ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671311 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX10104974: 5637

◢ SRX10104975: 5637

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX10475073: Hep G2

◢ SRX10475074: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX5457233: Liver

◢ SRX5457234: Liver

◢ SRX5457467: Liver

◢ SRX5457468: Liver

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX4671294: NAMEC8

◢ SRX4671295: NAMEC8

◢ SRX4671296: NAMEC8

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX4671309: SUM 159PT

◢ SRX4671310: SUM 159PT

◣ SRX4671311: SUM 159PT

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

ARHGEF1
DUX4
FRG2C
WDR74
SRRM3
MRPL12
TUBB
MDC1
STAT6
ZCCHC4
DHRS3
MTRNR2L1
SNX16
SH2B1
FRG2
SSRP1
P2RX3
SOCS2
TEX46
KDM1A
ANGPTL4
CASC3
TIMM10
ARID3B
ATG101
TRIM41
CDKN2AIPNL
RRP8
ILK
TBL1X
LRRC59
NFKBIA
PCBP2
PHLDB2
COPS4
IER3
FLOT1
FAM83E
SPHK2
RPL18
PPL
NFE2L2
PXK
LTBR
SCNN1A
COX7A2
LRRC47
ABCG1
LPCAT3
GOT2
CCL20
NUP50
TRIB3
SOAT2
IGFBP6
METTL18
C1orf112
UBXN6
ARL14EP
ZNF202
DUSP1
EPB41
ABCA1
NLE1
BRIX1
ZNF23
ERCC1
COL23A1
CPT1A
RAPGEF3
TRIB1
SHF
ZMYND8
TBPL1
KNL1
MYEOV
POLR1H
TRIM55
SNRPE
SQSTM1
NCBP3
RPS3A
JRK
KRT6A
GSTA4
DDIT4
UBE2Z
SCYL3
KLF9
MUC3A
ZNF148
MXD4
TEKT2
ADPRS
ARID5B
PRICKLE4
FRS3
STX16
ITPRIP
AMTN
ZSCAN30
PSCA
RPS29
STX18
OR2T1
EIF3G
CSRNP1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PDE11A
ATP5MC2
RBM45
RINT1
BCL3
FTH1
NYX
PARL
ANP32E
TPCN1
SNAI2
SPSB1
CPEB3
PFDN5
MYG1
STRA6
MACC1
R3HCC1
ZSCAN9
ACACA
ARHGAP24
HES1
LIME1
SLC2A4RG
NFE2
SLC38A1
POLR3E
TOLLIP
C3
EEF1AKMT2
KLF7
FAM98B
ECH1
ZSCAN25
AJUBA
B4GAT1
BRMS1
ATP6V1B2
CCDC107
TRAF6
RAG1
TRIM52
MRPL34
ABHD8
DDA1
TPRA1
GFM1
PRPSAP1
RBFOX2
TP53I3
NOP53
CAT
OLFML3
SIAH1
SLC49A3
SNRPD1
SYS1
MUC5AC
NKIRAS2
DNAJC7
GYPC
ACSL1
PIGO
NEK4
RPL37
PRADC1
CCT7
KLF10
METAP2
SPIDR
F2RL3
CDCA7L
TBCCD1
DNAJB11
H4C8
NFIL3
CCDC88B
SREBF1
OTOS
COPS9
SERPINE1
MDP1
CHMP4A
MIDEAS
TLN1
CREB3
RPL10
RPL36
EGFR
SLC25A20
SF3A3
MRPS15
THOC1
DUSP12
SAA1
C17orf75
GGA1
MNAT1
OR1J4
UBE2J2
ATF3
RPS7
NDUFS7
TES
CYTH3
TMEM267
FBXO31
TXNRD1
ART4
RRN3
BCAR3
ZNF394
ZKSCAN5
DTNA
ADGRF5
IL31RA
SNX18
INHBE
TKFC
DDB1
FNTA
POLR2C
RFFL
GBE1
PTPN2
CNOT8
ELANE
HDLBP
SEPTIN2
DAGLB
CDIPT
NDUFB7
TBC1D16
ZSCAN12
ZNF696
FRA10AC1
COTL1
MRPS33
PCOTH
MIPEP
TANK
CBWD5
CBWD3
FBXO4
NECAP2
OXSR1
CETP
YARS1
S100PBP
IL6ST
ZNF3
INTS4
NUTM2E
CXorf38
ARL8B
PCGF2
PSMB3
SLC9A1
ANKRD46
SAMSN1
DBI
C2orf76
ACAA2
TOB2
SH3GL1
CHAF1A
ETFDH
C4orf46
GTF2H2C_2
GTF2H2C
RBM25
TOP3B
SMIM14
DET1
C8orf37
UCHL5
RO60
CEP120
PSMA3
C7orf65
ELFN2
TM4SF19
CDC42EP4
MYC
ZNF598
H4C14
USP3
MTERF4
LOC100509620
NR1H3
PCNP
CHPF2
KANSL3
FER1L5
HAL
TTC5
POFUT2
CSF1
ZNF35
CCNL1
ERCC6L2
CXCL2
TAB1
RNF207
PHKA1
HOXA3
RHOT2
MAP1LC3B2
ACSL3
AFAP1
LOC389199
PECAM1
ZNF385B
BDKRB1
MAPRE3
SERPINB8
CLK3
MRPS31
SLFN5
ZNF367
ZFP36
ATP5MPL
MEGF8
RAET1G
TAGLN2
H4C15
CLUAP1
C16orf90
TUFM
ETFB
CLDND2
OSMR
GTF2H2
IL1R1
COMMD2
ZNF641
GADD45A
HSPA5
HMGN4
SLC22A15
TMEM242
PLIN3
HIBCH
IL6R
HTR5A
TSTD2
NCBP1
ZNF497
FAM107B
PFKP
AARS2
ZSCAN22
TGIF1
PPARG
MALT1
SRP68
GALR2
CCDC200
PNPLA2
SELENOH
TMCO6
DPY19L4
FEM1B
ZNF787
RABGGTA
FTL
ITPKC
COQ8B
GOSR1
PRPF18
WDR70
MRPS23
MEF2C
UQCC3
LBHD1
PRR5L
C1QTNF1
AMN1
MRPL40
HIRA
PTPN4
MRPL44
NDUFS4
WDR25
WARS1
CACYBP
TFB2M
CNST
LRRFIP1
MAP4
TAMM41
CDK11B
CDK11A
PLEKHM3
ZNF827
ZNF195
MCRIP2
CDK5RAP1
CIPC
METTL26
SACM1L
ARMC12
FKBP5
RPS27L
FAM133B
RARS1
FZD2
CEP295NL
ZKSCAN8
PSMA1
HSPA6
POLQ
TIA1
DIDO1
TOMM22
H4C12
ATXN7L2
C1RL
INTS12
GSTCD
MRPL21
IGHMBP2
RSF1
AAMDC
WIZ
GALM
AURKAIP1
ISL2
DHX8
EXOSC8
ALG5
NPIPB9
CYHR1
KIFC2
RHBDF1
MPG
MTF2
LNPEP
IL1RAP
PPIB
ABCC10
ARNT
BHLHE40
KRT8
FEM1C
SOAT1
TUBGCP3
PGBD2
MYLIP
GPC1
AAR2
IRF2BP2
VPS4A
COA1
MRNIP
CDKN1C
DNAJC11
SLC44A1
TBC1D19
ZNF19
RAD23B
PLEC
PIP5K1A
ARHGAP22
RIN2
FAT4
DDX18
METTL15
KIF18A
RPS14
SMARCD1
TSKS
AP2A1
CDKN1A
USPL1
HMGB1
DSTYK
MTHFD2L
IQSEC3
MEIS2
ATP5IF1
NUF2
CAMK2D
FZD1
PPP2CB
C18orf63
LOC100129484
SH3TC1
NABP1
C18orf25
TNRC18
PCBP3
SLCO2A1
NSMCE4A
PDE4D
BORCS6
MTIF2
SMIM3
ERI1
PPP1R15A
TRIM7
SUGT1
UBC
HIF3A
SLC35A1
ZSCAN23
FAM184A
PLD1
GTF3C3
SGPP1
CABIN1
ZNF789
RPL27
GBA
MYBPC3
IFI35
ZKSCAN1
PRICKLE2
ZNF395
MRPS10
SREK1
ADNP
LDLR
ZBTB45
RAPGEF2
ZKSCAN4
WNT9A
HINT3
SMAP2
PARN
BFAR
DDB2
OCLN
ZNF496
TMEM259
CNN2
SPIRE1
MTRES1
MDM4
DBP
TNFRSF1B
FAM227B
DTWD1
GIP
GABPA
ATP5PF
TFAP4
ABCC3
MFF
NOL7
POLR2J3
XAF1
CXCR5
PIWIL2
ROS1
DPP9
LPIN2
SEC13
RSU1
IARS1
GPN1
CCDC121
BEST1
ZNF852
FASN
NME1
TOMM5
ZNF768
VSNL1
ZNF391
ZNF577
SMAD3
SLC24A1
DRAP1
C11orf68
WBP4
ELF1
RAD54L2
OPA1
EBAG9
SLC30A6
SORBS2
NDUFC2-KCTD14
NDUFC2
ZNF460
ZSCAN26
RGS20
KRT6B
NQO2
S100A2
CCND3
TAF8
ANO3
GPT2
DCP1A
TMEM184A
C8orf58
WDR36
PGRMC2
CCAR2
ZFAND3
SLC39A13
KCTD18
SLC35E2A
MFGE8
EIF1
BCL9L
TRIM65
SMARCC2
GLI4
RGPD8
RGPD5
PLXDC1
APOLD1
CYP2R1
CD36
DENND4B
SPAAR
PPP6R3
HRCT1
FOXJ3
RPL5
PRMT5
TNFRSF1A
PTPRU
TBL1XR1
CHAC1
USP17L22
USP17L20
PAN3
EBPL
F12
MRPS18C
HELQ
HARS2
HARS1
MRPL58
YBX3
PIGQ
NHLRC4
PFN3
UPP1
CTNNB1
TSHZ2
PSMD1
NR2C1
FAM200A
CREB1
FAM50B
RGS2
MEFV
ZNF843
SRI
HNRNPF
WDR7
POLG
ZNF629
BAZ2A
NDUFAB1
DYRK2
TMEM200C
TRAK2
STRADB
ATXN2L
TM4SF1
BTN3A2
MRO
EMC3
PRKCE
NFAT5
ZNF572
COA6
TAS1R1
NOL9
LOC101928764
PIK3R1
COPS7A
TCTN3
NCSTN
COPA
IDH1
ZMIZ1
ZNF740
CSAD
ELMO1
PPCDC
USP30
ALG10B
RTTN
FAM156A
FAM156B
ICE1
TRIP11
GTF3C5
CIAO3
DLX4
NUDT15
RPH3AL
PACSIN2
KMT2E
PET117
KAT14
CCN5
ABCD4
ANKRD39
DDX1
LTA4H
MAP3K8
LRRC37A3
LSG1
BDP1
L1CAM
TRIM5
TRIM22
ZNF558
UNC80
FOXD4
DCAF10
RAPGEF1
CFLAR
SMIM12
C12orf73
SAMD4B
TMEM41A
MRPL1
KLRK1
CRBN
ATP9A
SPRY4
IRX2
C5orf38
MCTP2
LOC100505841
C1orf141
MTRNR2L8
ANXA2
CAPN2
SSBP2
NUP54
SEC11A
ANKRD40
FUCA1
LONRF1
THOC3
EIF2S3
MMP7
TBP
PSMB1
ATG5
HNRNPD
SDHB
PSMD6
NPIPB6
BTG2
PRKAA1
RUFY2
TGM2
FST
ERBIN
TMCC1
SIRT4
PPP4R3B
GIPC3
ZNF621
ELMOD1
MKRN3
PDE4DIP
TEFM
HSD17B11
LUC7L2
NIP7
COG8
FMC1-LUC7L2
FMC1
GPATCH1
F2R
FGFRL1
ASS1
CLDN7
SAAL1
IGSF10
ODF3L2
GOLPH3
TRAPPC9
FBXO46
TSPAN4
POLR2L
LPP
MANEA
SPRYD4
SYNE3
SLC8A1
CHGB
ZNF197
COG2
MAML3
LY6G6F-LY6G6D
LY6G6F
ABHD16A
PLAAT2
SPOP
ANAPC11
ACCS
COL16A1
CHD1L
POLD3
LTBP3
PRKAB2
COPS8
WBP1L
INTS1
MECOM
PGBD1
ERG
RXRA
MED4
PMEPA1
HRH1
LSMEM1
FAM167A
UPK3B
NIBAN2
BOLA3
DDAH1
NOP16
HIGD2A
SEC62
YLPM1
CYP20A1
ATL1
MAP4K5
CCN1
TP63
SNX15
CSTA
FRAS1
GDPD1
ITGA6
TENM3
GFOD1
KRAS
RNASE4
ANG
POLR3B
SSH1
FAN1
USP53
ZXDC
UBE2H
HSPE1-MOB4
HSPE1
HSPD1
MRPL39
ACTRT3
CAAP1
MYNN
PYURF
PIGY
HERC3
ETS2
PARD6A
ACD
CLGN
ZSCAN16
DOT1L
MIDN
SPRED2
HBP1
H4C4
CCDC57
TRIOBP
BMS1
NSFL1C
LOC112694756
ZNF142
BCS1L
PSG4
MB
BRI3
HIF1AN
HES7
ALOXE3
TPK1
ETFA
GABRE
NRM
TRIM47
BNIP1
CIRBP
ITGB3BP
EFCAB7
MTHFD1L
PHGDH
RNF216
CTNNA3
METTL25
CCDC59
TXNDC9
EIF5B
LTF
GRPEL2
HMBS
ADCY4
ZNF517
KLHL40
PLIN1
ZBTB38
TMED5
CCDC18
AHDC1
LDHA
GPAT3
RPL37A
TMEM134
COL12A1
NPAS4
DUSP10
NOTCH2
MINPP1
SLC39A8
PLK3
INA
CPNE5
DPH7
CENPE
ZNF860
OSBPL10
CEBPB
ACYP1
ZC2HC1C
TTI2
PRELID3B
NTMT1
PHACTR4
MRPL3
PNKD
BRF2
SLC1A5
AAMP
SMN2
SMN1
H2AX
CDKN2C
MYO1F
CXXC5
SCAF8
ANPEP
INF2
ARHGEF12
PER1
INO80C
LONRF3
HIPK1
WDR97
MAF1
TMEM132A
B4GALNT1
CEP72
CLDN6
RBM19
RBSN
TMX4
TNFRSF12A
THOC6
HCFC1R1
ILF2
BRD4
GXYLT2
CERS2
ZC3H10
RPL41
ALDH3B1
CAST
APOL6
TMEM101
SRSF4
UMAD1
TMA16
NUFIP2
TBC1D4
COL7A1
ERAP1
TTC13
ARV1
PSG5
EPHA3
MAD2L2
LPIN1
KCNAB2
ISG20