWR
PNMA1
CHN1
GNAL
DCK
SLC12A4
JDP2
PHACTR2
TCAF2
ARPC2
FAM53C
CDC25C
PAQR3
KPNA1
SUPT20H
FAM222B
DMTF1
COPS7A
PALM2AKAP2
PPM1A
TSPAN12
ERMARD
NUCKS1
RB1
OTULINL
NFATC3
ABCD3
VEZT
FGD6
NOTCH2
LOC100287896
LIPT2
C16orf87
TSC22D2
XPO5
POLH
DZIP1
PLEKHF2
THAP4
ATG4B
FAM53A
RCL1
NDE1
MARF1
CDKN2AIP
COX20
UBE2Z
ANAPC4
CDK17
YTHDF3
PCF11
CAMK4
PRKAR2A
TXNL4A
PCCA
RBFA
SNX2
LIMS1
PRDX1
LRP2BP
ANKRD37
MND1
NRG3
ELK4
LAP3
ATAD2B
ARF4
CALM2
MRPL38
C8orf88
CREBZF
C12orf42
CCPG1
C15orf65
MARCHF7
HEXB
UFL1
TNFRSF21
C9orf40
SLC20A1
OSGIN2
HCFC2
GLT8D2
ERBIN
HNRNPA2B1
CBX3
FMNL2
UBE2D3
CISD2
PDLIM5
TOE1
MUTYH
HCN1
AMOTL1
KIF27
DPH5
RNF182
GCLM
HNRNPH3
PBLD
GOLGB1
PTPRD
TIPARP
ZNF76
DTWD2
VCP
FABP5
C7orf31
NDUFAF6
WASHC4
NSD3
SLC9B2
ITGB1
ARFGEF1
MYO1D
PANK2
LNPEP
TRIM41
EFHD1
FOXJ3
PPP1R21
RAB22A
ARPP21
BRWD1
ZC2HC1C
ACYP1
DSEL
XRRA1
SPCS2
WEE1
CTBS
GLO1
ZNF821
SLC17A5
H4C14
H4C15
THBS1
CADM2
CLTC
TSG101
MAP4K5
ATL1
ULK2
REV1
ASL
SLC25A51
CTNNAL1
SLC11A2
ASH1L
TOB1
H2AZ2
C3orf52
TRIQK
PRIM1
WDR74
NPAS4
MLLT11
CDC42SE1
MTRNR2L2
KCTD11
RBPJ
SERPINE1
PPP6R1
RNF103
TRIB1
IQSEC3
HTR5A
DNAJB2
MTRNR2L8
SMAD7
DHRS3
H4C4
NDUFAB1
ATAD2
ZNF341
TMEM9
RCOR3
MRPL2
KLC4
VDAC2
RNF213
SLC45A4
USP42
PLEC
COL7A1
SLC7A6
TGIF1
OPLAH
BRPF1
SPIN1
NTMT1
AIFM2
ADAM17
JRK
P2RX6
FBXL13
ARMC10
HPN
ZNF718
TRIM44
ZNF595
PLOD2
KDM1A
OTUD7B
CCDC200
CELSR3
ITPK1
ZC3H6
NHLRC1
PIM1
TNFRSF12A
FSTL3
GZF1
ACVR1
TAGLN2
ARL6IP1
GSDMD
NFKBIA
ALKBH7
BHLHE40
NR1D2
NKIRAS1
PRAME
MET
WDFY1
FLOT1
ANKS4B
HIBADH
POLR2J3
NUTF2
CENPT
RFX1
CTSL
SLC39A13
E2F3
RNFT1
TUBG1
RETREG3
KBTBD2
MTF2
SERPINB6
MRPL40
HIRA
KDM7A
ZBTB38
HPCAL1
NR4A1
TRMT2A
RANBP1
GLRA1
ADAP1
KANSL3
THEM4
ATXN7L2
NEURL2
CTSA
NODAL
BRIX1
TTC12
USP32
LZTR1
DGAT1
CCNL1
MYL12B
CCNI
NDRG1
TSPAN10
NPLOC4
EPHA10
GRHL3
FAM107B
KIF13A
L1CAM
TTC38
NCOA5
RNF130
ARL5A
PCK2
ARL8B
MTRNR2L9
PRMT3
H4C12
NCKAP1
MAPKAPK3
CISH
TBL1XR1
SLC16A1
TRIB3
RHBDD1
LYL1
DPY19L4
OBSL1
INHA
NFE2
SLC25A45
HEY1
MARCHF3
NR2F6
UBE3C
AKAP1
ZNF592
ZNF165
KLHL18
KIF9
NBN
BARHL1
OSBPL6
SYNRG
DNAJB12
NBPF1
ADK
CBFA2T2
ZKSCAN2
SMARCD2
CPPED1
FAM168B
BUD13
TBC1D14
SSNA1
ANAPC2
BPTF
KCTD18
ZNRF2
POLD1
SPATA1
PTPDC1
ZNRF3
NRL
RASAL2
AGPS
PIK3R3
ANKRD28
MAF1
DENND4B
AXL
IL13RA1
IKZF5
ACADSB
PIM3
KMT2A
USP9X
TMEM86A
ESCO1
KLHL12
PET117
KIFC3
KAT14
PLEKHJ1
CX3CL1
RAB37
PGRMC2
SECISBP2
NOL4L
CYB5R4
PARL
TBC1D13
SMURF2
HNRNPUL1
HES1
SMARCD3
LANCL2
ODC1
FBXO4
GP1BB
ZFAT
TIGD2
KANK2
CRLS1
ASPSCR1
IST1
MOB1B
PPP1R3C
WTAP
SOD2
MAPK1
MIA2
TARS1
SLC39A3
ATF3
SLC7A5
DCAF11
CTCF
TEN1
RICTOR
ACOX1
PKP4
NIPSNAP2
RNF166
ENOSF1
CTU2
SLX1B
SLX1A
BOLA2B
BOLA2
WDR36
TMEM242
NKD1
ATP7A
PHACTR4
MEMO1
GET4
MAML3
DCAF10
KMT2C
GBA
PPP5D1
NUP107
CALM3
TMEM87B
SGK1
RNF220
NDUFA4
ZNFX1
FASTKD1
RAN
MSH3
DHFR
KMT5B
RALGDS
PICALM
H6PD
DNAH14
ETV4
SFT2D2
FAM102B
GIPC1
METTL9
SLC35E2B
GCFC2
ARFGAP2
RNF19A
DSTYK
SEPTIN9
ICE2
DHX40
ABCC6
STX18
ID3
MIF4GD
DEAF1
RDX
PLEKHA7
NAMPT
GNG5
PDCL3
MEFV
BCAP29
ZNF641
GLTPD2
RNF139
CEP135
CRKL
ADGRG3
FGFR4
AFF4
AHCY
ZBTB40
YTHDF1
NDUFS7
ARSB
ABLIM1
IMPDH2
FKBP9
KIAA0232
TCTEX1D4
PHF3
NAT8
GTDC1
NUDCD3
SLC1A4
TEAD4
LAPTM5
MAT2A
CHGB
MRRF
MAPK8IP2
ATXN2
TEFM
GMEB2
ZNF451
SGK3
P4HA1
PXT1
PPCDC
KCTD20
UNKL
H4C3
TMEM51
SUN2
OXR1
NCOA4
C7orf26
CDKN2AIPNL
DTD2
PRR5
ATP5MPL
GPT2
PTP4A2
TTI2
E2F6
TMBIM6
MYADM
ERRFI1
TENT4A
FAM3C
ILKAP
SP3
KDM3A
BTBD19
UBAC1
S100A2
NOM1
KPNA7
EBAG9
TLK1
WDR62
THAP8
TPM1
SLBP
VPS26C
SRRM3
VPS29
RAD9B
CLPX
BCR
EPS15
OPN3
CHML
STAT1
AGO2
PURA
HNRNPH1
SMAD3
LSM2
PPP1R12B
SRD5A3
THAP12
GVQW3
SLC25A13
CLCF1
SFSWAP
DVL3
SERTAD2
VDAC1
SIL1
GSE1
RRAS
NDRG2
NAGK
SH3BP4
RRP1B
HSF2BP
SLC25A10
CAPRIN2
BOLA2-SMG1P6
BOD1L1
POLE3
C9orf43
KLF4
CYP20A1
STAT3
CTDP1
TADA2A
PPP1CB
NOL7
LARP1
LMO7
PPP1R13B
ARID1A
DST
HDDC2
GFI1B
FOXK2
MCUR1
LDLR
PIGO
ACOX3
RASSF10
RRAGC
ZER1
CHIC2
KIAA1586
PRELID3A
DONSON
DNAJB1
IFRD2
ATL3
OSMR
SNAP25
PRRT1B
PHTF1
ZNF713
POMZP3
COQ2
MAMSTR
USP31
SEC14L1
NLE1
ESYT2
NRSN2
LUC7L
MDM2
DDIT4
CARNMT1
DAGLB
SRSF7
DDX39A
HDAC6
POLD4
SRCAP
LOC730183
GPR160
ATR
SOCS2
ANKRD36
RABGGTA
ANK1
SEC24C
CTDSP2
TGFB1
GABPA
ATP5PF
ZNF34
VOPP1
TXNDC11
GORASP2
TRPC4AP
ATP5F1E
ZZZ3
NFAT5
WIZ
FAM162A
CCDC58
MCM7
AP4M1
HPCA
SLC35E2A
FCHSD2
ZNF787
MACROH2A1
KAT6A
GTF2IRD2
PLEKHM3
UBQLN1
ALDOA
RMDN2
B4GALT7
PPIA
EIF2AK1
DUSP9
RNPS1
ENO3
FGD4
TTLL4
GBE1
LENG8
ZNF609
MYLIP
ZSCAN31
SPPL2A
TRIAP1
NFE2L2
LIN9
IRF9
GSPT1
FAM227B
DTWD1
LBX2
C1GALT1
HSP90AB1
PSMD14
ROCK2
AP5S1
ERCC6L2
SRSF3
HINT3
DCLRE1B
AP4B1
KDSR
BTNL10
BCL2L11
GFUS
DHRS4L2
TMEM184A
SESN1
USP3
DDX59
NAB2
GCLC
KAZALD1
MSL2
KLHL5
ITGAV
MIOS
LRCH4
IL21R
FBXO24
RSAD1
FZD5
BIRC6
FGA
FZD1
BPHL
PPIL2
IVNS1ABP
XPOT
SPG21
PFKFB3
PER2
SIAH1
RIPK1
NR1D1
GPCPD1
GARS1
ECH1
PYGO2
NOCT
LOC101928120
GXYLT1