ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100386 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX10104974: 5637

◢ SRX10104975: 5637

◣ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX10475073: Hep G2

◢ SRX10475074: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX5457233: Liver

◢ SRX5457234: Liver

◢ SRX5457467: Liver

◢ SRX5457468: Liver

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX4671294: NAMEC8

◢ SRX4671295: NAMEC8

◢ SRX4671296: NAMEC8

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX4671309: SUM 159PT

◢ SRX4671310: SUM 159PT

◢ SRX4671311: SUM 159PT

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L8
RGPD1
RGPD2
MTRNR2L9
WDR74
DYNLL1
EMILIN2
MTRNR2L10
H4C14
H4C12
H4C15
NGB
SCRIB
MTRNR2L6
MTRNR2L1
ZC3H10
RPL41
H2BC4
H2AC6
WASHC2A
MAMDC2
WASHC2C
LOC112694756
LAMP1
H4C11
H4C3
H1-6
C1orf198
SCML1
PAFAH2
POLDIP3
SIRT4
POLR2J3
PCNA
SKIDA1
TMEM107
MUC3A
FRA10AC1
HSPE1-MOB4
HSPE1
HSPD1
TRMT2A
RANBP1
GBA
MTF2
CASQ1
H4C4
IPO4
TEX9
RFX7
DNAJB4
SLC20A1
ATR
H4C8
SCGB1C2
SCGB1C1
AMDHD2
IRF9
TRIM48
INTS12
GSTCD
PHF23
DVL2
NCBP3
GSPT1
CALM1
TAP2
SCNM1
LYSMD1
NUF2
DAB1
OMA1
YIPF2
TIMM29
CASP8AP2
H4C9
TSR3
GNPTG
KRTAP21-2
KDM3B
TMEM216
LRRC37A3
CDKN2AIPNL
H3C15
H3C14
H2AC19
H2AC18
SLC9A1
MTERF1
ARMC7
MTRNR2L3
VPS33A
MDM2
POR
PIM1
VPS13D
AFF3
DRAP1
C11orf68
DPY19L4
NOTCH2NLC
PTEN
KLLN
NOTCH2
RHOT2
PMF1-BGLAP
PMF1
RBIS
COMMD9
ZCCHC4
ZSCAN30
GORASP2
NPAS4
GTF3C3
BNIP1
LRFN3
DENR
HS1BP3
TOR1AIP2
TOR1AIP1
RPS7
VOPP1
TDRD7
NOLC1
CCNC
ZMPSTE24
RRM1
NCF4
GNAI2
NME1
BBC3
ASB2
ADNP
HEXA
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
JUND
PRND
CLCN7
NUP54
SF3A3
MPDU1
LOC100996842
CD68
SLC35B1
MRPS23
AURKAIP1
TBL3
H4C2
H3C2
MAP1LC3B2
EXD1
CHP1
BCL3
STX16
LIME1
COMMD2
PLEKHM3
TSN
POLR3B
DDX1
MARCHF8
ACTR10
ZNF507
LRRC59
CTNNB1
TVP23B
COMMD4
TCTN3
SLC39A13
AKAP11
ABCA3
SLC38A7
CSPP1
COPS5
NDUFS7
MED23
MRPL44
SSBP1
STAM2
RPL38
FOXJ3
DHX33
PDE11A
RBM45
ALG10B
MRPS18C
HELQ
PTPN6
C12orf57
ARMH3
BAIAP2
SLC25A51
ATP5MC2
CDK5RAP1
BHLHE23
UBXN6
RABL2B
DENND4A
HASPIN
OR2L13
OR2AJ1
STX18
CACTIN
ERVH48-1
RBM28
PSMD3
ZNF25
POLR2J
NDUFA4L2
N4BP3
SMARCD2
STAT3
H2AJ
H4-16
LSM11
POLD3
ATP6V0D1
AGRP
GRAMD1C
NAGPA
DUX4
RBBP5
RABL2A
PRRG2
NOSIP
DGKZ
TLR5
BCL2
RHOF
XKR7
FAM227B
DTWD1
INTS1
TMEM147
STK17A
CSNK1D
RDH5
BLOC1S1
ITGA7
DSTYK
GTF2H2
CAB39
GRM4
SNX16
SHISA5
WASHC5
NSMCE2
RPL10A
NSUN4
SCAND1
POLG
EIF3F
NCAPH2
LMF2
ATG101
MRPL24
NUTM1
NOP10
TRAPPC3
DCK
TAF3
NOXA1
IQCG
RPL35A
MAPK8IP3
UGT8
TATDN3
NSL1
COPS7B
PDE6D
PHB2
NUP205
NOTCH2NLB
NOTCH2NLA
DCP1B
RPL21
CYP1B1
ZBTB45
DIAPH1
TTC8
TMEM242
ACTRT3
R3HCC1
MYNN
GLIPR1L2
CDC37
CERS2
ACBD4
PLCD3
ANXA9
SRRM3
GALK2
COPS2
TMEM115
TM9SF1
MLEC
RBM39
SPATA25
CTSA
NEURL2
ZNF341
UNK
SMPD4
MZT2B
COX16
SH3GL1
CHAF1A
TRAPPC8
BPTF
FFAR1
B4GALT7
SNX18
IER3
FLOT1
RBM17
RAF1
UBQLN4
LAMTOR2
MED27
DCAF10
TBC1D19
RWDD1
SLC17A7
PPP6R1
GABPA
ATP5PF
MCOLN1
FRG1
RPS20
TIPIN
GANAB
IPO13
VPS50
HEPACAM2
LPCAT3
MRPS31
STOML1
TOR2A
PML
APC2
USP3
PNKD
HGFAC
JRK
ILF2
SNAPC5
AAMP
COL9A2
H3C12
H2BC17
H2AC17
DCP1A
INO80C
RABGGTA
TMEM127
CIAO1
PLEK
HMGN2
CCDC200
PXK
MRPL1
FBXO28
TSNAX
PSMF1
STAT1
SRRT
CENPS-CORT
CENPS
ARHGEF12
PEX3
ADAT2
ARSG
STK16
GLB1L
PSMC3IP
EIF2D
PCID2
CUL4A
RAD54L
VTA1
NMBR
AP5B1
TSFM
WDFY1
RAD23A
SLC35E2B
FASTKD1
RSAD1
SKP2
LMBRD2
KAT5
UNC45B
ACTL10
ATG16L1
TOX4
RAB2B
INKA2
MEF2A
DDX20
FBXO5
C8G
FBXW5
LARP1
SLC39A3
KRR1
PPIF
TUBA1B
FIBP
CTSW
NRTN
SELENOH
NFAT5
PSMG3
IL21R
RBSN
USP30
ATAD5
VPS29
RAD9B
APOBEC3B
PRKDC
MCM4
TCHP
ZFYVE26
RAD51B
LZTFL1
NMUR1
AHCY
TPD52
TOMM22
SLC2A4
SLBP
PRDM1
DPP9
SLC33A1
TOP3B
PRKCE
EIF1B
PRDX1
ZNF518A
BBS1
NUDT17
SPATC1L
SNAP47
JMJD4
ZFYVE1
NR1H3
DHX8
TUBB
ACP2
DCLRE1B
AP4B1
SPNS1
ADAR
SEC13
GNB2
RNPS1
H2BC8
H2AC8
RPGR
RPL27
FAM228B
TAOK3
SF3B6
SUDS3
MOB4
ANKRD46
SRSF7
ROM1
EML3
SART1
PAXBP1
MAZ
NCBP2AS2
NCBP2
FAM111A
MAD1L1
NUDT1
MRM2
CCR1
E2F3
ZBTB40
PNPT1
TMA16
RTTN
SLMAP
SAAL1
ZER1
CDK11B
CDK11A
ACTR3
ZNF3
UTP3
NDUFS3
KBTBD4
SNRPB
NBN
C18orf25
KMT2C
TRIM32
ASTN2
U2AF2
TRIM41
LUC7L2
LTF
PDE4A
CDKN1A
SLC24A1
ERCC5
ZBTB4
SLC35G6
POLR2A
CIPC
ZDHHC4
IFRD2
BROX
AIDA
CNOT6
TGFB1
DERL3
KANSL3
FER1L5
MYEOV
PCBP2
LSP1
KLHL20
CREM
TNFRSF21
TUT1
MRPL58
H2BC11
H2AC11
TMSB4X
ENOSF1
RMND1
ARMT1
SMG6
NAPA
SGCA
C8orf76
SMIM29
ARL14EP
TRIP4
GET4
WBP1
INO80B
TSSC4
DHRS13
MCM3
ZFAT
RGL2
RNASEH2C
CCNL1
VPS45
POLR2J2
PPIP5K2
U2SURP
ATF3
SNX3
RETSAT
ELMOD3
EDC4
COMMD1
FAM207A
MMACHC
CCT4
GPR68
ZNF148
RUVBL1
EEFSEC
KLHL12
NUP153
TIA1
POLR2C
USPL1
HMGB1
KMT2E
FTH1
ATAD1
TIPARP
KIF21A
MRPL53
MARCHF7
PAK1IP1
C6orf52
METTL7A
MED15
TMEM230
KAT6A
POLR3E
PTK6
NDUFA6
FLT3LG
PRMT5
NPAT
ATM
UBE3D
DOP1A
FMNL3
CARM1
TXNIP
SNRPE
MFSD4B
GADD45B
SSNA1
ANAPC2
TSHR
ARID2
TMEM41A
PRR14
NFKB2
TMPO
MPEG1
PHF13
C8orf58
CCAR2
SLC43A3
CCDC43
ATP7A
C19orf48
TOR1A
SLC35A3
CCND3
TAF8
NSFL1C
FAM187A
H2BC5
H1-4
NAPG
EFTUD2
CCDC103
SCAF11
GFI1B
TSC1
TNFAIP3
DNAJC9
PES1
FAM104A
C17orf80
RARA
MAT2A
PRMT3
RCBTB2
PBLD
HNRNPH3
C7orf26
BCL9L
EEF1A1
AGK
VARS1
MAPK1IP1L
H1-2
TAF6
CNPY4
TMEM101
RWDD3
ZNF784
TEKT2
ADPRS
FAM104B
FARSB
DCXR
NXF1
KIF15
KIAA1143
IL2RB
MRPL38
THOC1
BUB1B
RMDN3
ARHGAP22
ZNF740
CSAD
CARS2
SNAI3
WDR11
FARS2
LYRM4
INTS7
DTL
NOL11
RAD52
C1orf159
AP2M1
MRM3
GLOD4
SREBF1
CPT1A
SQSTM1
ANGPTL4
DHRS3
ARID3B
ZNF367
CYP26A1
NUDT15
RGS3
SLC25A20
REXO4
ADAMTS13
DBP
ETFB
SLC45A4
DLG4
ACADVL
BCAR1
MYLIP
SOAT2
NRL
ZMYND8
TMCO6
FBXO46
SLC6A12
ABCC10
RARB
ZDHHC19
SLC51A
ARNT
RXRA
TBP
PSMB1
WDFY2
IGFBP6
C3
PDE12
TGM2
TAGLN2
TNPO3
CALML3
AJUBA
DOT1L
USP32
NEDD4L
ACACA
SERPINE1
PEMT
BCKDK
ABCA1
CSF3R
DCAF11
SYNPO
TRPM1
ECH1
LOC102724265
ZGPAT
ARFRP1
ACSL3
CCDC174
FETUB
RALGDS
CDK3
TINAGL1
TRIM25
SEPTIN9
ZFAND2A
DONSON
SERINC2
ARFGEF2
LOC100509620
AIFM2
PCK2
DENND4B
SLC51B
RBFOX2
ADRB3
SH2B1
SH3BP4
ERCC1
NR1I3
BHLHE40
ADAM17
PLEC
NFKBIA
GBE1
AKNA
UPK3B
CD244
ANKRD28
MIDEAS
FRG2C
ETFA
ABCB11
ETFDH
C4orf46
TRIB1
FRMPD1
PSPN
ALKBH7
CLDN6
SPAG8
HINT2
MBL2
ACSL1
FASN
TRIM55
C11orf86
TNFRSF1B
LCMT1
ZBTB7B
VGLL4
CDC42BPG
NDRG2
APOC1
KANK1
AKAP1
MLLT3
MPV17L
PLEKHA7
LMNA
UGT1A1
CDCA7L
IBTK
ITGB2
ANXA6
HNRNPUL1
ARL8A
CLCN1
CFB
TSKS
AP2A1
ATP2B2
EIF4G3
PLXNB2
FST
PLIN1
ZPR1
APOA5
VWA1
MT2A
SLC19A3
SRCAP
LOC730183
PTMS
MAMSTR
COQ10A
TP53I3
MLXIPL
SDCBP2
LAG3
HMCN2
PTPN4
NEK4
UROS
BCCIP
TMEM171
LBX2
AGT
FURIN
FOXO3
CCNL2
TP53INP2
NPPA
SPAAR
C2orf49
SIRT5
KLF9
PPME1
C2CD3
PPP6R3
PNPLA2
RRM2
ADGRG3
RRN3
CEBPB
SPEGNB
GMPPA
LDLRAD1
SH3YL1
ACP1
TCIRG1
RNF111
AKT2
B9D1
PIKFYVE
IL6ST
AVP
ANXA2
OXA1L
PHC2
SOCS2
ALDOC
TACO1
KLF10
SMAD3
HERC5
PGLYRP4
LTBR
TIGD2
SH3D19
SMPDL3A
CLDN23
FGF19
ACYP1
DNAJB3
PIEZO1
PPIL2
RB1CC1
IQGAP2
SLC25A47
UBR4
CAT
CCDC38
AMDHD1
OTUD7B
ELANE
CBS
HIVEP2
KMT5A
HRCT1
ARSB
SECTM1
MIDN
RASD2
KRT8
RBMS1
AOPEP
PACSIN3
SEC14L2
SYS1
SCAF1
RRAS
RBKS
BABAM2
DAGLB
MAPRE3
ACAA2
GPC6
IL1R1
HSD17B4
SLC17A4
VASN
SERPINC1
OGFOD2
ITIH1
A1BG
SPG7
NINJ2
IRF2BPL
GALT
NAA38
PCGF1
TNS1
LDLR
TXNDC5
RNF207
TTC39C
TMEM182
NOL12
EGLN2
NCOA4
EFCAB12
TLCD4
EPS8L2
DEAF1
SCNN1A
SCAP
ZC2HC1C
MOV10L1
HPCAL1
CCL20
MLLT11
CHD3
SIRT1
NBPF1
GFOD1
ASAP3
APEH
RNF103-CHMP3
RMND5A
RAC1
LRP5L
TECPR1
LOC644090
F2
PTPRF
SPRED2
JAK1
SLC2A4RG
NFE2L2
NFE2
NUDC
EFNA1
ASPG
TLCD4-RWDD3
ZNF30
ACOX2
SRP14
RBAK-RBAKDN
RBAK
TTC30A
TANK
MST1L
TTI2
PEPD