ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671294 | NAMEC8
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX10104974: 5637

◢ SRX10104975: 5637

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX10475073: Hep G2

◢ SRX10475074: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX5457233: Liver

◢ SRX5457234: Liver

◢ SRX5457467: Liver

◢ SRX5457468: Liver

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◣ SRX4671294: NAMEC8

◢ SRX4671295: NAMEC8

◢ SRX4671296: NAMEC8

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX4671309: SUM 159PT

◢ SRX4671310: SUM 159PT

◢ SRX4671311: SUM 159PT

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

WDR74
ITGB2
ZGPAT
ARFRP1
TGM2
BIN1
ERCC1
SOAT2
IGFBP6
ARID3B
ABCC10
MIDEAS
PHC2
LAMA5
SH2B1
USP2
DPP9
PHLDB2
STX16
IER3
FLOT1
TINAGL1
TRIB1
LTBP3
PSCA
GPR39
MUC5AC
TTC39C
RXRA
VGLL4
PIP5K1A
MICALCL
DUX4
FBXO46
GPC1
APOL6
NAA38
CHD3
HIF3A
SREBF1
PFKP
SMAD3
ANGPTL4
PDE12
FHL2
TSPAN4
POLR2L
CETP
SKIL
ZNF367
TMEM40
MYEOV
SMIM14
DHRS3
MFSD10
AFAP1
LOC389199
RIN1
STX1A
ITGA5
TANK
PECAM1
SMIM29
DOT1L
TCTEX1D4
BTBD19
DUSP1
FGB
RGS3
ANKRD2
GPRC5A
LAPTM5
PCGF2
PSMB3
PLEKHA7
SBNO2
ERCC6L2
SEPTIN9
SPATA25
CTSA
NEURL2
MTRNR2L1
ABCA1
TTI2
SEC22B
LPCAT3
S100A2
ACYP1
ZC2HC1C
LOC100509620
MXD4
GIP
SNX16
NIBAN2
SLC45A4
TP53I3
LY6K
SERPINE1
CCL20
CDC42EP1
NFKBIA
PHYHIP
DBP
C11orf86
SQSTM1
ABHD2
ITPRIP
TAGLN2
RNF208
CYSRT1
RNF224
CDCA7L
CCDC88B
IL34
UBC
BGLAP
ACSL1
LTBR
SCNN1A
FRG2C
SLC22A18
ZBTB38
PKM
JAG1
LEKR1
DUSP10
C1QTNF1
SH3BP4
CD14
TBC1D16
RALGDS
TMEM107
GGT5
TBP
PSMB1
PHKA1
ZMYND8
ASB2
MEAK7
NDST1
WNT9A
CCDC107
RIOK3
MYLIP
S100A6
CDK5RAP1
GFOD1
RBKS
BABAM2
KNL1
TUBB
MDC1
CCND3
TAF8
STX18
KLRC3
SYS1
SLC25A35
COL7A1
NFE2L2
HES5
NRM
PPP1R18
GALE
NADK
DLG4
ACADVL
ANKK1
ARHGAP22
CPT1A
ALDH3A1
C3
FRG2
KAT6B
KCNMA1
SLC41A3
ACTN1
CSRNP1
CXCR5
METTL7B
ZFP36
MT2A
POLDIP3
NDUFS7
RBM7
C11orf71
JPH2
CPA4
TRIM55
C19orf33
VASN
BCL3
PC
SSRP1
P2RX3
ELANE
UPP1
LRRC59
ARIH2
FOSL1
JRK
TNXB
GYPC
FGF1
CD63
ABCG1
RPS29
MMP19
NQO1
CHMP4B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SHF
SOCS2
ARHGEF1
DLC1
SAR1B
IL20RB
SMIM3
PRR7
NEDD4L
TECPR1
MYBL2
IRF2BPL
NUF2
GSTA4
MRPL12
COL16A1
STAT6
MAP2K3
PPL
LDLR
TBL1X
METTL27
NUBP1
PLIN3
AZIN1
TEX46
KDM1A
ATP13A2
GABARAPL1
PMPCB
ZFAND3
KLF10
MINDY2
LTBP1
ORAI3
FRA10AC1
AJUBA
HIVEP2
CCDC200
NRP1
ITGA3
RAPGEF3
CLCN3
GBE1
KPNA7
PIKFYVE
SPRED2
H4C12
NRCAM
SLC12A4
RFFL
PRELID3B
JUNB
PEAR1
NT5DC3
POLD4
LIPK
DONSON
TFAP2A
SPAAR
HRCT1
TMEM184A
SNX8
CCDC57
KANK4
TMEM259
CNN2
HNRNPD
STX10
IER2
IST1
OTUD7B
MKNK2
NFIL3
BLCAP
SLC1A5
TNFRSF6B
USP3
RIF1
KLHL30
TPCN1
PARL
REXO4
ADAMTS13
ANXA2
RARA
XIRP2
H4C14
H4C15
C5AR1
KMT5A
BORCS6
TIGD2
RARG
CHODL
HSPA5
GATD3B
GATD3A
FADS3
PLAC9
ARL14EP
MTERF4
FTH1
CAPNS1
HES1
GABRE
IQUB
APOBEC3H
UHRF1
PLAU
CREB3L2
GNAL
UBXN6
PLXNB2
ARID2
PADI3
GDF5
IP6K3
RDH11
RDH12
MACC1
PKP1
TCEA2
GBA
DENND4A
GPX4
HPCAL1
MAP3K9
CGB5
CGB1
RICTOR
CCN5
ENAH
MAST2
ANK1
CDCA4
SF3A3
COX7A2
MXRA8
C1orf100
TGFBR2
ADAM17
IL6ST
MDM2
BCAS4
AAR2
PDE4D
MLLT3
ZHX3
DPP4
SYT12
CAST
DET1
LAMB3
ALDH3B1
PCBP2
PAFAH2
ANXA11
INA
MTRNR2L2
MSH3
DHFR
BCKDK
EPM2A
TMEM41B
ZSCAN25
NOP53
SH3GL1
CHAF1A
NUDT15
DDIT4
RAB3D
TMEM205
CCDC159
GALNT7
MRPL34
ABHD8
DDA1
BCAR1
AMOTL2
DR1
UPK3B
DMAP1
LIMK1
OGFOD2
NYX
USPL1
HMGB1
SNX33
ACACA
FAM227B
DTWD1
S100A16
PCNA
CDS2
BCL9L
CLCF1
TMEM242
FOXK1
FAM184A
DNAJC16
CASP9
ZNF827
SOGA1
HBP1
LPIN1
PIK3R1
SEMA3B
TCF7
GMEB2
DCAF10
LRRC47
ARMC12
FKBP5
TXN
SHLD2
GLUD1
STK40
RTF2
LRRC57
HAUS2
NCBP3
PAX8
SLC4A2
CDK5
TMEM9
DRAP1
C11orf68
TVP23B
ROS1
CDC42BPG
TOB2
ZC3H12A
RBFOX2
KBTBD7
CNOT2
STARD4
ITGB3BP
EFCAB7
STRA6
NOL4L
HIGD1A
ANKRD1
C2CD2
RTN4
SACM1L
KMT2E
ODC1
KANSL3
FER1L5
ATP5MC3
BCL2L1
RAB30
DTNB
DMPK
RPL37
OSER1
ELOVL6
CDKN2AIPNL
CST6
SLC44A1
TBC1D19
ECH1
TEAD3
FAM187A
MTF2
PLXDC1
SH3TC1
TM4SF19
LMNA
MYC
SSH1
FAAP20
RTEL1
STMN3
SPATA1
GNG5
AXL
SLC9A8
TUBB3
MC1R
ABCC3
CCN2
RRP8
ILK
RFC4
CIRBP
JAGN1
TEFM
PRICKLE4
FRS3
TRIM47
ZBTB43
HAS1
LOC102724265
ACAA2
BCAR3
ITPKC
COQ8B
C15orf62
SELENOH
ANXA5
ZMYM1
TAF1A
TSKS
AP2A1
TENT5B
TOMM5
FIG4
AK9
C17orf75
HRH1
ZNF148
ATF3
CAPN2
CARD19
FURIN
CASC3
EEF1AKMT2
FAP
SLC20A1
NLE1
PRELID3A
HSPB7
FLYWCH2
SLC9A1
ZNF142
BCS1L
HCAR3
PLEC
PNPLA2
PRMT5
ZSCAN22
CDH24
HOXA3
SDCBP2
WDR90
MCRIP2
PER1
MYH9
KRBA2
SCAP
PTPRH
HEXB
KLRK1
SLC25A20
PCYT2
CRABP2
SLC25A45
FRMD8
ACOT7
AHI1
ELFN2
NDUFC2-KCTD14
NDUFC2
FAM83A
KRT7
TRIM52
PLEKHN1
LPAR1
WDFY2
ACSL3
CLDN6
NDUFS3
KBTBD4
TNFRSF12A
THOC6
HCFC1R1
NDUFA12
HMGN4
EPHB6
MRPS31
RAD54L2
OSMR
UCHL5
RO60
DOK7
ITGB7
SCAF1
RRAS
FOXP1
PALM2AKAP2
TRIOBP
TMEM120B
DENND4B
FABP3
MMP2
METRNL
OXA1L
PNPLA3
ZSWIM8
CHCHD1
BOLA3
KCNAB2
N4BP2
THY1
PTPN1
RP1L1
SRRM3
ANKRD46
LRRC37A3
BNC1
LYPLA2
LSP1
BHLHE40
SRCAP
LOC730183
MBD6
DDIT3
CPPED1
RELT
TENM2
ZMPSTE24
RPH3AL
SMG6
DTNA
CEBPB
DVL1
FOXS1
KLF9
VIM
INTS12
GSTCD
VWA7
MIEF1
C1QL1
MUC3A
ELP5
CTDNEP1
MNAT1
HNRNPA1L2
CD248
UPF3A
NOCT
PDLIM7
DAGLB
OPA1
SH3PXD2A
COPS7B
PDE6D
FAT4
PPP6R3
COMMD2
NUAK2
RPS7
POLG
CDV3
CLMP
ATP5MC2
H4C11
POLD3
METTL9
KRT6A
SCOC
SAXO2
EFL1
DUSP23
NCOA5
ABL1
PARP2
DUSP6
POLR3E
SLC22A4
SLC38A2
CYB5R4
GADD45A
CLK2
GATAD2A
CLSTN1
SCARB1
RPS3A
TPRA1
MRPL21
IGHMBP2
AVPI1
RNF145
CFLAR
SSBP2
NIPAL4
ACTN4
H4C3
H1-6
TTC7A
MCFD2
MTRNR2L8
KRT8
VPS4A
FAM13A
DCK
ISG20
USP31
TP53INP2
ARL4A
PRKAG2
MRPS15
MRPL40
HIRA
EGLN1
ZCCHC4
GTF2H2
PRMT9
CMTM3
INF2
WDR36
ALDOA
TIMP3
LRP5L
ZSCAN30
SCN11A
WDR48
SEC13
TARS1
ARID5B
POMP
ADNP
GPATCH8
CSTF1
AURKA
NME1
GOT2
ASS1
TRIP4
ATP5MPL
GEM
PLAUR
MRM1
H4C2
H3C2
TACO1
TBPL1
TATDN3
NSL1
MRPL44
GTF3C3
USP30
CSF3
ETS1
H2AC4
TSPAN16
FBXO32
RABGGTA
CXCL8
THBS1
RASD2
DNAJB1
DUS1L
RBM27
TRDMT1
ANTXR2
TXNRD1
ZNF212
AGXT2
ZC3H10
RPL41
RPLP1
IRF2BP2
ZNF740
CSAD
TMEM222
RHOC
DNAJC11
EIF2D
ASAP1
TMEM92
NUP107
UBE2T
IARS1
SLC24A1
RNF139
BEST2
CCNL1
PLIN4
CTNNB1
PTPN6
C12orf57
GPCPD1
CDIPT
KLF7
SCFD1
CADM3
TMCO6
CD151
SORBS2
CYTH3
TKT
MAMDC2
RAB11A
UNKL
STARD5
NCOR1
PCSK9
PIGL
PTPRE
HINT3
TAF9
RAD17
AK6
SIRT4
RCN1
TNNI2
NFX1
STOM
MRPS14
R3HCC1
CD82
ETFA
TLN1
CREB3
FXR1
PGRMC2
DDX1
TBC1D4
NANS
F2R
NOL7
UBP1
STOML2
ZNFX1
SH3BGRL3
ST3GAL2
SDCCAG8
CEP170
SPATC1
RIN2
TOE1
MUTYH
ANXA8
PLOD1
AHCY
EPB41
GOLGA1
ZFP36L1
ARHGEF2
KANK2
PRPH2
FBXO31
CHD9
FAM83E
EBAG9
SPHK2
RPL18
TUBGCP3
GRB7
ITGB1
CHIC2
H4C8
MID1IP1
UTRN
TOMM22
SNRPE
PLEKHG4
PALLD
IL31RA
SPG7
VPS25
RAD21
SQLE
RGPD8
RGPD5
CFAP20
AP5S1
RGPD6
TNC
SMIM20
MAZ
CLDN16
CCNY
PTPRF
TRAPPC3
GORASP2
EIF4A3
NUMBL
IL4
MIDN
ID1
ASXL1
H3C3
H2BC3
SNAPC5
NOL12
CXXC5
MRPL11
H3C15
H3C14
H2AC19
H2AC18
PSMA3
PCOLCE
TMEM41A
FUCA1
KCNN4
REEP4
CXorf38
METTL25
CCDC59
LDHA
NUP54
RPS20
DPEP1
CAT
TRIM41
METAP2
EML2
ETFB
HSPA8
C8orf58
EDEM2
CCAR2
PPIL3
NIF3L1
TTI1
RPRD1B
CHD1L
IQCN
PRKAB2
TAMM41
CLK1
NABP1
SECTM1
NR2C1
FOXJ3
SMPD1
LOXL4
SDC4
RPL23A
RAB34
CCDC174
NAV2
TBX6
RDH5
BLOC1S1
YPEL3
SMG9
GINS3
ZNF239
TRIM16L
FBXL16
USP42
TES
PLAAT3
CD274
LTA4H
PFDN5
MYG1
PSMB2
LSG1
CDH18
GDPGP1
CIB1
ELF2
NAGK
H3C13
H2BC18
COL21A1
GPAA1
EXOSC4
NANP
MKLN1
MAP3K14
COX16
USP32
LIME1
SLC2A4RG
CLDND2
TBCEL-TECTA
TBCEL
MYBPC3
POLR2C
VWCE
PCMT1
NCOA3
TNRC6A
RNF6
EXO1
CDKN1A
PLK2
FSTL3
RAD54L
LAMA3
OLFML2A
ARNT
DTX4
SOD2
RBBP5
H4C4
NDUFB7
FAM133B