ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16499855 | iPS cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◣ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

NPAS4
WDR74
XKR7
HTR5A
IQSEC3
HDX
RAB37
ENOSF1
SNAP25
CPLX2
EPHA10
ATL3
MAPK8IP2
CELSR3
GLRA1
L1CAM
SNX16
VPS29
RAD9B
NEFH
SST
BARHL1
CCDC200
ZFR2
PRLHR
HPCA
NTSR2
LEMD3
MARCHF4
CPNE9
CELF6
DHX40
OPRM1
CYB5R4
ZFYVE27
NEUROD4
SNTG1
WDR36
RANBP3
SLC12A5
TRIM44
ANK1
SHISAL2A
CEP295
PRKAB2
CHD1L
SLC39A3
GPR26
EVI5
CYP2R1
UPB1
NPPB
PTP4A2
HES6
RHBDD1
SRRM3
PTPRS
STOX2
ZNF75A
TIGD7
KCNH6
ABCA3
PDE4C
CHRM4
SCGN
HHIPL1
CCDC85C
HCRT
STK25
COPS8
PCNA
ZCCHC7
RTN2
ZNF354C
TMEM179
GPR78
TASOR2
HES3
KCNK12
GRIA2
KCNC1
UNC80
DYRK4
LCLAT1
CADPS
ASCL2
ZIK1
NOC3L
ZNF280D
CPQ
SCRT1
LAMP1
E2F6
HS3ST2
CCDC92B
IKZF3
KDM3A
SVOP
GPR6
SLC35F4
CHGB
CHRNB2
NRXN1
CDC16
GCK
ARFGAP3
KCNB1
FZD9
RFC1
BMP4
DDX25
OGDHL
H4C3
MANEAL
XKR4
TMEM268
SOX30
ZCWPW1
MEPCE
CACNG3
MARCHF11
PRUNE2
TACSTD2
USP14
TSEN54
CASKIN2
SKA3
MRPL57
B3GALNT1
VGF
DIABLO
UCN
ODC1
PKDREJ
ANKHD1-EIF4EBP3
ANKHD1
VSTM2B
VWC2L
UGT8
SLC34A2
GABRG2
KLHL35
PMEPA1
NEK3
ACTL6B
CARTPT
NEXMIF
TMEM185B
GJA10
PTPRN
TRIM59
UTP11
SFRP4
COPS7A
CACNA1B
GET4
SRP19
TPH2
RAX
CPD
RNF130
H4C9
STMN3
HNRNPR
NPDC1
TEX30
MAPK8
CDIP1
GUCY1A2
HBQ1
FAM221A
EFHD1
PLCH2
MLLT11
CDC42SE1
LHFPL5
ZBTB32
CRH
STXBP2
CACNG2
EIF2B3
EIF5A2
SMC1B
RIBC2
FAM163B
TUBGCP3
ANKLE1
SYT5
CALM1
RNF32
TASOR
LACC1
CCDC122
KLF9
H4C11
RRP1B
HSF2BP
MCM6
TDRD5
GRM6
FBRS
GABRD
SLC6A5
DRD2
BICDL1
MIPOL1
MSH5
LRIT2
E2F3
H2BC8
H2AC8
OXT
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PGRMC2
CKLF-CMTM1
CKLF
STAG3
GPC2
H3C6
CCDC92
C10orf88
CPNE4
ZNF239
PPP1R3C
HDAC2
DCHS2
GPR158
PSMD7
CHGA
MEX3D
AK2
LHFPL3
SPHK1
ATP6V1B2
AIP
XKR9
LACTB2
TMEM121B
IRAK3
H1-2
ATP2A1
TBX10
H4C12
FOXRED2
C3orf14
GSX1
POLDIP3
MTHFD2
ISM1
FAM111A
RPH3A
JMJD1C
ADNP
DUT
EXD1
CHP1
GDAP1
MMP24
CERS6
H4C6
BCL2L10
PLLP
CCDC71L
H3C2
KHSRP
PRKAR1B
SCAMP5
PGBD2
ARHGAP45
ZNF566
GRM1
NME6
ANKRD34C
FAM184B
RXFP3
CTNNB1
H4C8
HNRNPH1
SLC25A13
DNMT3A
HDAC4
FAM185A
MKLN1
TMED1
DNER
SIRT4
COA7
LMCD1
PMS2
AIMP2
CCDC126
STEAP1B
EPM2A
DNAJC6
EGR2
RASSF10
GTF2H2C_2
GTF2H2C
ZNF148
ZC3H6
H4C14
SRSF7
EDRF1
ARL17B
ARL17A
USPL1
HMGB1
GCFC2
GTF2IRD2
GTF2IRD2B
SEZ6L2
ASPHD1
NOP14
GRK4
GLS2
ZSWIM7
TTC19
PRCC
AKR1E2
H4C15
MLF1
SPDYA
PAQR4
SIMC1
ICE2
PYURF
PIGY
HERC3
PDE1C
SCG3
CNTLN
PGBD5
CAPRIN1
LRRC8B
RPS6
UBE2I
DNAH14
TARS3
CETN3
ASCL4
AGPS
H2BC18
H3C13
GTF3A
ZNF131
YIF1A
CISD1
ACSS1
N4BP2
PTDSS1
MTERF3
RAB4A
LAP3
KPNB1
THUMPD3
RPL31
THOC3
TMEM186
PMM2
MRRF
H2BC4
H2AC6
RPL27A
SLC6A11
GORASP2
PPP1R3D
FAM217B
TBC1D15
KCNT2
SEH1L
AGBL3
ZDHHC17
TOMM5
U2SURP
FJX1
GDA
ORC2
CCL28
AVPR1A
PIK3R3
ESYT3
ACBD6
SYT14
CDCA7
RPL21
ANKRD18B
PIP5KL1
TEFM
TTI2
EFCAB13
EIF1
PPIA
RSU1
H2BC12
H2AC12
ZNF454
SLITRK1
TRDMT1
EPB41L5
CBR1
DCP1B
LRRC58
PUM2
ANKRD36B
TMEM18
CHEK1
H4C2
FBXW4
VENTX
FBXL13
ARMC10
PTPDC1
FZD4
EPCAM
GRIN1
CFDP1
ERMARD
CCNC
MPHOSPH6
EXOSC6
OR1E2
VSX1
XK
NUDT15
PSAT1
RPP25
PM20D2
MSL2
ZFP62
POLE4
BCAT2
ZNF441
NT5C
CCDC146
CTDP1
ARHGEF5
HENMT1
IREB2
RBM25
H2BC5
PBX3
ADRB1
ERRFI1
DDX1
DIO3
ZSCAN31
TXNDC15
USP4
CD8A
MTF2
SECISBP2
LUC7L
HNF4G
UBFD1
EARS2
MOB4
H2BC15
H2AC15
RBM43
NXPH2
H4C13
H3C11
GMCL1
POLR3E
CYP2U1
ATF4
RCOR3
SKIL
SIRT1
MTIF2
MTRNR2L2
KCTD11
FDXACB1
C11orf1
RBPJ
SERPINE1
STAM2
OLFM2
PPP6R1
RNF103
TRIB1
PPP1R13L
POLR1G
LPCAT3
DNAJB2
ID1
GNB2
BMPR2
LRP12
MTRNR2L8
SMAD7
DHRS3
UAP1
EXOC2
H4C4
NDUFAB1
CCDC88A
EP400
ATAD2
ZNF341
LRRC37A3
TMEM9
MRPL2
KLC4
ZNF664-RFLNA
ZNF664
RCL1
MTHFD1L
REV1
VDAC2
CAPS2
RNF213
SLC45A4
MDC1
USP42
CLTC
PLEC
COL7A1
CALM2
KLF10
SLC7A6
TGIF1
TMEM222
BRWD1
OPLAH
BRPF1
LRP6
SPIN1
MRPL38
DRAP1
C11orf68
SLC44A1
NTMT1
AIFM2
SLC9A1
ADAM17
JRK
PLK3
P2RX6
HPN
ZNF718
DGAT2
ZNF595
HERPUD2
ZBTB45
RWDD1
PLOD2
KDM1A
OTUD7B
H2AZ2
BAMBI
ITPK1
SNX14
LARS2
NHLRC1
PIM1
TNFRSF12A
FSTL3
GZF1
ACVR1
NOTCH2
CCPG1
C15orf65
TAGLN2
ARL6IP1
SMAP1
GSDMD
NFKBIA
ALKBH7
MAP3K4
BHLHE40
ACACA
NR1D2
NKIRAS1
KRAS
PRAME
MET
WDFY1
FLOT1
UBE2B
CDKL3
ANKS4B
HIBADH
POLR2J3
NUTF2
CENPT
RFX1
CTSL
LOC100287896
LIPT2
SLC39A13
XRRA1
SPCS2
ARL4A
RNFT1
SLC20A1
GNL2
TUBG1
RETREG3
KBTBD2
SSBP2
FOXJ3
SARAF
SERPINB6
MRPL40
HIRA
KDM7A
ZBTB38
HPCAL1
NR4A1
TRMT2A
RANBP1
TUFM
SPACA6
SH2B1
ADAP1
KANSL3
THEM4
NCOA3
ATXN7L2
NEURL2
CTSA
NODAL
BRIX1
TTC12
USP32
LZTR1
RRP8
ILK
DGAT1
CCNL1
MYL12B
CCNI
NDRG1
TSPAN10
NPLOC4
MTX2
ZNF697
GCLM
GRHL3
NDUFAF6
FAM107B
KIF13A
TTC38
WWC2
NCOA5
SREBF1
ARL5A
PCK2
MARCHF7
ARL8B
MTRNR2L9
PRMT3
NCKAP1
MAPKAPK3
CISH
TBL1XR1
SLC16A1
ANKRD46
TRIB3
CCN2
LYL1
DPY19L4
OBSL1
INHA
TSPAN12
DCK
NFE2
SLC25A45
HEY1
ACSL3
MARCHF3
NR2F6
RNF11
NUB1
UBE3C
AKAP1
ZNF592
ZNF165
KLHL18
KIF9
NBN
OSBPL6
SYNRG
DNAJB12
NBPF1
ADK
RAPH1
NUF2
CBFA2T2
SRF
TBC1D5
ZKSCAN2
SMARCD2
CPPED1
FAM168B
BUD13
GATAD2B
TBC1D14
SSNA1
ANAPC2
BPTF
KCTD18
ZNRF2
POLD1
SPATA1
PLEKHF2
ZNRF3
NRL
BICD1
RASAL2
ANKRD28
MAF1
DENND4B
AXL
UBE2K
ZBTB4
POLR2A
IL13RA1
IKZF5
ACADSB
PIM3
KMT2A
DMTF1
UBE2D2
USP9X
TMEM86A
ESCO1
KLHL12
PET117
KIFC3
KAT14
PLEKHJ1
CX3CL1
NOL4L
FRA10AC1
PARL
TBC1D13
SMURF2
HNRNPUL1
HES1
SMARCD3
SLC25A32
DCAF13
LANCL2
FBXO4
GP1BB
ZFAT
TIGD2
KANK2
CRLS1
ASPSCR1
IST1
MOB1B
WTAP
SOD2
MAPK1
MIA2
TARS1
ATF3
SLC7A5
DCAF11
CTCF
TEN1
RICTOR
ACOX1
PKP4
NIPSNAP2
RNF166
CTU2
SLX1B
SLX1A
BOLA2B
BOLA2
TMEM242
ITGB1
NKD1
ATP7A
USP22
MRPL44
PHACTR4
MEMO1
MAML3
DCAF10
KMT2C
GBA
PPP5D1
NUP107
CALM3
SETD5
TMEM87B
HEATR1
SGK1
RNF220
NDUFA4
ZNFX1
NDE1
MARF1
FASTKD1
RAN
MSH3
DHFR
KMT5B
RALGDS
PICALM
H6PD
TTC3
ETV4
SFT2D2
FAM102B
GIPC1
TCF12
METTL9
SLC35E2B
ARFGAP2
RNF19A
DSTYK
SEPTIN9
PAFAH1B1
ABCC6
STX18
ID3
USP47
MIF4GD
ZNF354A
DEAF1
RDX
PLEKHA7
NAMPT
GNG5
PDCL3
MEFV
BCAP29
ZNF641
GLTPD2
RNF139
CEP135
CRKL
ADGRG3
FGFR4
AFF4
CDKN2AIP
AHCY
ZBTB40
YTHDF1
NDUFS7
ARSB
ABLIM1
IMPDH2
SNX18
FKBP9
KIAA0232
ZC2HC1C
TCTEX1D4
PHF3
ACYP1
TRIOBP
UBN2
NAT8
GTDC1
NUDCD3
SLC1A4
TEAD4
LAPTM5
TIPARP
MAT2A
PRC1
GAB1
CDK5RAP2
PIGP
ATXN2
GMEB2
RUSC2
ZNF451
SGK3
RFT1
RBMS1
P4HA1
PXT1
PPCDC
KCTD20
UNKL
TMEM51
TOE1
SUN2
MUTYH
OXR1
NCOA4
C7orf26
CDKN2AIPNL
DTD2
PRR5
ATP5MPL
GPT2
SOWAHC
SEPTIN10
ZNF76
TMBIM6
MYADM
TENT4A
CABIN1
FAM3C
ILKAP
SP3
BTBD19
UBAC1
S100A2
NOM1
KPNA7
EBAG9
TLK1
WDR62
THAP8
TPM1
SLBP
VPS26C
SYDE2
CLPX
BCR
EPS15
OPN3
CHML
STAT1
AGO2
PURA
SMAD3
C16orf87
LSM2
PPP1R12B
SRD5A3
THAP12
GVQW3
CLCF1
SFSWAP
AFG3L2
DVL3
SERTAD2
COX20
VDAC1
SIL1
GSE1
RRAS
NDRG2
NAGK
SH3BP4
REEP5
HEXB
SLC25A10
CAPRIN2
BOLA2-SMG1P6
BOD1L1
ZNF48
POLE3
C9orf43
KLF4
CYP20A1
STAT3
TADA2A
PPP1CB
NOL7
LARP1
LMO7
PPP1R13B
ARID1A
DST
HDDC2
GFI1B
FOXK2
MCUR1
LDLR
PIGO
DYRK3
ACOX3
RRAGC
ZER1
CHIC2
MAPK6
KIAA1586
PRELID3A
DONSON
DNAJB1
IFRD2
OSMR
PRRT1B
PHTF1
ZNF713
POMZP3
COQ2
SRSF6
MAMSTR
USP31
SEC14L1
NLE1
ESYT2
NRSN2
MDM2
DDIT4
CARNMT1