ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16499856 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◣ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

NPAS4
WDR74
HDX
IQSEC3
HTR5A
XKR7
ENOSF1
GLRA1
CELSR3
EPHA10
CPLX2
ATL3
SNX16
RAB37
L1CAM
SNAP25
ZFR2
MAPK8IP2
CCDC200
HPCA
PRLHR
BARHL1
ZCCHC7
NTSR2
TRIM44
LEMD3
ZFYVE27
ABCA3
SHISAL2A
EVI5
SST
MTRNR2L2
ZNF354C
VPS29
RAD9B
UPB1
LAMP1
COPS8
CYB5R4
WDR36
MARCHF4
HES6
RFC1
STMN3
TASOR2
ACTL6B
CPNE9
PRUNE2
OPRM1
CYP2R1
PTPRS
SLC39A3
NPPB
NEUROD4
LHFPL5
CELF6
ZNF280D
DHX40
UNC80
CEP295
GPR26
GCK
STOX2
PTP4A2
PMEPA1
PCNA
NEFH
DDX25
PDE4C
TOMM5
FAM111A
DYRK4
SNTG1
RASSF10
ZSCAN30
ASCL2
TMEM185B
GABRG2
KHSRP
DCHS2
FBRS
XKR4
KLHL35
GJA10
DNAH14
RHBDD1
RAX
PTPRN
NEK3
SRRM3
NOC3L
CNTLN
CACNG3
HHIPL1
CCDC85C
SMC1B
RIBC2
SLC12A5
RANBP3
EIF2B3
PRKAB2
CHD1L
ACSS1
SCGN
TRIM59
HENMT1
RNF130
HDAC2
UTP11
FOXRED2
KCNK12
CCDC92B
UCN
AP3B2
VGF
OGDHL
SPDYA
KCNB1
VSTM2B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ODC1
PDE1C
TDRD5
SCG3
HS3ST2
H4C11
CHGB
HNF4G
ZIK1
EZR
PPM1N
SRP19
PPP1R3D
FAM217B
TTYH2
KDM3A
HCRT
PPP1R3C
USP14
HBQ1
CRH
DIABLO
CACNA1B
H2BC12
H2AC12
GPR78
SRRM4
CPQ
SEH1L
IKZF3
MANEAL
BICDL1
CDIP1
CKLF-CMTM1
CKLF
PKDREJ
NEXMIF
CCNL1
BMP4
SFRP4
ZBTB32
ZNF75A
TIGD7
GLYATL1
NADK2
STEAP1B
RNF32
AIP
ARFGAP3
CARTPT
PGRMC2
E2F6
GPR158
RPH3A
RRP1B
HSF2BP
TRIM26
TBX10
H4C9
CCDC88C
MARCHF11
GET4
DDX56
GLS2
CTXN2
C3orf14
MCM6
RPP25
CHRNB2
SIRT4
CHGA
DIO3
FZD4
GPR6
TASOR
TPH2
UGT8
DNAJC6
ZNF292
ZCWPW1
MEPCE
PRDX1
YDJC
GRM1
CDK5RAP3
RAMAC
FZD9
SRSF7
SYT5
H2BC5
SLC35F4
NSG2
RPL14
CCDC92
CMC1
COPS7A
PLLP
SOX30
UBE2Q1
RTN2
B3GALNT1
FAM221A
TUBGCP3
ZNF131
EIF5A2
KCNC1
CCT2
STAG3
GPC2
SPHK1
ZNF501
VWC2L
DNMT3A
ASNS
H4C12
BEST1
FAM185A
SLC6A11
SUGCT
MPLKIP
ANKLE1
H4C14
MRRF
H4C15
GABRD
KPNB1
INPP5F
KLF9
MOB4
PRR3
GNL1
TAF7
CLDN11
WASHC2A
TDRD10
SHE
TRIM14
GRIA2
TACSTD2
SLC9A2
ZNF148
POLE4
C10orf88
TSEN54
CASKIN2
DR1
LRRC8B
RPL13A
ZNF485
STK25
ATIC
UBE2G2
CCDC169-SOHLH2
CCDC169
FAM184B
CCNI2
POLDIP3
ADNP
NHLRC1
CDC16
ZNF239
ERVMER34-1
H4C6
AVPR1A
NOP14
GRK4
CCNB1
FJX1
SYCE2
MESP2
UBE2D3
CISD2
SKA3
MRPL57
VCL
MGA
ORC2
H2AC11
H2BC11
NDUFAF2
ERCC8
MTHFD2
TMED1
PPIA
H4C4
H1-2
SLC6A4
RRN3
RAB4A
PMVK
NRXN1
H4C3
CHEK1
SNX14
CLCN7
EGR2
AGPAT5
AKAIN1
JMJD1C
SIGMAR1
PANK2
EFCAB13
CALB1
L3HYPDH
JKAMP
TEX30
MTIF2
RAD50
IRAK3
CALM2
GCFC2
H3C2
TMX3
CCDC102B
SMPDL3A
HNRNPR
CASC3
ZNF420
ARL14EP
CASD1
ZFP30
MTF2
ERBIN
EBAG9
THUMPD3
CNTRL
C5
H2BC4
H2AC6
RAB11FIP1
EEF1A1
ALDH3A1
CNBP
LUC7L
SKIL
SIRT1
MLLT11
CDC42SE1
KCTD11
FDXACB1
C11orf1
RBPJ
SERPINE1
STAM2
OLFM2
PPP6R1
RNF103
TRIB1
PPP1R13L
POLR1G
LPCAT3
MIPOL1
DNAJB2
ID1
GNB2
BMPR2
LRP12
MTRNR2L8
SMAD7
DHRS3
UAP1
EXOC2
NDUFAB1
CCDC88A
EP400
ATAD2
ZNF341
LRRC37A3
TMEM9
RCOR3
MRPL2
KLC4
ZNF664-RFLNA
ZNF664
RCL1
MTHFD1L
REV1
VDAC2
CAPS2
RNF213
SLC45A4
MDC1
USP42
CLTC
PLEC
COL7A1
KLF10
SLC7A6
TGIF1
TMEM222
BRWD1
OPLAH
BRPF1
LRP6
SPIN1
MRPL38
DRAP1
C11orf68
SLC44A1
NTMT1
AIFM2
SLC9A1
ADAM17
JRK
PLK3
P2RX6
FBXL13
ARMC10
HPN
ZNF718
DGAT2
ZNF595
HERPUD2
ZBTB45
RWDD1
PLOD2
KDM1A
OTUD7B
H2AZ2
BAMBI
ITPK1
CTNNB1
LARS2
ZC3H6
PIM1
TNFRSF12A
FSTL3
GZF1
ACVR1
NOTCH2
CCPG1
C15orf65
TAGLN2
ARL6IP1
USPL1
SMAP1
HMGB1
GSDMD
NFKBIA
ALKBH7
MAP3K4
BHLHE40
ACACA
CD8A
NR1D2
NKIRAS1
KRAS
PRAME
MET
WDFY1
FLOT1
UBE2B
CDKL3
ANKS4B
HIBADH
POLR2J3
NUTF2
CENPT
RFX1
CTSL
LOC100287896
LIPT2
SLC39A13
XRRA1
SPCS2
E2F3
ARL4A
RNFT1
SLC20A1
GNL2
TUBG1
RETREG3
KBTBD2
SSBP2
FOXJ3
SARAF
SERPINB6
MRPL40
HIRA
KDM7A
ZBTB38
HPCAL1
NR4A1
TRMT2A
RANBP1
TUFM
SPACA6
SH2B1
ADAP1
CALM1
KANSL3
THEM4
NCOA3
ATXN7L2
NEURL2
CTSA
NODAL
BRIX1
TTC12
USP32
LZTR1
RRP8
ILK
DGAT1
MYL12B
CCNI
NDRG1
ZSWIM7
TTC19
TSPAN10
NPLOC4
MTX2
ZNF697
GCLM
GRHL3
NDUFAF6
FAM107B
KIF13A
TTC38
WWC2
NCOA5
SREBF1
ARL5A
PCK2
MARCHF7
ARL8B
MTRNR2L9
PRMT3
NCKAP1
MAPKAPK3
CISH
TBL1XR1
SLC16A1
ANKRD46
TRIB3
CCN2
LYL1
DPY19L4
TRDMT1
OBSL1
INHA
TSPAN12
DCK
NFE2
SLC25A45
HEY1
ACSL3
MARCHF3
NR2F6
RNF11
NUB1
UBE3C
AKAP1
ZNF592
ZNF165
KLHL18
KIF9
NBN
OSBPL6
SYNRG
DNAJB12
NBPF1
ADK
RAPH1
NUF2
CBFA2T2
SRF
TBC1D5
ZKSCAN2
SMARCD2
CPPED1
FAM168B
BUD13
GATAD2B
TBC1D14
SSNA1
ANAPC2
BPTF
KCTD18
ZNRF2
POLD1
SPATA1
PLEKHF2
PTPDC1
ZNRF3
NRL
BICD1
RASAL2
AGPS
PIK3R3
ANKRD28
MAF1
DENND4B
AXL
UBE2K
ZBTB4
POLR2A
IL13RA1
IKZF5
ACADSB
PIM3
KMT2A
DMTF1
UBE2D2
USP9X
TMEM86A
ESCO1
KLHL12
PET117
KIFC3
KAT14
PLEKHJ1
CX3CL1
SECISBP2
NOL4L
FRA10AC1
PARL
TBC1D13
SMURF2
HNRNPUL1
HES1
SMARCD3
SLC25A32
DCAF13
LANCL2
FBXO4
GP1BB
ZFAT
TIGD2
KANK2
CRLS1
ASPSCR1
IST1
MOB1B
WTAP
SOD2
MAPK1
MIA2
TARS1
ATF3
SLC7A5
DCAF11
CTCF
TEN1
RICTOR
ACOX1
PKP4
NIPSNAP2
RNF166
CTU2
SLX1B
SLX1A
BOLA2B
BOLA2
TMEM242
ITGB1
NKD1
ATP7A
USP22
MRPL44
PHACTR4
MEMO1
MAML3
DCAF10
KMT2C
GBA
PPP5D1
NUP107
CALM3
SETD5
TMEM87B
HEATR1
SGK1
RNF220
NDUFA4
ZNFX1
NDE1
MARF1
FASTKD1
RAN
MSH3
DHFR
KMT5B
RALGDS
PICALM
H6PD
TTC3
ETV4
SFT2D2
FAM102B
GIPC1
TCF12
METTL9
SLC35E2B
ARFGAP2
RNF19A
DSTYK
SEPTIN9
PAFAH1B1
ICE2
ABCC6
STX18
ID3
USP47
MIF4GD
ZNF354A
DEAF1
RDX
PLEKHA7
NAMPT
GNG5
PDCL3
MEFV
BCAP29
ZNF641
GLTPD2
RNF139
CEP135
CRKL
ADGRG3
FGFR4
AFF4
CDKN2AIP
AHCY
ZBTB40
YTHDF1
NDUFS7
ARSB
ABLIM1
IMPDH2
SNX18
FKBP9
KIAA0232
ZC2HC1C
TCTEX1D4
PHF3
ACYP1
TRIOBP
UBN2
NAT8
GTDC1
NUDCD3
SLC1A4
TEAD4
LAPTM5
TIPARP
MAT2A
PRC1
GAB1
CDK5RAP2
PIGP
ATXN2
TEFM
GMEB2
RUSC2
ZNF451
SGK3
RFT1
RBMS1
P4HA1
PXT1
PPCDC
KCTD20
UNKL
TMEM51
TOE1
SUN2
MUTYH
OXR1
NCOA4
C7orf26
CDKN2AIPNL
DTD2
PRR5
ATP5MPL
GPT2
SOWAHC
SEPTIN10
ZNF76
TTI2
TMBIM6
MYADM
ERRFI1
TENT4A
CABIN1
FAM3C
ILKAP
SP3
BTBD19
UBAC1
S100A2
NOM1
KPNA7
TLK1
WDR62
THAP8
TPM1
SLBP
VPS26C
SYDE2
CLPX
BCR
EPS15
OPN3
CHML
STAT1
AGO2
PURA
HNRNPH1
SMAD3
C16orf87
LSM2
PPP1R12B
SRD5A3
THAP12
GVQW3
SLC25A13
CLCF1
SFSWAP
AFG3L2
DVL3
SERTAD2
COX20
VDAC1
SIL1
GSE1
RRAS
NDRG2
NAGK
SH3BP4
REEP5
HEXB
SLC25A10
CAPRIN2
BOLA2-SMG1P6
BOD1L1
ZNF48
POLE3
C9orf43
KLF4
CYP20A1
STAT3
CTDP1
TADA2A
ERMARD
PPP1CB
NOL7
LARP1
LMO7
PPP1R13B
ARID1A
DST
HDDC2
GFI1B
FOXK2
MCUR1
LDLR
PIGO
DYRK3
ACOX3
RRAGC
ZER1
CHIC2
MAPK6
KIAA1586
PRELID3A
DONSON
DNAJB1
IFRD2
OSMR
PRRT1B
PHTF1
ZNF713
POMZP3
COQ2
SRSF6
MAMSTR
USP31
SEC14L1
NLE1
ESYT2
NRSN2
MDM2
DDIT4
CARNMT1
DAGLB
LIMS1
DDX39A
HDAC6
POLD4
PDE4DIP
SRCAP
LOC730183
GPR160
ATR
SOCS2
ANKRD36
RABGGTA
ANK1
SEC24C
KTN1
CTDSP2
TGFB1
GABPA
ATP5PF
ZNF34
VOPP1
TXNDC11
GORASP2
ZBTB20
TRPC4AP
ATP5F1E
ZZZ3
NFAT5
WIZ
UBR4
FAM162A
CCDC58
MARCHF5
CPEB3
MCM7
AP4M1
OSGIN2
SLC35E2A
FCHSD2
ZNF787
MACROH2A1
KAT6A
GTF2IRD2
PLEKHM3
UBQLN1
ALDOA
RMDN2
B4GALT7
EIF2AK1
DUSP9
RNPS1
ENO3
FGD4
TTLL4
GBE1
MED23
LENG8
ZNF609
MYLIP
ZSCAN31
SPPL2A
TRIAP1
NFE2L2
HECTD1
LIN9
IRF9
GSPT1
FAM227B
DTWD1
LBX2
C1GALT1
HSP90AB1
ELK4
PSMD14
ROCK2
AP5S1
ERCC6L2
SRSF3
HINT3
PGBD1
DCLRE1B
AP4B1
KDSR
BTNL10
BCL2L11
UBE2F
GFUS
DHRS4L2
TMEM184A
SESN1
USP3
DDX59